| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_60112
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_71588 |
7 |
2043 bp |
MLOC_71588.2 |
Available |
Available |
LOC_Os08g06060.1, FRAME:-1, EVALUE:0.0, 13108.m00602 protein CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
CDS Structure of MLOC_71588
Contig Sequence (9318 bp)
>contig_60112 9318 assembly3_WGSMorex_rbca.fasta
ATATCCATCCTTGCGAAACGACGAGATGCGCTTCTATCCTTGTCGAGGCCATCGTGCCAA
AAATAAGGACAAAATCGCATCTTGGGCGTTACAGGGAGGCCCCAGGGTCCCACACACGTT
TAGTCTAGAGTGCATGTGGGGCCCTCCTAGCTCTATTTCAGCGGCTCTTCTTACCTCACC
ATCGACCTTTCTTGCATGATGATGCAAGAGTATTAGTCAACACTAGGGGGTAAGATTTGT
AAGTAGTAGCTATGTGTTGTGTCTCTTTCTCTCTTGGTCATATGAGCTGTTGAACACAAT
TGTGAACTTGGGCATTATTAATGCAGTTAAACTATATGATGTATCTCTGATTAAGAATTT
CTTTATCTGGGATTGAATCTTACTCATATTGTGTATTGAACTCTGAGAATCATGAAATCA
TATGCCGTTTGTTTAGTATTCTTTTGGGAGACACCTCCGGTGACAATGGTGTGCTCATTA
GATCTAGATTAGAAAGACAACATTGGGTGCGATTCTTTACCATGCTTATGGTGTCTCATC
TTATTTTCATTCAATAAAACTAAAACCTTGGGTGTGATCCTTTACTACTTTTTGTGAGGT
TATGTCATATATGTTGATGAAGTTATTAATGCTGTGAGTTGACACTAGTGAACATATGAA
CCCTAGGCCTTGTTTCCGACCATTAAAACCTCGTTTTACTCATTTTTGTACAATTTTATT
TTGCTTGCTTTATTTATTCCAATAATATAAAAACACTTATATCATTTAAATTATAGATAT
GTTGGTCAAATTAGTGCAACTATGCAATTGACAACTTTGTTAGGTGTGTTGGGGACAGAA
TAGACTACATATATATTGATTGCAGGGTTTAGAACACAATAATAATAAGTAACAGTCGTT
GGATGGTGAACAACACTAACACCGAAGAGTGGCCGGAAACTGTAATACCATAGTCTATAG
CTCAGGTCTTGTTAAGCATACAACCAAAGGGGGTAGTTACAACCTAACGTGATAAAGATA
AAGGCCCCACTTTTTGGCTAACAAATTATTGATCAAGCGTTCATGTTTCCTAAATTTCCA
GGTTTTTGACATCATGGTGTCATCAACAAGCCGTAGGACAAGATGCTTAGACCTGATCAC
TGATTACTCTGTACATGGTGCTGTCAGCTCATGTATTTCCCCGCGGAGCTGATAGATTTG
CCATTTCAAATTGCTTCTTTTTCTACATTGGGACCTTTTCAGTGAATTGGTTCAGGGTTG
AACTTGAGAGCCTCCCTCCAAATAAGTTCTTTGATATCTTCCTCAGTAAATGATGGCTGC
TCAAAGTCGAAGCTGAAAGGCGCTGGGCAGACAGGTTCATCATTTATCTCATGAAGGGAT
GCTAAGTACGGATGGCACAGAGCCTCATCAACTGTAATGCCACCAAGAGAAAAAAAAAGG
TTAATCTTCCAATAGGAAGTTCCTCATAATATTTCTTACATTAACGGTTTAATGGCTTAA
TTATCATAAGAAGTGTCATTTCAACTTGGTTTTAATAATTCACACACGATTCTGGAATGA
TGGTTCACATTATTAAATTTGTCATTTTGCAATCAAGCAAGATCATGCTATGTTGCAAGA
TTACCAGTAATCCTCTTGCTCGGATCAAACACGAGCATCCTCTCAAGCAAATCCATGGCA
CCAGTGGACATATTGGGGAACCGTGAACCAAAATGTTGTTTCGGGTATTGAGGAAGAGAC
CTCACGTATCTGCGGGCATTATCACTTCGAAGAAACCCAAGGCTCGTATCATCTGGTGAG
CCTATCAGCTTTGGATGAAGAATGAATCAGGATTACAAACAGCATCGAGAAGAATTATTA
GACATTTCCATTTAGTAGAACAAGAGAAGATGTTAGTGCATCTAGAATTATCACATGCTT
GGACCAAAACATTAGTCGGAATGAAGGCATATGCATGAAGTATCATGCTACACCAGATAC
CAGTGTAAGCTTCAACCTATGTGGTGTAGTTGTGCTAGTTGAGTTAGTAATCCGAGAGAT
ATAAGCATGGCAAAAGCATAGCAGTTGGAACCTATGCTAAATCAGAACTGACAATCATAG
GGTCAAACACTGAGGCAAAAAGAGAGCAGGAGAATATACAAAAATAAGAAAAACGAAACA
AAAGGGAAAAAACAAATCTTGAGTCGTGTAGTAGACTAGTAGTGAGTGGCCATACCTCAG
TAATTAGCCTCAGCTGATGAACATAATCTTTTCCAGGAAACAGTGGCTCCCTCATAGCAA
TCTCACCTAGGATGCAACCGACTGACCAAATATCAATTGCTGCAGTGTACTCCGAGCAAT
TGAGGAGGAGCTCCGGCGCCCTGTACCACCGAGTAACAACATACTCCATCATGAAATCAG
TCTCAGTGGTGGTCCTTGCCAAGCCAAAATCTCCAATCTTGAGTTCACACTTGGCATTGA
GCAGCAGGTTGCTCGGCCTGAGGTCCCGGTGCAAGACCTTTGCTGAATGCACGTACTTTA
GTCCTCGGAGCACTTGGTAGAGAAAATACTGCATCATGAAAACGTTAAGGCGAAAGGAAA
GCTGACTAATTGTGGAATGTTTGGACTGATGTTGATGAAACGATGGAAAGAACAATGTAC
ATACCTGACAGTGATCATCTGTGAGTGGCTGGTTTGATCTTAGAAGGTGGTGAAGATCAG
TGTCCATCAGTTCGTAGACGATGTAAACATCGTTGAAGTTCTCCCGCCTTGGTGGGCGTA
TGATGTCCTTTATTGAAATCACCTGTCAAAAGTCAGACTTTGTCATGGTCATACCATCAA
ATTCAGGTTCACACCATATATATTTTCGACATCATAAGTGGAGTTAACCAACATCAGATG
GACTTATGTTGCAAGATAGTTTGAAGTTTAAACACAGTAGCACAGGTAGGGAAGGCAACT
TCAAGTTTTGTCACATATATCGTCTGTATAGTAAATAAATAATAATAGGCAATTCTGGCT
TTGAAAGAAAATCACCAGAATTTCCGGCAGGTCTTCTCAGGACGGCTTACCTTTGCTATA
AACTACAGAGTTAACCATGGTCAAATAGAAACCACAAAACATTTCAGATATGAGCATGTG
AACCACAGAGGTTTATCACAAGGCGGCACAAGAGAGAAAAGGAAAGATGGCTCACATTCT
CATGATTCATGTGGCGAAGCAGCTTTACTTCGCGCAAAGTGCGTTTGGCATCGATCTGGT
TGTCAAACGCATTACCAATCTTCTTGATAGCGACCTCCTCACGAGTATGTGCATTTACCG
CAGCACTGAAGAAGAGCACAGAGAAGAATTTGTCACCACAGGCTCAAAATCAACTACAAA
CAGCTCTTGCCTCCTTTTAGTATTAGGTATTGTTGCTTAACGGTTAACTATTACTGGTTT
ATTAGAAAATGCTTTATGGTTCAATACTATATACTCCGTAACTTTAATCAAGACTCACTT
TCAGTCGTATATACTATGGTGAACTCGCAACAGGATCGCAAGTAGCTAATCGAGCAAAGC
AATCCATATTCTGAGGTATATTGAGGAATAAACGCAAGCAGATGCAGCGCATGCATGATG
TACGTACCAGATGATGCCGCAAGCGCCGCGGCCGACAGGTCGGATGGGTGGGACGTACTT
GGCAGAGACCTCAAAGAGGTTGCCGTAGACGTTGTACTGCACGTACCTGCCGCCGTGGGT
GAGCGTGCCCTTGATCTGCGCCTCCCCGCCGAGGCCATGGCCGCCGCCGTGGCCTCCTCC
TCCTCCTCCTCCAGCCCCGACGCCTCCACCCTCCATGCGCATCGACCCGCACGTCTGCGC
ACGAACACCTTGATCGAGGAGCTAACGAAAGAAAGAAACGCACGCCGCGCAGAGGAAGAG
AAAGGGAGAGAGAGAGATCGCTAGCTTGGTTGGATGGATGAGGGAGGAGATAAGGCGGGG
AGAGCGTTGGGGAAAAGGGGAAAAGGAGGAGAGGAAGCTTTTTGGAGGGAAAATGCCCGT
GATCCGGCGAGGAGTTGGTTGGTTGCTGCTCCTGCTCCAGACCATTCCAGCCTCCTTTTT
CTCCTCCCCCTCCCCTTGATGAGCCTTCACTTCTCTTCCCTTGTGCATGGCAGCAACCTG
CTTTGCTTCTTTCTTGCATACAGTAATGCTTGGCTTTCTTTTTTCTCGGCTATAGTGGTC
GTTGCAACTTGTAAGAGCATCTCTCCAGCTGTTTGGCTCTCAATGTACTTCCACGATAGT
GTTTTTAACAACGGTGTTATTTTCGTAATGGGGCGAGCGAGTTTCCAGCTGCGCCCCCAA
GTTTCGGTCTCCCAGACGCCAAGGTTTTTAAATTATTCTTTCCCACTGTCAAAAAGACAC
CATGAGCTCGACGATCATCATACCACAAGTGTCATAGTTCGACGATCAAACACGCCAATA
GTTCGGCGATCAAAAGGAAATGATAAAAAACGGATCAAACGTCCGGCTCGGCGTGGTGCG
GCTCCTCTACCGTGGGACTGGCCGGGCTCGTCGGCGGGGTAGTCGGGCTCATCTTCGGCG
TGGTCGGACTGTTCGTCGTTGGTGTAGTCGGGCTCGTGGTCGGCGTGGTCTCTGCGTTCG
GGTTGGGCGCCGTCATGGTCACCGTTGCGGTCGCCATTGTGGTCGCCTCCGGCGCTGGCA
TCTGGCTTAAGATGAGGTCGCGCTGCACTATGTACCACGCCTTCACTGTCTCGTCCATCA
TCGACGTGTCTGCCCCCATCAAGAACTCCAGGTCGATGTTCCTCTTCTTTGTAGCGACGT
TGATCATCAACGTCGACCATCGCACGTCGGATTTCTCCTCTCTCCTGGGAGGGCTGCTCT
TGACGTCCGCGATGCATTGCTTGATTGAAGCCTGCAAACGTTGGGCAGCGGGCCCCCCAT
CCCTCACCGTCCTATCCTTTTTGGTGCCATCTCGGCGCCCTTCTGCCACAGCCGGGGTAG
GCGCGTCCGGGCTGTAGGTCTCCTTGGCCTTGTCAAGAGCAAGCCGAACTTCCCTCCACT
TCTCGCACCAGTCGATCCTGGAGAACATGTGAAGGAACCTGAACTCTTGGTCCTCGTTGT
CGGCGCGATACATGGCGAACATCGGAATCATCTGCACAAAACCGCGGACAAAAAATGTCG
GCAAAGCAAAGGGTGACGCGACAAACTTGGGCCGGCGAACTCCATACCTGACTCTCAACA
TTGGTGCCGCTTTTTGGGCGAGGAGCGACCTCCTCGATGATGACATGCCACTTGTTGCAG
GCCATCTGGATCGTCGACCAGCGGTTCTCCATGGCCTTCTCGCCGCGGTTCATGTGGATG
TTGGCGAAGTCGGGGTCGACCAGCTTGCGTTCGTCGAACGCCGTTTTAATTCTCCCCCAG
TACGTGTATGTGTTCTGATTCGAACCGGTGATCGGGTCGATGCTGACGGTCTTATGCGCT
TCGACAAGGCACTTGTCTTCCTTGGACGTCCACTTAAGGCGGGGTTCGGCTGGCTTGGCA
TTCGCCGCCCGCTTTCTCTTCCTTCCGTTCTTTTGTGACACTGGTTCCGGTTCCACCTCC
ACCGCCTCTTCCTCCCCTCCTCCTCCTCGGCGTCGTCGAGCTCGTCGTCAATGTCACCGG
CGGTGTCCATTGTTTCATCTTGCACACCGAACTCTAGGTGCAACGCGGCGGCAACGGAGC
CGCTTGTGATGATCTCGTCCATGTCGGCATCGACATAGTTAAATTGCAGCGACGAAGTGG
GCGCGAATGGGAGGACACCACGGCGCAGAGACGACACATGTGAGGCTGCTAACCAGTACA
CCGGTGGTGAGTAGATATACTGGGTGTTGAGGCCGACGCTGAATGCGGGTGAGGGAGTAC
GCGGGTAGTGGCTGAAACCGATGGGGGAGGAACATTGCGGCGTGCCATGCGGTAAGGTGG
TGTTGGGATTGAAGCCGCCATGCGCGCTGCCGTCGGAGTTGCCAAGCATGGGCACATACC
CTCAGGGCGGCATCATCGGCGAGAGGGTGGCCGGCGCAACACCCTGGAGACTCCTCCATG
AGGCTTGCGGGTTGCGGCCGGGCGGATTCATTATCCCCGCACGGGACGCCTCTTCCTGAT
CGACCGTGGCGGCCGCCGTCGCCGCCTCCGCCGTGTCCCTGATATTTTTGGCATCGAGCC
TCCTCCACCGGTCTGTTGTGACCGCCTCCCGGTGCTGGACATCTGCCCTCCACTCGGCAT
CCGAAACGCCCGCCGGCCTAGCCATTGGCTTCCTCGACTTCGTCTGCTTCGCCTAGCTGG
AATCGGCAGCGTTGGCAGGGCGAGGGGAGGTGTAATTCTTCTTCGACGACATGATGACTG
CATGGCAGGAGCGGGAGAAGAATTGCGAGAGGGGGTGGGGAAATGGAGGGAAAGGGAGGG
GGGAGGGGGAAAAACGGGAATGGCTCGGTTGCCGCCGACAGAGCGGGCCCGCTTGGCTTT
TTGCTTTGACCGGTGCTCCCAGGTGCCCCCAGGGAGCTGGGTTCGACTCGGGTTAGCCGA
CTGTTATTTTTGCACAAACCAGCACTATACGAGGAGTTGGGGTGCGGCTGGGCCGATTTT
GCATCGACAGCGTTAAGAAAGACGCACGGGTGGCATGTTGGGGGGCGAGTGGAGATGCTC
TAAGTACTTAGCTCATTTCCGTCCTCCTGATATGACATTTCTGTGGCACCTGGCTTATCT
TACCAACGGAACCTAGTCGATGGAATTCAAGAAAAAGATTTTGAAATTACATTAAGTAGG
CAAAATTGGGTTATTTTTTGTAAATTTTCATGCCTGGTTGATCTTCGGTTATAGGAAGAA
AAACTGCCGGTGGAACTTAGATTTGATTACAAAATTTCAGATTTGCTGTAACTATATGAA
GTTAAGTGAATTCCGAGTTTAATGTAGTTGGTCGTTCGACAGTTACCGTCATGCGAAATT
TGAATTAATATTGAATACTACTCCCTTTGTAAATTAATATAAGAGCGTTTATATCACTAC
TTCAGTGATCTAGATGTTTTTATTTTAATTTGTGGATGGACCAATATTTATTCATCTTGA
ATAGACGTCATAAAGTGAATTCCATGTTGATATGATACTTTAGACACATGGCCCCTCACG
TTTGAAATTCGACAATGAAAACTAAGTATGTGTTCAAGATTTTGAATTAATGTTAACTTT
TTTTTAAAGAAGGATGTACCATATCTACCTTTGCATCCATTGGTGCGTGCAGCCATCTTT
ATTCTAAAGGAATTTTTAAGGCTCATTTGGATGGCCCCATAGCTAGCCACGCTAATCGAA
GCAAGCCAAATAATTGGCGACCGAATTTGCCACTGATTCACCCTCGAGTTCGCGTATGAA
CTACAACCAATATTTTTTGGCGTTGGTTAGAAAATTTGATATCCAACAAAATATACACTA
CTACAGGATGCTGCTAACGCGACACTACAATCAGAGGCCACATGACGAAATTGTGTGCAA
TGCATGAATTACAAACGGTGATGTAAAAAACGTCAAAAAAGTGCAAAACGTTTGCGATGG
TTGAGACACCAAACACGATTTAGATAAGAGTTGTGTGTGCGACGCGTGGCATACGGTTCA
CTCCAATGAACTGTTTGCAATGAGGCAGAACAACACAAACAGGCAGCCAGATGAAGGCGT
GTGCGATATACAACATATAGTTCACTCGTATGAACTGTTTGTGATTAGGCAACAAAACAG
AAATGGTCGGCCAGATCAAAGGTGTGTGCGATATACAACATACAGTTCACTCGGATAAAC
TGTTTGTGTTGAGCCAAAATGTAAGTGCATCTAGTGCCCTTTAGTGACTTAGATGTATTG
AAGACTTATAGGTTCAGGGACTGATGTGTTTGTGAGTGTATACAAGCTCTATAAGTCGCC
GAGGAGTTTGATTTATTCAAATAATATCGACCCCTAAATTGAATGTCTTCAACTGAAGAC
TTTGATAATTCCTCGAAGACTTTGAAAACAAGGAAATTGGTGTGCCCTTGAAGATATTGA
TGTGAAGACTTTGAAGCGTGAAGACTTTTATTTCCTTTCTTTTGAGTCATAGGAACACTG
TGCTGTTAAAGGGAGTCGAGGTAAAACTAAGAAAAAGTTACCAAGTGATGCTCGTCTCAG
AGCCTACACATATCCAATTCTTCGAGTGAAGCCTTTGGAAATCTTTTATAGTTTAGTCAA
TTTCTTCAATGACAAAGATAAAGCTCTTCTGATCTCTGAGAAAATTGCTCTAACAGAGCA
ACAAAATGCTCTTGAAAATCTTCAGAAACTACTAGACGAAAGTGATGGCCCATTGAACAA
GGAAATATATCGGACTCAAACTCTCACTGATGATGTTCAAAGTCTTCAATCTAAGTTTGA
TAGTCTTCGAGAACTTCATGACACTCTCTTGGCTGATCATGAGAAACCTTCTTATGAATT
TCTTCAAAGAAAGAAAGATCTTGAGAAACTAAGAGCGTCTAATGATGATCTTCAAAGAAA
AAATGATTCTTTGCTCGCCCAACAGATGAGTTCTGCTCAGGAAGAATTCATTCCANCATG
CATGAAATGCATCGAACGTGAATCTGCTAATTCTTCACCTCAAAGTTCAAATGCTTCTAT
TGCTACAAAATTTTCAAATGTATATGTGGTCACAAATTCCTCACTTGGAGAACCCACAAA
TGTTACTAACGAAAATGCAGGGTTTAAGGAATTGTATGTGACACGCATATACAAAAGTCT
CAAAGGGTATAAAACCCTTTGTGATGTGCTCAAAAAGCAGATTCTGAACAGAAACCCAGG
GAAAGAGGGCATTGCATTTGAGAGGAAATTAAATGCTGATGGATCATACTGGAAANNNNN
NNNNNNNNNNAAAACCTCATGGGTTGGTGCAAAAGGACCTCCTCTTGATCCATCTACATT
ATCAGGTTTTGCATGCGAAACTTCATATTCCTCTCATGGGTCATTTGAATCCAACTATAA
CTGGTTAAAAACCAGAATGGTGAAGTATTTGCTCAATATGTTGGAACTAACTATAGGAAT
GGAACACTGATGTGTGCTAGCACTATGTCGGTATTTCCCCAAAGAGGAAGGGATGATGTA
GTATAGCGATGGTAGGTATTTCCCTTAGTGTTGAGACCAAGGTTATCGAAGCAGTAGGAG
AACCTCCTCAGGCCACATAAACAGCACCTGCATACAAATAACAAATACTCGCAAGCCGAC
GTGTTAAAGGGGTTGTCAATCCCTTTCGGGTACAGCGCCTCAAGATAGGAAAATAATGTG
AGGTAAAAGTGGTAGATA
