| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_59782
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_71416 |
1 |
865 bp |
MLOC_71416.1 |
Available |
Available |
LOC_Os01g04050.1, FRAME:+1, EVALUE:3e-11, 13101.m00359 protein BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed |
CDS Structure of MLOC_71416
Contig Sequence (4003 bp)
>contig_59782 4003 assembly3_WGSMorex_rbca.fasta
GGGGGCCCAGCGGACAGACCCTTTAGAACCGGTTTATATTCAATCCGGGTCCAATGTGGT
TGGCTCAATGCCCTGTTTTCTACTAGTGTGTAGAATAACATGTGAATACTATTTGAATGG
GTAATGTTAAATGCTATATGAACTGAGCGCCATAATAATCTAGCTATTAGACACTTGATG
GACATGCATTTAATCGTTTCATCTTGATCACAAAAACAACATCGTTGACTACCCTTCCAA
CTTCGATTTGCCAAGTTATCCTTTGTCAAAATCACCTCTTCGTAAACAAATCACATGAAG
ACTTTGATTTTTAAGGATACTATTATTTTTCAAATATGTATTAATTTCGGAATTGGATTA
GAGTTAATTAGGTCTACATACATAGACTTCACTGAAAACACATCGTTCATCGTCAGTCTC
CAGTGAATAGTATCCGGCTCATTAGAGAGTTGAACGTCCATGAAGTGTGTATTATATTTT
CAGATTTTTTTTAATTGTAGAAGGTTGATTTTTTATATATATTTTTAAAATTTCTTACTC
CATAGATCCCAAGAGCCTAATTTCCACTTCCCCCAGCCGGCCGTTTGTTTTTACATTCTT
TCAAGTGCCATCTGATGATGTTGGAGTGCCCAACCACCTTAGTCCAAAACCTCATTGTGC
TTTGGAAAAAAAAAGATCAGATATAATATGAAACCTATGTAAAAGGAGTACGTAGGACAG
TTATTCGCTGCCCCAACAGTAGAATGGTAAATTTGCAATCCATCTTAGCCCGTGTGACGT
GAAAACATGCGATAATTAAGTTTGATCTAAAACATTATCCTTCCGAATGACAATATAAGT
CGGGCAGGGATTGTTAAGCTTTTAATTTAATTAGCAAACTATGTATTATGTGCCATAAAA
ATGGTATGTCCTTATATTCTGATCCAATGAAGTTTCTGAATGCATATTTTTAGGGAAAAC
TCCTATTTCCCACTGACAGATCCGAGCGATCTGTCTGCCACCTCCTCGTCCGTTGATCTT
GCTCCATCTGACGGATCAGATCATGCCCACGCGTCAACGGAGCAGCGACCTTGCGCGACC
GTTCCTTGAAACCGGAGCGTTGTTTCACGAAATGGTCCTGAAGCTGGGTACGCTCGCGCT
CGATGGAAAGAGGCGGCAGCTACCAGATCTGGAAGGGCGACGACGCGACCGCTCGCCCCC
GGCACCGGCCGGCCCACCGCCCCCGACGCTGGCCACTCCAGCCGCAACCCTCGGCCCTCG
ATGTCGGCCGGCCCTCCCCTCCCTCCACACCTCCACGCTGCCAGCCGATCGCCCCTGACG
CCGGTCGGCCCTCCGCACGCGGCAAGCCGCACCACGAACGGTTGCAAAAATTTATGCAAC
CTGACCTTTGTTGCAAAAGTTTTCTGCAACATTACCTTTGTTGCGAAATTTTCTTCCGCA
ACAGTATTTATGTTGCAAAAAGAGGAAAGAATTTTTTTTCTGCAACGAAGCGATGGTTTC
TGGATCTCGATCGTTGTTTTAGGAATTAATAGGTCCAAAGTAGCGATTCTTTCGGCAACT
CGACCGTTGTTTCAGGAATTAACGGGTCCGGCCGGAGCCCCGCTCGCGGATCGGACAGAT
GCACGTGTAGATCGGACGGTCGTTCAGGTGGCGGATGTCTACTAAACATCCGTCGGTGAA
CGCGTAGCATCCCCCATATTATATATATTTTGTTAGACAAATTGAAGAACTAAAAATACA
TGCCCCACTTGTATTCGTGCTTAATATGCCATTGATGGATGTCATATAGATCGGAGAGAA
TAGATGTACAGTATTGCGCAAGAGAACTGATTTTCATGTTTTTGATGAGTAGACACGCAC
AACCATCAGAGGTGTTTATTCAACAAGCAACACCAGCTTTTTGTCGAGAGAGAAAACACA
GTGACGATAAACAGCGTACATATTGTTGGCCGTATAACGCGGCCCACACACAAGCATAGC
AACACGATGACTGCTCATCTCATCTGAGCTTTATTCTAGGCGGCACACCTCGTCCGAGCC
TGAAGCCCTGAAGCGATCAGTGCTTTTTGCATGGGCCACCGCAGGTGCCGTCGACGGTGC
TCTTCATGTCGGCGCAGCGGAACGTCTTGTGAGGGCTCGGGGTCACCACGCGGCAGGCGG
AGCAGCCTTTGGGGCACTTGGGGTGGGCGTCGTCGCAGACGTCGACCCCCGAGAAGGACC
TGCAGTTGTTGCAGCACTTGGGGAAGAAGTCGGCTGCAAGAACCGGTCGGCATCAGATAA
ATATGACTCCGCTCATAAGACGAGACGAGAAACCTCCCTTCCCTCGGTTCTAACTCTGAG
CATCACGAAAAGGCGGTCGATCGAGCTTCGTTCAGGAAGAGGTAGAATGGTTGAGCGTCA
GCGGCTTACCGTTCACGTGGGAGAGGATCCCCATGACCAGGACGGCCTGGAGGATGAGGA
TCGCCGCCAGCTTGGTGCCCTTCATGGCTGCGGATGAACTCTCTTAGCGCAAAGCTCGAG
CTTTACCTGTGCGGTCTAGTGGTAGAATGCTTTGTGATGGTGTGGTGTTGTGGCTGGCTA
ACGCTGCGAGCTGCTCTATATATAGGCGTACATTTGGTAGTAAGCTGATTGGCAACAAGC
AGCCCCGGCTGCGATGCTGCGATCGATCGGTGCGTCCACTATTTGGTTGGGTGGGGGGAT
AAAGATGCTTTGTAAATTCGGGCTTCAAATGCGTTCGCCCATAGTCGGGTCCAGCACACC
AGATCACGTGCACACCGACTGAAACCACGACAGCAGATACCATCTTCCATACACCATTCT
CAGTTATTTCGAAGTCGGTGCCGCAGGATTCACTCTGCCGGACCATAGATAAGGTAGACC
CGACTTGTTGACCCCTGTTGTTACTCCTTCGCCTAGCGGACGCCTATTTTTACCCGACTG
TTGCTCCTCCGAGTAAAAAAGTTCTTCGCGTGAAGACCCCTATCAACGCCGGCGACCTCG
TCGTAAACAATGCCTCCTCTCGCAGTGTTTGGTGCTGGTGGTGGGTTCCTGGACATGAGG
AACAACCATATGTTTCCACGGCGAGCTCCAGCGGCGGTATGCCCCCGGCAGTAACGCGTA
CGAGTACATCCGAGCCACCCAGCAGCTGAGTGCCGGTAGGAGTGTCGTCGACTCCGAGTG
CAAGTACGTGGTCTCCGTCTACATTCGCGGCCTCGGTAGCCGCATCCTCGCCGTCGCATC
GGCGTTCCACGGGCTGCTCACCGGCCGCGTCCTCCTCATCGACCGGAGCAGCGGCATGGG
CGAGCTCTTCTGCGGTGCGAATGGCGGTGACTGAAATTAACGTGTAAGAAGAAGGTGCTC
AAGAACAAGGTGCCCTCGACGGCGACTGAGACCTACGGCAACATGCTCAATAACAAGGTG
CTCCTCCACCAGCGTGAGCACGAATGCGACGGTGGATATCGACCTCGATTAGTGTAGGCA
GAGCCGCAGAGGTGCAACGTCCTACGCGCTCATCAGCGTTGGAGCGTGGTGACCATCATT
GCGGACGCTCATAGGAGGTGTTCGGCGAAATGCATGAACTAAAGGTCAGATTTACTCCTC
TGAATTTAGGAGGTCGGGTAGAAATGCTCAAACTTTAGTGCAGTAAAAGTACTCCACTAA
TGTTTACTTAGAATATTAGTTCTTCTGTAGGGGTACTTAGTCCCTATTTGAAACCACAAT
ATATTATAATAATCTAAATTATAAAGATCGATCATATAATCTCGTTTATAAAAATAATCT
AGGTGGGCATGTCTGGAAGTCAGATTATATAACTGCAATTCATATTTACATTGCACAATG
ACCTGTCTGTCCTTTATCTATACATCTATACCTAATAATAAAACGGCTATTGCTTACGTC
GGAAAACCCACCACGACATTTTTATAAAAAAGCCCCTGTAATTTTTGNNNNNNNNNNNNN
NNNNNNNNNNTTATCTGCAACGCAAAAGGAAAAACCGATTCGC
