Contig Data
morexGenes
Links



Map Locations of contig_60066 (5206 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_60066

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71561 1 1030 bp AK251031.1 Available Available None





CDS Structure of MLOC_71561






Contig Sequence (5206 bp)

>contig_60066 5206 assembly3_WGSMorex_rbca.fasta
GGCCGGGACGAAAAGGTTAGGCCTTTAGNNNNNNNNCTTTAGTCCCGGTTGGTGAACCGG
GCTAAAGCCCCTTACGGGCCGGGGNNNNAGGCCCTGTCCCCACTAGTGCATGTAACCTCC
CCCACACAATCACAGTGATCTACCATTTCCTATTCTCAAAGAAAAAAATCTACCGTTCTC
TCAAGGCTCGTACCTCTCCTTTCCAAAACTGAGAAGCATGTGTATCATGACAATCGAGAA
TTTGGATTTCTAGTATTATACTTAGAGTCAATAACCTTTCTCTACATTATACCTTTGAAC
ACAATGTGTCTCCTAACCAAAGTTCCTAAGAAAATTTCAGGTCCTACAAGTTTTGAATGC
CTAAGCCCCCCAAATCTTTTTTCATATAGATGGAAGGCCAATTCGTTTATATGAATTTTA
TTATTCCCCTCATGATCAATTCAGAGGCAATTAGCCATCAAGGAATTGATAATTCTTACA
GTGGATTTAGGGAACTTCAAGAAACGAAACATATAGACTAGCTAATATACTCAAAAGACA
TGACTCAAGAAAACTATCTTGGCTTTATGAGATAACATATTATCCATAAAAGCCTGAAAC
TCTAGGTAACATATTATCCACTAGATGTTGCAAATTCTCCATTCTAAGGTTCTCAATGTG
AAAAGGCAAAGGTAAATATTTAAAAGGAATCGTCCATCTAACACGTTGAAAAATGTCAAC
GACCGGGGCCACCACATCATCATCCATGTTAATCGAAATGAACTCACTTTGATGGTAATC
AATTTCATCCGTGAAACATGCTCCAAGCATGTCAAAATCCATTTAAGGTTTAAAGCTAGC
ATACCACCATCCTAGGAGAAAAGAAAAGTATCATGAGCACATTGCAAGCAAATTACCCTC
CATGACCAAAGTTCTGGGTAGAGCCTTATAATTAGCCCTTCTTTACTCCATTTGACTAGC
ATCATGGAGAAGACATATGCAACTAGGTTAAAAAGGATAGGGGACAAGAGGTCTCCTTGC
CTAAGAGCATTACAGTCGGGTGCCCCAAACCCGCATGAAACATCTGTGCGGACGGCCCGG
TCACCGACTGGTCACGAAAATGCGACTCACACGGGTGCCTCAAACGGGCCTCAAACGCCC
GGGTTACCGGCACCCCTCATATCTAGTCCAAATCTAGGGAGGATATGGGGGCACCCAGGT
GTGTCCGCCCAACAGGTCTACCCCACCACAAATTGTATCAAATGCAGCCCCTCCACCCCC
ATTTTCTCTCTTCTCTTCTTGTTTCTCGCCGATGTCTGTCTCGCTACTCCGCCTCCGCAT
GCGCTCTGCACTCGTTCTAAGCATCTGCGCCGACTGCACAAGCACAAACTCCTCTCTCCT
GTCCTCGCGGTCGTGCAACTTACACTGTCAATAGCCGCTACTACAACATGGGATACTAGC
TTGTCAATGGCATCTATCCTTGGTTAACGGTGTTTCTGAAGACCATTTTCGAACCACACG
GCAGGAAACAAAGCCAATTTGCCATAATGCAGGAAGCAGCTAGGAAGGATGTGGAGAGGG
CATTCAGAGTGCTTCAATCTTGTTGGGGAATTGTTCGTGGAGCTGAAAGTAGGAATCAGA
AACTTTGTGGCAGTTAATGACATGTTGTCTTATTTTGCACAACATAATCATCAAGGATGG
GGTGATGGTGTTGCCCAAACCAATGATTTTGAAGCACGTGGAGAATAAGTTCAAATCTCA
AAAGGCCAAGATGCAAACCAACTTATGAACTTTCTACAGATACATCGGAATCTTTGAGAT
CATCAGGTGCATGCACAACTACTCAATGATCTTGAGGATTATATGTGGGTCCACAATGTA
TATCAAAGAGTTGATGAATGAATTGTGCACTTTAAATAAAATTTATGTAAGAACTATGTA
TTTTCACTACCAAACATTTGTTATTTCATGTGATATTGACGTGTAGGATGAACGTGCATG
GATTTACATTCATTTGAGATTCTCGATTTGAGATATGTGGATGCATAGCAATTGATTTGA
GGGGCCGTCCAGATGCGCCCACGAGCGTATCCGGGCGTGTCGTGGACGTATAGGGGGCTG
ATTTGCCAAGTCTGGTAGATGCTCTAATTAAGTCTCCTCCTTATAGTAAAGAACTCAGTC
TCCTCCCCATTATATTAAGCTTGATACCAATAGAACCTTGTTGGGTGGCACTTAATCCAA
CGTATCCAATTATGTGCATAAGCTTTACATTAAAGCACTTCACACAAAAATTATAGTTTA
ACTCTATTATATGCTTTCTCAGGCTCAATTTTAAAAACCAAGCCTTTTCACCTTGGAAGA
AAAAATGGAATGCATGGTGTTCCTAATAATATTGTGTCCTGATGGAACATGGCAATGGGT
GGGAATACTTTGCACTTGATTGTAGCATGATTCATACATAGTAATTTCTTGCTACACAAA
ATGACACAAATATTACAAACCTGGGTAAAAAAAAAACTGACACCCACTGACCCCTGACCG
TCATAACAGTTATTCCGAATTCATTCTGCAAATACTGGAAAACGTGGTAGGGAATGATAA
AAGGCCAAACCAACCGCGCGTGCGGCGATCATAAATAGCAACGTCACTCAGCATGAAACC
ATGGGGATTTCAGTGCTGGGCTAGCTGGACGGTCGTAGAACGGAATCAGTGGTGACCGTG
GTATCCACCGCCACCGCCGCCGCCGCCGTAGGTGGGCGTGGGAGGGACGGGGTGGTAGTC
CGGGTGGGGCTGCGGCTTGGGTTCCGGCTTGGGCACCGGGCCGTAGTCTGGGTGGGGCTG
GGGCTTGGGCTCCGGCTTCGGTGGCACTGGCTTCTTGTGGTGGAAGTGCTCCATGATGTG
TTTCTTGATGGGCCCGCACAGGGTCATGGACTGGCACTCCGGCGACGCTGCAGACGGCGT
GGCAATGTTGTCGCCGGCGACGATGCCGAAGGTGGTGCCCTCGGAAACCGGCACGATCTT
GGATGGCTCCTGGCCGGAGCACGGCGCGTTGGAGGCGGCACTGTGGAGCTGCGCGACGCA
GTCGGCGCCGCGGAGGTTAGCGTCGAGGGGCACGCTGAAGGCGCCGGTGCCGTCGAGGGC
ACCCACCGCCTTGCTCTCGTACTCGCCGTCGACGTTCTTGCACTTGATCGCGACCTGGAG
ACCTGAAGTACGTTGAGTTGAAGGCAGGAGGACAACCATGAGCCGATCTCCATCTATATA
GGTATATGCATTAACATATATAGTACGATTGAGGTGCATATCTTACCCTTGAAGGCTTCC
TCGGCCTTGATGTTCTTCCTGGTGCAGTCGGCGCACTTGGCCAGGCCGACGACGACGGAC
GCCGGCTCGGCGTTGGCGACGGCGATCGCCAGCAGGACGGCGAGGACGAGCGCTCTCGGA
GCCGCCATGCCTGAACCTCTGAGCCGCGCTGCCACTTGCTTGCCTGTGTGAAGTGGCTGC
TCGATGGATGAATGGATGGAACAGGCGACGCATGGCTTATATAGGCCTCCGCAGGCATTG
ATCGGCACAGCTCGATGGATGATCTGGCTGGCTGCATGCTAGAAGCTCCAAGGGTGGTGG
TGGCGGTGGGCGGCGAAGTGATGCGTGACAACGAGAGGCCGGCTAACTCGCCGAAATTTT
GGATGGCGAATTAACTACGGCGCCCGCGAGCTGCATGATCCAATCGGTCGATCGGTGCGT
GTGCATCCACGTCGCTGTTGGTGATCGACTTGGTTTGGTGGTGGAGTACTTCGGTAGGCA
CCGGCCGCGTCTCTCGGCATGCACATTCATGCAGCGTGCGTGCATGCATGCATGCAGCAT
CAGTTCGTACTCCTCCGTTCCTAGAGGGTTCACTAATGAACTATATACGGATGTATATAG
ACACACTTTAGAGTATAGATTCACTCATTTTGCTTCGCGTGTAGACACCTAGTGCAATAT
CTTAAGAAGATTTATATTTAGGTATGGAGGGAGTACTTCGTAGTAGTACCCTCATGCAAA
AGGAAAAAAAATGGTTCGTAGTAGCAGGCTAGCAGCAGCACGTCAGTTTGCTGGTGGAAA
TTTGGTGTTGCATCGACATCAGAATTGCTGTAAAGTGACACGTCCATTTTCTCTTTTTTG
AAATAGGCTTTCGCCTCGCTATATGGATATAACAACCATCAGATACAACATTCCGAACAC
CGCTAGAGCGGACAGCACATGACACGTCCATTTTGGGGAGTAGTGAGCTTGCGGTACAGT
ACCAGCTCTGAGCAGTGATTTGTTGTTCACAAATAGAATGTTGTAAAAATATGAACAGAT
TCCAATTATGCTTAATCCAAGAAAAAACAGATAGCAGATGATCAACAACATAGCTCAGCT
TGGTAGATTTCCTGGTCGTACGTACGGCAGTGTGGATTGGTAACTTCCCTTAGGAAATTG
CGGACTCCATCACCGTGATTGTACTTTTAGCATGAGCTAATTTAAATCTCTCTTTCCCAG
CAAAAAAAAAGGAACATAGTTGACATGATATCCGAACAAGAGAAGTTGGTAAGCAGAACA
GACATGCTATATGCTCGATGGGTATGGCAAACATCTTCCACCATGGATTTTTTAATTAAC
CATGCACAGATCTTCATGAACAGTGTCCAAAGATAAATGTTACCGAGCATGGGTTCAGCT
GAATCATGGTCCAGAGAAACATTTTCGGATCGAAGGCTAGTAGTAAGGAACCAGAAGTGG
TGCATATATAAAGAAGTGTTCGCAGTCATCACACCGTCGGCGGTTGACATGGCGTGAAGG
GAGGGGGGTCGTCGTCGGTGTAGTCATAATTGAGGAAGTCATTCTATGCCACAATACTGG
AGGAGATGCTAGCAGTCACGCTAAAGCTCTCCCCAAAAATCCCGATCTCCTCTCACTCAA
AATAGACAGGGATCTGGAGGCCTGATGTTCCACATCGCAGTGCATGATGGAAAGTGGATT
TGGGATTACAGCAAGATGAATAGTGGATTCAATGTCGAGTATGTGGATGATGTTGCTGAT
GATGATGCATGGTTGATATCGTGGCCTCGGTGGTCCAAGCTTTGGCGAGATGGTGTCCTT
CTGCTGATTCCCACTTCAGATCCCTTCGGCCTCGTTTGGTTAAGGGGGATTGGCGAGGTT
TTGAGAGGGAGGGATTTCAGGAGATTGGGTGAATCCCTTTGTTCCA