Contig Data
morexGenes
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Map Locations of contig_60182 (6329 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_60182

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71615 5 2093 bp MLOC_71615.2 Available Available LOC_Os01g70970.1, FRAME:-1, EVALUE:0.0, 13101.m07727 protein protein kinase, putative, expressed





CDS Structure of MLOC_71615






Contig Sequence (6329 bp)

>contig_60182 6329 assembly3_WGSMorex_rbca.fasta
CGTATATAGACACCTATTGAAATCTCTAAAAAGATTTATATTGAAGAACGGAGGGAGTAG
ATACGAAGCAAAATGAATGAATCTACATCTAAAATATAACTATATACATATGTATGTAGT
TTATACTAAAATCTTTAAAAGGTCTTCTATTTAAGAACGGAGGGAATACATACGGAAATG
AACTCCATTTCGTACAAATGCATCAAACCATTGCTTCATGTATGAATATCTCCTTTCCGC
CAACAAAATCTCAAAGGAAAAGTTTGCAAGGCAGGAGACCCTTTTTAAGAAATCCAGGCC
TCCATATTTTATAGTGCAGCCGTAATACCGCTGTTGCCCTTCCGTTTTTCTCATGGAAGA
AGAACTACATTATCATTGCCGAGGGAGAGAGAACTCAATATCTCCTGACTTTTGTAGGAG
TCTCTACTAGAGTATAGAGAATGTACACAGCAGTTGTTTTATATGCAAATGTAAAAAACA
AAGTGGACCGGCTAAATGTCAGTTGCCTGAAAAAAAACACATACATCACACGATTTCGCC
TTCGTCCCCATTGCCGACAACCGCTTCCATTAATGAGCCGTCCGCCTCCATTGACCTGAC
TAGCACCCACCACTTGCAGCCGACGTCACCTTATCGTCCCGCGCTGCCTATCCACACCCA
AATCCGTCAACCCTCTTCTCCCCCTTTTTTCAGCGCCGGCGGAATCCTCTTGTATCCTCA
CCAATATCCGACAACCCTCGGATTTCCCGTCGCCGACGACGCCACGTCTTTTACAATTAA
AGCTCGATGCTTGGGGAATCGGACCAACGCACAATTCATTTTCATGCAACTAAAGTTTAG
GAACCGTGAAACACAAAAATATCGATCGTGGCAGCAAATATCGGATGATCATGACGTGAA
GAGCTGGCTCCCGAGGGTGATGATGGCGGTGCCGTCGCCCATGACGGTCGTTAGTGTCAT
CTCCTTCTCCAGGATGCGGTCAAGCTCCGCCGCGACCAACCGCATCTTGGGCCGCCTCCT
CACCGCCGACGGGCTCAGACACTGCAACGTCAGGCCGACCAACTCCTTCATGCCCTCCGA
GGTGAAGCTGCCACCAAGCCTCGGGTCCGCCACCTCGTCTCCCGATGCCTCCAGCTGACA
CATGCAGCAGGAAACTAGCGTCAGTATAATGTAGTTGGATATAGGGTAATCATCTATAAC
ACTAAACTTCCTAGTTTTGAAAAGCCCAAATTCAATTGAAGTCTTCAATTAAAACTGGGT
CACCGATTTTGACCGGGTCAACAATTTTTCAAAGCTCACTCATTCAATCTTTTTTATATT
ATACACTATGCTTCCTAATCTTTAAGGCCTCAACATGTTCTGTAATTCTTTCAAGTTCAG
GACAAAAAAAATTGACATCCCATCCCAACATTAAAGAGAAAAAGTTTGAAATTTCATTTC
ATGATGAATCGAAAAATTTCGATTGAATATATTTATCTATAAATTTTATCAAACATAAAC
TGTTTACCATTTCGAAAAAGTAATACACCTTATATTTTCGAAATTGGGTGATTTTTTCTA
AGAAACCCAACAACACCAACGGCACAGCAAAGCGCGGCAAGCCCTTCTAGTTCTGGATGA
AACTTCAACTAATAATACTTTTGCCAGAAGAAATCTATGATATTACTTTTGTAAAAAAAA
ACTACGAATAAATAATTTCGGAGTACTATATTTAGTTGGAATGAAAATATACTGAAAATT
AGTGCCATCACTGATTGTAATTACCCAATGAGCGAAAGATTCAGTTGATTCTGGACAAAC
CAAGCTGGCGGCCTCCCTACCAGTGATGAGCTCGAGAAGAAAAACCCCAAAGCTGTACAC
GTCGCTGCTCGCAGAGAGCTGTGCCAAGGAATGTGCCCTGAGGACACACGCGTAACGGTC
AGATACATAAGAAATGACCTGCAGAATATGTTGTTCAGGGATCAGACTTGAGAGCTTCAG
ACAAGCTTACTCTGGATCCTGGTAGACGCCGGAACGGAACCCATTGAGCGGCGAGCCGGG
GTCCTCGAGCCCTCTGAGCAGCCGGTCGACTCCGGCGTCGGACACCTTGGCGATGAAGTT
CTCGTCCACCAGCACGTTGCTCGTCTTGAAGCCCTTGTGGATCAACGGAGGCGCGAGGCT
GTGCAGATGGTCCAGGCCTGCGATGCAGTTCAGAGTTCAGATACTCTGTTTCTGAAACAA
GCACGAGTGCATTGTGTGATAATAAGTTTTGCGTTACCACCACCTTTGGCCGCTCCGATG
GCGATCGAGAGCCTCTGCTTGAACTCCAGCCTTGTCATCGACTCTTTGCCGGTATCTGTT
AAATTGATTTACCATCTGAGCATTAGCTTTTAATTGACACAGTTTCAAAGGGACAACATG
CCTGGAATTGGTCTGACAGGAATGGAGTTGTGTAGCTGCAAACTACCGTATAGATGGCCG
CAGACGCTGCCGTTGGGCAGGTGCTCGAAGACGAGCATCTCCAGACCCCCGTCCTGGCAG
TAGCCGATGAGGGTCACCACGTTCCGGTGCCAGATCTCCGACTGCCTCCTCACCTGCAGC
AGCAGCAGCATTGCACAAAGGGTGAATTCAGTCAAGTACTATAATTCACGAAGACTCAAG
TAAGTACAGAGGCAATTACTTCGTTGTGGAAACGAAAGTCTGGGCAGTTGAGAAACTAAA
TGACGGTTCATGAAGTAGCAGAGGAGGCTCAGATGTTTGTAGGTACCTCGTCGACGAAGT
CCTGGCGCGGCGGGCCGACGCGGCGCTTGATGGCGACGACGGTGCCGTCGAGCAGGAGGC
CCATGTAGACCTTGCCGAAGGTGCCGGCGCCGACGAGGTTGGCGTCGCTGAAGTTCTTGG
TGGCGTGCGACATCTCCTCCAGCGTGAACCGCCTGGCGCCCTGGTAGTCCGGCGCCGACG
ACGTGCGGCCGCACCTGCCCCACTCGGCTGGGACCAATCAACACCTCGGTCACGCACGGC
ATATCTATGCAGAGATACACTTGCAGCAGGACATGCATATGACTTGCTAGCTAGTGTCGG
GTAAGTACCTAGCGTGGGGGGAGTTTCGTCGGAGGCGGTGTCTGAGGTCCGGCTACGGCG
CGCCCCGAGCCGCCACCAGCAGAGCGCGGCGGCGACCGCCAGCAGCACCAGCGCGGCGAC
GGACGCGGCAACGCCGGCTACGACCGCGGTTGGCAATGCCATGACCCGGGCGACCGTGGC
ATCCCTGCGCGCACGCAAACCAAGAAGCACTGGTTCACTCACCGACCAGCCGAGAACCTC
GGCGGTGACCCGAGACCGTGTCACCGTGAGACTGAGAGCTCGTGCTAAGCTGCTGACCTG
GGAAGAGCGACGAGGGAGGGCCGCTATAGCTTCGGCATTCATGAATGCGGCGACGGAGCA
CGCCGAGCAGCTCCTGGAGCAGCGCCGCCCGACCGGACCAAGTCCAAGAAGCGCACGTAC
GGAGGCGGGGCGAGACGACGGCCGGGCCGGGTGCTTTAAAGAGGACGAGGAGAGCAGGAC
GCAACGCGACGCAGCTGGGGCTGGCTAGCTACTGGTAGCTGGTACGCAATCAGAGGAGGG
GAGGAACAGCGGGGAGCAGAGCAGCTAGGCTAGAGCCCGAGAGCCAGGCCAAGAAGACGC
AGCAGGTCAGGTGGTGGTGTGGGCGGGCGATAGGAGGAAATGAATGCACATGGCAACTTG
GACGCCCGCCATGCCGCGCCGCGCCGCGCATGCACGTGGAGACCTTTCACCGCGGCGGTG
AAGAAGGTGAAACGAAAGAACAGGTCGTCGTCTTCTTCCTCACCGGGGGAGCCATGGGCA
GCTGGGAGCGGGACCCGGTCAAGCGCGCGCGGTGGCTGTCCCGACCTTCGGCTAGCTGTC
AACGTGGGGCCTCGGGGCGGCCTGCCTGGGACGGTGGGACCACCCACGGGCCTCTTTGAC
CCGGCTGTGATAGGCTGGCGGCCGGCCGGCCGGCGGGAGCGGCATGACGGCGGCGCAGGG
AAGGGTTGCCTTGTGTTTGCTACCTGCTTCCACATACTTCTTGTACTATAAACTAGTGCA
AATTGGGAAGCCTCGTGAGAGCCAGCATGTATATTCGGTTGGTCGTGAAGATACTTGCTT
TATATTATTATTATTACAAAAAAAAAAGGAGGATCCCGTATCGTGCCAAGTAGATTGTCG
CGTCATCACAGATCACGCATGCCAACCTCGGCTCGACCTTGAGGAAAACGAGGAGCTCCT
CCTTCATTGCTTCAGTCCAGTGAGACTTCATAAAGAATCAGCCAAATGACATAGCATGTA
CGGAAATTTTGCAAAGAAAACATGGACTTCTTTTCTTGCCTGAACCATACAAAGAGACAT
GGGCTTGCAGTATAAACAGATCTAAATGAACCATACAAAGAAACGTGGACATTTTTTTTC
CCTGAACCAGACAGCAAGCAGATCCAAATGATTCAGACAGCAAGGCGCAAATCAACACAA
CTCTTTGCAGGCTAGCAGCAAGGCAGATTTGCTTGCAAGAAAGGGGTCCAGTTAGATAGT
CTTCCGTGAGACGAGATCCAAATCTGGATGCCATGCATATCGATTATTATTTTATCAGAA
TTTGCTTGCCCCATACATGCATGCGCACGCATTACATTACAGAAGAGTGTTTTAATTTGA
TCTGAAAACACAGCTCAAACATGTTGCGTTTCCTTTAATCGCATTGACTAGTTTTCCGAG
TTGCTTGACACACGCATCACCAATTCAAGTACTTGTTCATAAGAAAACAATCAAATTAGA
CAGTGATCTACGCCGGTGCGCCGGTCAAAACTTTCGGCCGGCCGCGCACGGGCCGTCCGA
GCCGCCAGCTGCACGTGGGACGCATCGTTAGATCTTCATGCAGTAAAAAAATTCGATGCA
ACAAATTTCGTCCATGATACAGCAATTTTCGTCCACTGTTGCAACAAAAATATGGTTGTA
GCAAAAAAATATGAACGTGGTCGTAACAAAAAACCAAAGTTGATGATGCGTGGTAACAAA
AAAAAAGGTTGTAGCAAAACAATCCTGTAAACTCGGGTTGCAACTTTGACGAACGTGTAT
GCAACTTTTTTAGTGAACGGTTGCAGTAAAAAATGATACCGGTTGTAGCAAAAATTAACA
CGATTGTAGCAAAAAAATTACCGATTGTAGCAAAAAATCCGACAAACTGAGGTTGCAACA
AAACGTATATGCAACTTTTTTAATGCACAAAGGTAGCAAATTTAGACACAGGTTATAGCA
AATTTAAACGACCATTACAGAGGAAAATGTTGCATGGCCATACACGCGACCCGCGCGTGA
GACGCGTGGGCAGCGATGAGCGCTTCCACCGACACGCCGAAGGAAAACGTTGCCCAATTA
AATTCGGCCGGTCAAACCGTCTATTCTGTTCAATCTATCACCGTACGGTTAGCTCAAGTC
CAAGTGACCATGACTGAGTTTTCTACACATTTATGTTTCAGACTCTCATGTGTATATTCG
TGAAAGCAAAGTCAATTCCGAGTTCCTCAACACCATCTATATCTTACTAGCCTCCAGTAG
TATATAATATCACTAGTAAGTAGATCATTGTACGAATACATGTACAGGTAGATCAACTTC
ACTGAACCTGGACTGCTCATGGAAATGATCTCAGATACACTGTTCAGCTCTTCTCCTCCT
GATAGCATATATCATTTGAAAAACATCTTCAGGGTGCCCAAGTACTGCACAATTACCAAA
GGGAACAGAAATAAAATAAAAAAGAGGGCACATGCACCATTCATTCATGCTCCGGCGCAG
GTCAGAATCCAATGACTGTCACTGGAAAAGAAATATACTCAGGACAGCATGCCAGCTTCC
AGCCTTGATCGTTCAGAGCTGTTGGATATACTAGATCCATATGCAGTAGACATTAGTTAA
CAAGATGTTGTCATCACAATTATATTAGGCAGCGTGACAGTCTGAATAAACATTGGGAGG
TTTGCTGGACTATAATTAGATAAGGATCCCAACTAGGTAGTAACTGAAAGTCAGCACAAC
AAATCTTAGGTCATTCCTACCCGATCCTCAATAATCAGTTAGATGACTAAAAACCAGTTT
TACTACTCTAATCGGCACCTAGCTGATCCTCAATTGGCGTTGGTGGAGTAAAAATTATAC
TCACCTGACGTTGATATCTCTATATTCACTCCATCGTTCACTCCGCCTCCTCTTCCACTC
TGCCTTCCCTGTTAAATTGTGATCCAAATTCTACCGTATTGGACTAGACGTAGTACAAAC
GGTGTGGGCCTTTGCGTTGGTACCGACGC