Contig Data
morexGenes
Links



Map Locations of contig_59780 (3099 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_59780

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71413 1 1259 bp None Available Available None
MLOC_71414 1 781 bp MLOC_71414.1 Available Available LOC_Os02g13990.3, FRAME:-2, EVALUE:3e-17, 13102.m01559 protein U2 small nuclear ribonucleoprotein A, putative, expressed





CDS Structure of MLOC_71413






CDS Structure of MLOC_71414






Contig Sequence (3099 bp)

>contig_59780 3099 assembly3_WGSMorex_rbca.fasta
TAATAACTTCGAAAAGAAAACATTATCCGAAGTTATACGAATCGGCCGATTAACGGCAGT
TAACTTCTTTCCCCCCCCCCCTCTGTCCGATATGAGAAAAGCATATTCAGCCCACCAACT
GGCCCAGTTAATCGGGTCTGACAAGCCGAGTTATCGGTTGTCAGGCCGATTAACTGGGTA
GTATATTTTGGCCCAAAACTAGTCTCCTATGCCAAGAATGTACAGGTAGTATTGTTGGTG
CTGCTCTCCTTTGATGTTAGATAGTGATGTACAATTACTGCTGCTGTGTTGTTATTGTTG
TTGTTGCTGCTCTTCTATGTAGAGCTAGACATCATCAGAACATCAAGGTAACACTCTTCC
TTATTGCTATGTAGCCTATGATTGCATATTTAGACATTCAGCACAATGCATGTTGCTATG
TAGCCTAGGATATATAGATACGGCCCTAGTTAACCTACCAATAAATGGGTAACCGATATA
TTAAGTTAAATGGCCGATTCGCCGATTAATCCCTTATGAGCCCCCAACCGACATGGTACC
AGTTACTGATATCCTGAACAGTGACATTACTAGACGATGCAGTCCGATACTTAATTCCTC
CCAACGATTCAACCGTAGCTGTTATGGCTGTGTATAAAACCCCCTATTCTGAAGTGTAAC
AGCAAAAGCATTACTCTTTGGTGGACACTACGCAAAAGTGCTCAAACAGTACCAAATCAC
CAAAATCACACCTTGCAACCCCAGCATAACACTGCATAGCACACACTGATAAAGGTAAAC
TCCATGCTTACTACGTGGCCAAGGATTATGAATCCACCATCAGAGAGCTAGCATTGGGGT
ACTAACAGAGATAGTCCCATGACTAACATCTACTCAGTTGAAAAGCATTACAGCATTACC
TCCTCAAGCCTCTGTAGCGACTTCAATTGCAGCCAAGCAAATCGATAACCAGGACACTAA
AGATGTGGTGAGTATATAAACACTAGTAGCAGCAACTTTAAATGCACCAATCCTAATATA
TCTACCTCTGTTGGTACACGGTCCAGTTTAATACTTCATTCCTCTCAACGTTAGCTGGTA
TAGCAGTGCATAAAAACACTATTCTGAACAGTAACAACGAAATCACCACTCTTACTCTTA
GGCAGACACTAGACAAAATATGCTCAAAGAGTACCCACGTTACTGCCTTGCAATCCTAGC
ATAACATAGCATTGCATAGCACGGACCGTTACAGGTAAAGCTCCTTGCCTATAACATGGC
CAAGGATTATGAATGAACCGGCAGGGATGGTACTCGGCCAGCGTCAGATCACCAACGGGA
ACATTCCATCACTAACCTCTGCGAACCTAACAAGGCAGCACAGGATTCCGCCTCCCAGCC
CACTTCAATTGCAGCCAAGCGAATCGAGACAGCTTTGGTCCTGTATCACCAACTATCTAC
AGCTAAGCAGTAACGATTTTCCCTAGAAGCAGATTCCGCCGGCCGGGGAGGTGTTGGGTC
GCACCTTAATAGCAGTGAGAGCTTAGAATGGGAAGGACGGGCAGGTTGCGGAGCTCACCT
CGGTGGCGCCGATGTTCTCGATGATGGCGATCTTGTTGCCTGCCGCCGCCAAGACCAAAC
GACGAACCGGTTAGACAGGGAGGGGGAGAAAAAAAGGCAGAGCCCTAGATCTGTCTGACG
GGCGAGAGGAAGGGGGCAGGAACCTCGGAGGTCGAGCTCGCGCTCCTTGATGGCGTTGAA
GAAGTGCGGGCTCTTCCATATCAGGTCGGCGTTGAGCCTCACCATGGCGCGGCGGCGGGT
CGGCGGAGCGGGTGGCGACGATAGGCGTGGCAGTCGGGGGCGAGGGGGAGAAGAAGAACC
CTAGCCGATGGAGAGGCGGCGAGCGGGCCGCTGGGTAGTCTCCTATCGCGCTGGCCCCAA
CGCAGCAGGGGCGAGTGCCCCTGTTTTCTTTTCCTTTCGGCTTTTTTTTTTTGTGTGTGT
TGGCTTCATTAAGAAATGTTTAGGATTTCAAACAAGAATCGAATTTTAAAAATCTTCACG
AATTTCTTTTCTAAAACGAAAAATTGTTTCCAAATTCAAAAGCTGTTCTTGAATCCGATC
ATGTTCGTGAATGTTCAAAACGTTCAACTGATGTCCGCGAGTCAAAAAATAATTATGAGT
TTGAAAAAGAAGTTTCACGAATTTACAAAAATGTTCATGGATTTTAATAAATGCTCACAG
GTTTCAGAAAATAATTGAAATTTTACAAACCGTTCACCGTTTGAAAAGGTGTCTGCGCAT
ATCAAAACAATTCACGAATTCATTGTGCGGGGCGAGCGCCCCTGCTTCCTTTTCCTTTGG
TTCTTTTTTGAGTCATTAAGAAATGTTTAAAATTTCAAACAAGAATCGAATTTTAAAAAA
TATTCACGAATTTATCTTCTAGAATTCAAAATTATACGCAAGTTCAAAAAGTGTCCATTA
ATTTGATAATGTTTGTGGGCGTTCAAACATTCAACAGATGCCTGCGAGTCAAAAAATGTT
TGCGAATTAAAAAAAATGTTTCATGAATTTCTGGAAATGTTCATGAAATTCAAAAATTGT
GCACGAATTTCATAAGAACGTCGCAAGTTTGCAAACATGGTTGCGAACATCAAAAGAATT
CATGAATTCATTGAATGTTCATAACTTTCAAAAGTGTTTGGAAGTTTGAAAAAAATGTAC
GTTAGTTTGAAAAAGAATGTTTGCAAAGTTAAAATATTTCTCTGGAACTCTAAACATGTT
CACAATTTTCAGAAAATGTCAATGAATTTCGTAACATGCGCAGTTTTTGGAAATTGTTTT
GATTTTTAAAATAAGTATAGGAATTGTAGAAGACGTTTTGCGAATTTGAAAATACAAAAA
AGAATTTTATAAATAGAAAAAAGGAAAAAAAATGAAAACTGAAAGAAAAACACAAGAAAA
ACAAAGTGAAAAAAGAAATATTGAAAATGAAAAAGGAAAGAAAACCACAAGAAAAACAAA
GTGAAAAAATAAATATTGATAATGGAAAAGATAGAAAACACAAGAAAAACTAGCCTCACC
CCCAAAAGACTAGCCTGTTAGGAGGGGACACCCTCACCC