Contig Data
morexGenes
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Map Locations of contig_59915 (5454 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_59915

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71477 3 1422 bp MLOC_71477.2 Available Available LOC_Os10g42850.1, FRAME:+2, EVALUE:2e-52, 13110.m04048 protein OsWRKY2 - Superfamily of TFs having WRKY and zinc finger domains, expressed
MLOC_71478 1 1593 bp AK367293 Available Available None





CDS Structure of MLOC_71477






CDS Structure of MLOC_71478






Contig Sequence (5454 bp)

>contig_59915 5454 assembly3_WGSMorex_rbca.fasta
AATTAAGTAGCCTCGGAGAACTACATGTAGCTCCGCCAATATCATTGATTATATCGTGAT
AATTAATCCAAGTCGTCACTAGCTTGACATTTTGTATTCATTTCAGTTGGAGGGCATGCA
TTTGGGAATTTTTAAGGGAGCTTAGTTCATCTGCTCAAGTTCGTAAGGCCTAATACATAC
TGTGAGATTACTTTAACAGACAATGATAATAATATATGTGGTGTGTGTCATAAAAGTTAT
ATCACCGGAAACTTCTTTCAAATACAAATTTGATGGTATACTTTTTGTGACATACATAAC
ATATATTATTGGTATAACTCTGACGATCAAAATAAATCTTGAAGTACTATATATTAGCCC
TTAGTACAATAACTATCTCAAGCTTAGTACAATTTTGTACTAGAGCTAGTACAAAGTTGT
GACACTTATTTTAAGACGGATGGAGTATATATTAGCCATTATAACCCTGTCGGAGAGAAT
ACGGCACATGCCATGTGAGGGCTCGCACAATGCAGTAAATTCAGAAAGTTGTTGCCCGGG
AATTTTGTTTTGTTTTGGAAAAAGAGGTTAAAATCCTCGGCCTCCGCACTAAACGATGCA
TATAACCATTTTTATTAATTATTCATCTCATTTATGCCTCTTCCTTGCCGGTCAAATTAA
CAAGCTGCTAGTGCTCGCCGAAACCCATGAAATGATTAAAGATGTGTCCGGAATCGGCGG
GATACAAAAAGGCAAAGAAAAGATAAAAGCCAGAAGAGATATTGAATTCGAGGGCCTTGA
GACCCTTTTTGATCGAAAAGAAAAGGAGATAGATGGATCGACCACTGAAATGGTAGCAGC
CATCGATGGATGATCGCCCATGGGGGGGTTGCTGATTTGGACCGTGCAAGACAAGACCAT
CAATGGCTCCATCAGTGAGCAGAAATATGCAGTACTCCGTTCGATTAAATGTTGTGATCA
ATAGATTATATATATATAGTTACATGCATGCTCCCTTTGAGAATGAATTACCTTGAATAT
TATTTACTATATGTATAAGTTGTCTCCTCTTTCACTTGTATAATGGCAGCACCACCTTCG
TCTTGCTTTGCTGCCACTTTTCCTTCCCTAGCTAGTGTTAAAAGTCAGCCCCGGGTTTCC
AGTTTCCACTCATTTGTACCACTATATGTGTAGCTAGCCGCCTATCCTCATGCACATACA
TACAACAAGAGAAGCGCTCGCTAGATCGGCTGAGTCCTCCCTCTGAGAGTAGATATAGAT
GATCTGCATGCATGGTAGGTCACGGCGCTGCGCTTTGCGGGCTGATCGATCATAACCTTC
ACCAGTGAATCAACACCGATCGACATCGGCGGCCGTCGATCATGTGCGACCTGTTTTGGC
TGTCGCCGGGCGAGCAAGGAGACCTCTCCGATGTCGTCAGGGCAAGCCTGCACCGGCCTC
ATCAGCTGCCAACCCCGGCTGCCGACGAGGAGGAGGAGGAGTACAGCTCGCTGCTACGGG
AAGGAGGTAGCGGTGGAGACGGCCTGGTCGTCGGCCATGGGCATGGCGATGAGCAGCTGG
GAATGGTGGCCATGATGATGGGCGGCAATACCAGGCTTCCCTCGTCTGATCATCACGTGA
TCTCGCTGCATTCACCGCCGGCGACGACATATACACGGCCGCATCCAGAGCCACTGGCCG
GGATGATTCGTCGGCCGGGCATCGGCAGGGAAGGCGAGATGGTGGTCGCGCCGCCGCCGG
AGATAGGCGAGCGCCTGCAGCACATGTCGATCGTCCATCACCCTCGTGTGCCTGCTGCGA
TGAAGCCAAGGTTAACATATTCTCACCCGTCTGATATAGCTTCCACACGTACGGACCGAC
GGGCACCACTACGTGTTAAAACATGCCATAATCGATGCTGCGTGCGTGCGTGCAGGAAGA
GCCAGTCGAAGAAGGTGGTGTGCATCCCGGCGCCGACGGCGGCGCCGGGGGCGAGCGGCC
GGCATAGCACGAGCGGCGAGGTGGTGCCGTCGGACCTGTGGGCGTGGAGGAAGTACGGGC
AGAAGCCCATCAAGGGGTCGCCGTACCCGAGGGGCTACTACCGGTGCAGCAGCTCCAAGG
GGTGCCCGGCGAGGAAGCAGGTGGAGCGCAGCCGCACCGACCCCAACATGCTCGTCATCA
CCTACACCTCCGACCACAACCACCCGTGGCCGACCCAGCGCAACGCCCTCGCCGGATCAA
CCCGTCCGTCCTCCTCCTCCGCCGCGAGGATCGCCGCCTCCTCTTCTTCTTCTTCGTTGG
CGGCCACAGCAGCTCGTAATAGTAGCAACACCAACGTCGACGTCGACTGTGCCGGTGTTC
ATCATCAGCTAAAGCAAGAGAGCGACCTGGACCTGTTCGCGGACATGGATGCCCTCAACG
TCTTCTCCTCCATCAACAAGATCCAGGAAGATGACAGCAAGCAGCAGCTGTTTGATCCGT
TCAGCTCCGGCTTCTGCGACTACATCTAATCCAGAATTCATCATCTGCCTCTACCGCTGA
AGGCTACGAATCAAGCCAGCAATCGATGCTTACACTGTACTGATGATGATACCTTTTACT
AGTCTCAGTAGTAGCTTCTATTGTGCCTTTTTAATGTTTATTTACTGGATGGAAGGAAGA
GCATGTCACTATAGATAGGGAAAGAACATGCAAGGCCAGATTCGTGTGTACTTGTCCATG
ACAACTTGGTTAATTATACTGAACCCAGCTTAAGGTATATAGCCTACCCATGCAAGCAGT
TTTTACTCACATCTTGAAGCTATCTAGGAGGGAGTGGTTTACTAACACGGCAACTGTTTC
TGAATCTCTTCGATCTATCACTTCAAGTTCCACCAATCTCCTTTTTCATCATGATGATTT
GATGGCGAAATCCGGCCACGCCGCACTGTTAAAAAAGGTTACAAAGAACGATAAAAAGGA
AAGGAGGAACATGCTGAAAGGAAAACCTGAGGCCCGAATGCGCAGATAAAAGCTCACACG
ACAACAAGAATCTCATTACCACAATGCAAGCCCTGTTGCCCATAGTCTCTGATGAGACTG
GACAATGCAAGCCACTATATTCTAGTTTCATGCATGATTTTCTAGACCAATTGCAGCCCA
AAAAGAGAACTTTCTATATGGCCAATAAACGATGCTCTTTATCCTTGGGTACACATTCAT
ACTCAGATTCAATCATTCAATTTGCTCCCAGAGCGTATCATGGCACAGAGCAGCCCAGTT
ACCAGCAAATGCAACATTCAGTTTACCTTGAAAGATGGTTTCACCAGTAAGATCTCTGAA
CCACAAGCCGCAATACAATCAAAGTGGTGAACTATGCCATTTGAGAAAACAAAAGCACAG
AACAATGTCCTCTGAATTTCTACAATTGAACACCAGGTCAAAACATTGGCATGTGAAGCT
CACTGAATCTGAAGCTAGGATAAGGAACATTGAGTTTCTTTACTGGCAGCAGGTTGGCCA
TCATCACTATGGCGAGTCTTCTCCGTGTGCATAACAAAACACAAGGGAGCCTTTATCAAC
TAGAAGACTAGATTGTGTAGAAAACAAGCAGATGGTAATACGATAAAATGCTCATCAGTA
TTGGTGAACAGATAAGAGCACAAAAATCTGATGATAATGCATCTAAGGACAAATCTAAGA
AGATTACAATTGGCAATCAGTATTTCATCGATCAGATTCATGCGCCAATCCCCATCCTGC
ATTCATCCATTTCCTAGCCACAGAAGTTGAGCTTCTTTATAACTTTTGCATAAGCTAAAT
GCACTAAAGCAGGCTTCCGAAGTCTTCGCTTTGCTTCCTTGGACTGCAAATTCATAATTA
CATCACAAACAAATTCAATGAAGAAATCTAATTGGAATCATATGTACAACAACAGAACCT
ACATGTATCGAGTTAAGTCCGTTTAACACCATAAACTATAAGCTTCATGTTGTTTCTCCA
CTAATCTATTTTTTGGCACAACTAACACCCCCACCCCCTAATTAAACGAGCTAATTATAC
CTCTAACCATGATTTACAGGCCAGATTAGCTGATTAGGCACCGGCTTAGCTCTTGATCCT
CAAAAACCATAAATCGATCGATATAGATGCCGTCGCCGCCACTCCTGCGGCCCTACATCC
CTACTAGGGAGGTGATCCCGTGATTCACCGGCCACAGCCTCATCCATGACCCTATCAGTT
GCCACGGGGGAGACTCTCCAAGACCTCTTCATTGACCTCTACAAGGGGGCGCTCTGGTGG
CTGCGCGTCGAGGACCACGATGGACAGCTTCAAAATAGACTAGCTCATCTACTGCGACAG
CCCATGTTGGCACAGCCCCAATAGCACCAAGTACTTCCAGCGAGAACAAGAAATCAGAGG
TGACGAGATGTGTACATACACATCTAGCACACAGTGGCTGATTGATTTGTTCACGACATG
TACTGGTCCCCAATGGCCAAAGCTAGCTAGCAAGACGATCAAACCGATCGATTCTAGCAG
CCAGACGAAAACACACAATATGCACCACACTCGAGGACACAGGTGATTGCAACCTGGCGT
CCGCCACAGGGATGCATTGCACACCGTCGCATGGAAGTCTAGCCGGTGCCTCCTCAAGTT
AATGCGGAGTACTTCGGGCTACGCAGAAAGGTGGCTCTGGTCGGCATCGGTCAAGTCGGA
TGCAAACCAAAGGAACTGGTCACAAAGTGCGTCAACAACTTCGTTGACTGGATCAAACAG
TGTCGAATCTGCAAAACTGGTGCCTAATCAACTAAATCGGCTGATAAATCATGGTTAAAG
AGTAATTAGGTCAGGGGGCTAGATGTACCAAAAAATAGGGCTCCTTTGATTGAAAGGAAT
TTCATAGGACTTTTGAAGGATTTGAACCCTTAGGGCCCCTTTGATTTATAGGATTCCTAA
AGGAATTTTGATGGATTCTAATCCTTAGGTTCACAGGAATTTTTTCATAGGATTCGTTTG
TACTAGTTTTCATACGAAAATTTCCAACCACTCCAACCTCACGTGAAGAATCCTACGTTT
TTACTGTGTGCAATCAAACATCCACACTAACCTTGTAGGAATGAATATGGCACGCCACTC
TATTCCTGTGATTTTCCTATTCCTATGTTTTAGAAACCCGGTGAATCAAAGAGGCATTTA
TGAATTTTTCCTACATTCATCGTTTGGTTTATAGGGATTTTTCCTAAGGAATCATTTGTA
CTACATTCCACAAAATCTAGCATCCAATCCAACCACCTTTTAGATTTCCTTTGTTTTTCC
TGTGACATCAAACACTATCTGGCCTATATGATTCAAGTGGCCATGGCACATCCTGTGTTT
TTCGTGTTCCTGCATTTTGATTCCTCTCAGTCAAAGAGGCTCTTGGGCAGGGGGGGGGGG
GGGGGTCAAAAGGGGATATTTTGGGGGGGGGAAAGGTTTTTTTTAATTTTTTTT