Contig Data
morexGenes
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Map Locations of contig_60149 (5070 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_60149

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71601 1 2903 bp MLOC_71601.1 Available Available LOC_Os07g12320.1, FRAME:-3, EVALUE:0.0, 13107.m01270 protein WD domain, G-beta repeat domain containing protein, expressed





CDS Structure of MLOC_71601






Contig Sequence (5070 bp)

>contig_60149 5070 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGCTCAACGCCTAAAGCGCAAGGCGACGCCTTAGTTCACTTTT
GAAGCAGCACAGCACAGCAGCAGAGCAGTGAGGGGCGGAGAGGAAAGAGACCATGGGCAG
CAGAGTAGTCGTACTTTGTTGCCCTGCTGGGGGAGGGATGCGCCAGGGGAGGAGAGGCCT
GGAAGCTTCGCCGGCAATGGAGAGGAAGCTGGGCGAGGGAGGAAACTTGTCCGGCGGACA
GGATCTGGCGGAGGAGGGGCTGGCCACGTGAGAGGAGAGAGCTCTTCTCTCTCTCTCCCA
GATCGATTCCTCTCACGTGTGTGTTCCCCACTCTCTCTCCCATCTATTTCACCTCAGATT
GCCCCTCAATTTCTTTCCAATCCCGTCCAATTTCAGTTTCCCGCCCCGCCCCTCGCCAGT
TCCCGCTCGACCTGGACCAGGGCGCCCAAATTGGACCAGAGCAGCGCCTCCCCCGCCTAG
GCGACGACCTGAACGCCTCAATAGGCGAATCTGAACAGTGAAACCATCAATTTCTTCCAG
ACTAATGTGACCATTTTAGCTCTAGCACGATGATCAGCACATGCCACAGGGTCTATAAAA
ACTTAGAAACTGAATGGTTGATTATATTTATCTGGAAGATAAGCACAAATATGAGAAGCA
CAAGGAATAAGCGACCACATCACTTGAACTGAATATCATTAAAATAATCATACTAGAGAA
ATAATCTGAACAAAAGTCGGGATTATGGCCATGTGGTAATCACAGAGCATTGAATTGAGG
ATTGAAAGAGGTAAGAATCAAAGTACCTGAGAGCCGGATGCAAGGTGAAAGTAGAATGAT
TTCGGATGGATTAAGGAATGTGAAAGAAGCAGCCAACTTCCGCAAACTTTGTCATGACAG
GAGACGGAATGCAAATGTCCAGAACTGGTTTGACGATGCATTACAAAGTTCACGAAAATA
TCAAGACAGACCTGCAAGAAAAATGACAAAGAAAAAGCTCCAGTCTCTGAAACAGCAAAG
CTATCAATTCCTTCCAGATAAATGTGAGCATTTTAGCTCTGGCATGATGATCGATCTCAA
CTTGGAAACTGAATGATTAATAATATTTTTGTGGAAGAGAAGCTTGAGGAATAAGCAACC
ACATCACTTGAATCGGTACTGAACATCATCAAAATAGGGGCACATATTAGAAGAACAATC
TGAACAAAAGTCTCTAGGCACTAGGATCTCACTCAGTAGAAACAAGCCAAAATTTCACCA
ACAAGCAAGCATGGTCTATGAAGCATAAATGAACATACACGAGCACTTATGGCAACCCAA
ACAGGTAACAAAATTCTCTTTTATCTGCTCGCAGAAAGCGCAAGCATGGGAGATATCATC
CCCTGGATCTCCTGCAGGGTGTGCTGTATCTGAATCTCCTCCATGACCATCCGCTTAAGG
TTCCTGACGCACCCCCTCAGCTTTCCCCCATCCTCGCTTATGATATCCTCAGCACGCATC
TCCAGGACCTTGTTCGCCACCCCAAGCAACAGCCTTGCATACCTCGGCAGGGTCGTGTTG
CGATGCAGGAAGTCGAGGAGCAGCCCGAGCTCGGCCACGTCAAGATTCCCGATGCATCTC
ACCAGCTTCCTCCTCGCGACCAGCTCCTCCATGACCGCCACGACGCTCCTCGGATTGTTC
TTGGCTAATGCTGAAACCAGAGCTTCCTTGTGCCTGAACTTCCTCAGCAGCTTGTCGTGC
TCTGCGAACTTCACCTTCTTGGGCCTTGAGATCACGAAGTCGCCCTGCTTGGCCTTTTCA
TTCTGACCACGGAGGAAATATCTGTAGTAGCTCGGCTTCAGCGCCTGCTTCTCTGGCTTG
GGCGTCGTCCAAGCGAACTCGCTGCTGACAACCTCCTCTTCTTCCTCCTCCGTTGCATTC
TTCTTCCTTCTGCGCACAAAAATGTCTCCCTTTGAAGATCCGGCAACAAGCACCGTCCCA
CACGGCGAGCAAGCCAGGGACAGCAACTCCTTGGGGTACCGCATCGAGTGTGTCATCTTG
AGCTCCCCATAATCAAAGCACTTCACATATCCATCACTCCCTGCGCTAAGCAGCCGAGTT
TCCCCGGTGGTGCCCATCTTCCCGAGAGCGAGCGCAAAGACTGTCTTGACATGGCTCTCC
ACCGAGTGCACGAGCCGGCCACCACCAATCACATCCCAAATCTTCACCGTGGTACCTCCG
GCCGTGGCCAGCAACCCGCCGGACGGCAGGAAGAGCACGCACTCCACCGAGGCGCCATGG
GAGAAGGACAGAGCAGGAGCCTTCCCCGTGCGGGCGTCCCACAGCTTGACGCTTTGGTCG
TAGGAGCCGGTGGCGAAGAGGTGGTGGTCGACGGGGGACGGCGCGCCGGCGCGGATGTAG
TCGCGGTGAGCCGCGGGGACGGTGAAGACGGGCGTCTCGGAGGGGACGTCCCAGTAGGCG
AGCAGCGCGTCGTTTCCGGCGGTGAGGAGGTGGACCTTGTCGCCGCCGGCCTCCGGGTAG
CAGACCACGCGGGTCTCGGCGGTGTGGGCGGAGAGGGTCCGGAGCGGGCCCGCGGTGGGC
TTGTCGACGCGGAAGACGCGGACGACGCCCTTCTTGTCGCCGGCGGCGAGCAGCGCCCCG
TCGCAGCGGAAGGAGGGCGAGAACGCGGCGTCGTCCTTGGAGACGGTCACCTTGGGGCGC
GGCGCGAGGGGGTCGCCGGTGAAGAGGTGCACCGCGGAGGACCAGGCCGCGGCGAGCGTG
GGCTTGGCGTGCGCCGGGGAGAAGGCGAGGTGGGTGACGGAGTAGGTGGAGCTCGTCTCG
AGCTCTGAGGAGCGGAAGTTGCGCCAGTAGGTGGCCTCCGGCGAGAGGCGGTTGGGGTTG
CCGTGGGACGGGAGGAGGGAGGTGTGCGGCGCGGCGGGGAAGAGCGGCTTCGAGGTGTCG
GCGGCCATGGCGGCGGCGGTGGGTGGACGGACGGGCGGCGGCCAGGCGGGAGAGAAAAAC
CCTAGCTTGGTGGGAACGGTGGGGATGGAGAGGGTTTATGGGTTCTGTGATGGGCCGCGT
ATGAAAAAGGCTTTTTCTTGCTCCAATTCGAGAATTTCGACCCAGTAGAACGAAGTGTAC
GAGACTGATCTTCGTTACTTCCATCGAAAATGAGCCCAGTTTCTAAAGGAAAAAATGAAG
ATACGGTTTTTTTTAGATGAAAGAAATAACATTTGAAACCTCAACAAAATCTGAAAAATT
CAAAAGTGGAATATTTACATGTGAATACTAAATTCCATGGATACGTCGGCATAGATATCA
TTTATGGAATAAGTTCCCGTCATTCTTCAATGCGTTAAGATCCATGTGTGGTACTAGCAA
TTTTTTTCATTCCACTACATATACTAATGTGCATACCGGGTTTTTTTTTCATAAATATAG
GTAAAAATACATTATATCAATGCATTTTAAAAACTATACACTGAAATTGAAAATGTTTTA
AAATGATTGAAAATTGTGGTAAAGGTTTTCTGAAATTGAAATTTTGTGTCACTTTTTGCG
GAATGTTTCTTAAAATAACAGAAATATGGATAAAATTATATGAATTACCATGATTATTTC
TGATATATACTTGTAAAGTTTTGAAATATGTTTGAACTAATTGAAATTATGTTTCTAAGT
TTTGTCTAAAATCATTTCCAAAGTTCAAAACAGAAGACCATGTGCCACTGGAATCTTGTA
CTTATAAATAGTTAGTCCCCACTATTACATTTTTGCTGCACATGTGTTCTTCTAAATCAC
TTGAATAATTGATAGCCATCCGATAAAAAATGTGTGGGATCACAAGTCATGCATACACTG
ATAAGTTGCTTATTTTGCGTTAATTTATCCATGCAAACCATGCCACCTAATCAAGTAATG
CATTTTTTCCTGAGAATCAAGTAATGCTTGTCAGCCACAACTTATTTTTTTGTGCGTCAG
TTTTACGTCGTCATGAATAGTATATGTGATGGACGCTTAGAGCAAAATATATGTAGTCCA
TGCTTGGTGTTGGATTAAGTACAAGTCAAGATATTTTCTTTTTGTAAATCATTTTATCAC
ATACTTGTAGGTTTTATTATTTTGAAATAGGTAAACCGATAACACTTTTGCAAACAAAAA
ACAATAGGTTAATCGTTTTAAGCACCTCTTTATGCATTTTATTTAAATACTTCCTATTGC
GACACGTGGGGCATCATCTAGTATCTAGTATTACTTAGTAGGTGACGCACTAAACTATTT
ATCTTAACATGCAAGCCTGTCACATCAACATGCATCATGCATGGAAAAGGCCCACCTCGA
CATGCAATCATGCATGCAAAAAGTCTCAAATGTTTTCATTTTCTTATGATACTTATACTC
AAAACATATTTTGTAATTATACAATAATCATATGTATTTTAAGCTTTTGTTATTGTACTA
TTAATCAAAATATTCATCTTCGTATAACCAAATATCTTTAGAAAGTATTGAAAGCAATTT
ACGCAGTAATGCACGGGGTATCACCTAGTTTTTGAAAAAACTGAACCCAACAAAAATCCA
GAATTATTTTCAGTTTTGGAAATCCGTTTTGTATTATTTTGATTTTGAGAAAATGTGTTT
ATTAATATTATTTATTATTTCTAATATATGAGTATGGAAAAGCAAATTACATATACTGAA
TGTGTATCATCCAAAATACCAAGTAGACTATAAATGTGGTGGCTACAAATTGTCAAGGGA
GCCAAAAAAGTGACTTGAGCCGAGCTAGACCATTTTGCTTCTCATCCGTTTCTAGGTGCT
CACTGGTATATAGCTTCATGAAGGGTCGGACGGAGGAAGGTTGCAACGTTTCCCCCACCC
ACTTCACGCGGTGGCATCATGGCTTTGGGCTATTGCTGCGTAGACTTGCAAAGGAAGACC
GTCGTCCAACCTTCACAATGATATTTGCTCTGACAGCCCGGTGCCGACGTTTCAGAAGAT
TCCCCTTCTATTCCGTTATCATCGTGTGTCTATTTTATTTTGTCNCATCATCATCGCATC
ATGCACGTCATCAACATTGCATCGGCACCC