Contig Data
morexGenes
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Map Locations of contig_59822 (2418 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_59822

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71436 2 1029 bp MLOC_71436.1 Available Available LOC_Os11g24070.1, FRAME:-2, EVALUE:5e-28, 13111.m02293 protein LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MLOC_71435 1 338 bp MLOC_71435.1 Available Available None





CDS Structure of MLOC_71436






CDS Structure of MLOC_71435






Contig Sequence (2418 bp)

>contig_59822 2418 assembly3_WGSMorex_rbca.fasta
TTTGAGGCCTCGAGGAGAAAGAACTGTCGCCAAGGCTCCTAAATAATATTGTGGGCGCCC
CCACATTTTCATAGTTTGTAAGGTGTGGGCGCCCACCGAAAGTCAAATTCTTCGGTTGGC
TTGCCCTCCAAGATCGGATTTGGACCGCTGACCGGCTTGCATGGCGTGGGTGAGCAAATT
GTGGCCTATGCCCCCATCTGCAATCGGAAGCAGGAGACGTGCATCCACCTCTTCGTCAAA
TGCCGCTTCACTACTAGGCTTTGGCGTTTGATCATTGTTTAATATGGCCTGGTACATATG
GACACAAATGACTGGCACCTTGTGGAGTCTCTGTTGGAGTGGTGGGATAGGCGAACCAAT
TCGACCAACCCTGATCGACGTGCCATGGCTTCTCTACGGTGTTCCGCCATAAAAATGAAC
GCTAGGGTGTTCCGCCATAAAAATTAACCGCCGCCAAGCCTCCTAAAGTATATTATGGAA
AGGCTGGTGGCCTTTGGGTTACGACGGGTGCAAAGAAACTGGGGAAAATTGCATTACACG
AGTAATTGTCATGCCGTTTTCACGGTGTTCTTGTAACACTATGTAACTTTATTCTCCTCT
CATTTAATCGAAGAGACAAATCTTTTGCCCCCGTTTTGAAAAAACAAGAGGATCAATGGC
ATGGGTTCGTTTTTAGAAATATACGACTATTAAGCGTGTTCATAGAATTAAGCCAGTAGG
AGTTTTTGTTATGTGTGTTGTCAAACAGTGTTTAGTTGAGGAACCAAAATGAGTGAAATG
TCATAGTTCAGATCCTAGTAAATTGGGTTTATTTTCATATGTTTTGTTGGAGCAATAAAC
AGGAACGGAATAGTTGAATAACGACGCACGCAGGCATAGCTGAGTGTATGATTCATATAT
CAACAGTGCACATGGTACAAAATACAATAAACTCTTGGGTCCCCTCAAAGGGAGTGAAGG
AACAACCAAACATGGATAGAACAGTATGGCCGGCCATGCAGAACTGGCTCAACATAGATA
CTCCGTCCTCTCTCTCTCTGTCTCTCTCTATATATATCCCACATGAAGATAATATGAGAG
CATTTATTCATATATATGTATGTATGTGTGACCTCAACGTACTCAGCGTCGATTGCTGGG
GCTATAGGCAGCAAGTGGTTGATCAGCGAATCTTAGAGCAGTCGACGGAAGCGCTGATGG
CGTAGGGGACGCTGACGCCGCACATGGAGGGGATGCCGGCGGCCTTGCCAGCGTTTAGCC
CACCAGCAGCGCTCTTGATGCACTTGCACGCCGCTTGTTTGTCAGCGGTGCTCTGGGCAG
CGCCGGCCAGTCTCTTGACGCCGCTGCAGCAGGCCGCAGGCGGTTTGGCGCCGTTGCCGC
GGGCATAGGAGATGCAGGGGCTCAAGGCAGAGCTCACCTGACCGCAGGAGATGGCCGCGT
CGGCGGCTACGAGGAGCATGGCGGCCACCAGGGCGACCAGCACGAGCTGACTAGCTGCAG
CGCGAGCCATCCCTAATGAGTTTGGAATAGTAGCGCAGCCGAGCTCAGCTGGAGATGATG
AGATGGCTAGATTTGCTAAGTGATTACCGGTGAGGAGTTTCGCAGGGCCTGCGTGGGCTT
AAATAGGGCTGCTAGCCAACATGTGATACAATTTGCTATAGTATATTGCGTCCACTGGGA
TAAATCCTATTGGTGTGAGCAAAATGCATAAATTTTGGTTGCTGGGTGTTGGAATTGGTA
GATGGGTATTAATGCATTTAGGAGATGGTTGGTTGTTGGGTTGGGCCGATGGATCGACCA
AGCATGCTAGCGGTGGCGGGGCTGATTAGAAAAGAGACTCCTTCAGCCGCCTCCTCCTCC
TTAAAAAAAAGCAAGGTTTCTGTCTCCTGCCAGCACCGTCGCAGGTCCGCCTCCACTCCG
ATGGCCCTAGGACACGGTTGATCTCGGCAAGGGCTGGCGGGAGGGCTCCGTTTTTAGTCG
TTATTTTTAATTTTGTTAGGGTTTGTGTCCTGTTTAGGAAGACGAGACGACGATGGTTTC
CTGAAGATGGAATAGAGGTTTCCATGTCTAGCCCCCGTTCCGGCGGTGCATCTAGCATCG
TTGGTGGGCGTGTAGAGGTGTGTCTCCGGCGAATCTATCTTTGATGAATTTTCTCAGATG
TCGTCGTTGTTCGTCTATGTTCGTGTGTCCTCAGATTCGATCCTTCTGAGTGTGTTATTT
CTCATCTTTGACGGTTGCTGTTCTGGTGCGCCGGTCCTACGGGGTCATAGCACGACAACT
TCACTACTGTCTACTATATCATGTTGTGCCCGACTCCGGCGATGGAGGGGCGATGACGAC
AACGCGCCTTTGACTCGCTTCAGTGCTTGTGATCGTCGCTAGATGATCTACAGATCTAGA
TGTAACTTTTATTATTTT