Contig Data
morexGenes
Links



Map Locations of contig_5976 (3539 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_5976

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71400 1 488 bp MLOC_71400.1 Available Available None





CDS Structure of MLOC_71400






Contig Sequence (3539 bp)

>contig_5976 3539 assembly3_WGSMorex_rbca.fasta
GCCGCGGGCGCGTCGGCGGCCGCGGGGGCGGGTTTCGCGGGCGCCTTCGCCTTCTGCGCC
GACGTCATTGCCGACGCCGCGAAGAGCAGCGCGGCCACGAGCAGGATCCGCGACGCCGAC
GCCATTGCCGTGGTGGTGTACCGGCGGGCAACGGGGGTGGTGGGCTGGGATGGGGGCTGA
TCTGAGAGGGAGCGCGATCTCGCAGTGTGTGTTTAATAGACTTATAGTGGCGGTGGGTGG
CGACGAGATGAGACGAGACTGGTGAGAGCGTGAGCTGGGAAGATGCGCGCGGTGGAAATT
CTTGCGAGCTAGCTAATCTGACAGCAACTTTCTCTCGAATTTACGCTGCGTGAGTGATGT
GATTCACGAACTAACTTGAGAGCCTGAACCCGAACCGAATGTGAATCTGCACCGCAGGCA
AGATTTCAACATCTTTTTAGGCAACCAAGGTGAAATTCCGCTGCATTTTTGAACCGTGTC
TGCGTTGTTTGTGTTTAAAATGCATTGCTGTTCACTATACTATACTCCCTCCCTTCCTAA
ATATAAGTCTTTGTACAGATTTCACTAGTGGACTACATATGAATGTATATGGACATACTT
TAGAGTGTACATTCAATCATTTTGCTCCGTATATGGACATCTAGTGAAATCGCTTAAAAG
ATTTATNNNTAGGAACGGAGGGAGTACATCTCAAACGATCACCCTTCAGCGTTGAGCGTA
TAGCGGTACGCGCCTTTGTTGACCACGTGTTGACCATGCCAAGGCGTCATCTCGAAGAAA
GCTCATCGATTTTCATGTTTTTTTGTACAAAACGCCCATGGTGTCAATTACAAATGGATA
AAATCCTCATCGCCTCTTTATCTTTGATCAAACCGAAGGAGGGTGTGGGCGTGTGGCGCG
ACGCTACGCATGGCGGAGAAAGGCGATCATCGCCGGTGGAGAGGCATCGGGAGGGTCGAG
TCGCGCGGTTGCGGGGCACAACACCTTCTCGCTGGAGAGGCGTCGCGACGATGGTCCCTG
TTCGTCGATCTAATGGTGCTCCGCCCTAAACTACAGTAAATTCCAATCTTTTTGATTAAC
TTTGTGATTCTCCGATTGCTAATCGCCCTATTCTGATACAAGCATCACAGTAAGAGTCTA
TTTGAGAGCTAATTCAGCAAAGTGTTAGTTGGCACGAGGCTAATGTTGGTGGTAGAGTGG
TAGTGTGCATAAAGAGAAGAAAAAAGAGCAATTGATCTTATGAAACAGGGGCAGAAGATG
CAGCAACTTATAGTGATTTGGATGATTCAAACTTTGATCCTCGTGCCATAGTGGAGAGTG
ACTATGACATTAGTGATGGTGATGATGATCTGTATGTTGACAATGTGGATATGAATGAAC
CTCGGAAGAGGAAGGACTAGCAGAACTAGAGAGTTCAAGATACTGAAAAAGAAAAGGGCT
CAAATAAAGGAAAGGAGAAATCTGGAGATAAAGAAAGAGAGTAGCAAGAAGATGCATTAT
ATGAATCTCAAGGTGATGATTTATGGCAAGCAAACTCACATGGTGAAGAAATTTACTTGA
TGTTTAAGGCTTTTACGGCAACGGACCTACACTGTCAAAAATTACATGTTGCCCAAGTTT
TCCAAACAGTTGAACTCTTGAATATTGTTGCAAAATAGAATTGATGTCAAGTTGCTCGTG
AATTATAGGAAAAGCTTGAAGGCCAAATGTGATGATGAATGTACTAGGTATCTGTGGGAT
TCTTATGGCAACATGACCAAATGCTTCGTGGTTGAACACACATGCCTAAGAAGTGGACAC
ATCAAAGCTTTCGCTCCTCCTTTCATGGCATGGAAAAGAGCAAATCAAGAAGCTTAAAAG
AAGGTTAAGAGAGAAGCAACTGCTGCAAAAGAACTTGCGGAGAGGCAAGCTGCTGCAACA
CAGAGAAGTAGATAGGGAAGTTGTTGCTGATGTTGCAAGGAAAGATGAAATGAGAAGAAG
AGTTGTTGCTACTTGTAAGAGACAAGTTGAGACAGAGCAACCATAACGTGATGAAGAGAT
GCTTCCTAAAAACGCCACTAGGGCATCTATGTTTGATATATCCATGGAGTAGGACTAGGA
CTCCTAGTAGTTTTTATGTCGAGATGTTGTCTCTTTCTCGTAACACTGTGAACCTTACAA
TGTTGGGAAGTGTTATAATTGATCAATACTAATCTTAGTTTGTCAATATGGATCAATTGT
TTGAACATGTATGCCCTACATTTTACTATCTTTGTCATAATGAATAAATCCTCCTTTTTG
CAATATCAAGCCTGTTATCGTTATATATTTTGCAATAGCTTCAAATGTTAGTGTTTGTTA
TTCTTTCAGCTATAATGTTACTAATTTCGCCATCATGCTTCAAATAGCATGAACTTTTTT
GTATCTAATTGTTATAGTTACAAAATTAGCCAATACATGGTCAATATCATTCAAATTGTT
GTAATTGTTACCATTTCATGGTCATCTTGCACCAATTAATCACAAATAAGTAACAATCAT
AACACCAACATCGACATTATATGCTCATTTAGCACCAACATGACAAGTATACGATCATCT
AGCACCAACAACTTTCCTTATAAAAGAAACTTAAATGAACACATTAATGACAAAAAAAGG
TGCACAACACAAGCACACATGCTCATTGAAATTTCAGAACCAATATCATGTCTTCCATCA
GCTCATACAAACCAAAAGAGGAATCATAACAACATATGAAAAAGAGGCCTTCCCAGCTTG
GAAACTTGATTTTTCGCCTAAACAAAGTAACTATTGCTACATGAAGAATTACATCTTCAA
AAGTGATACAACAAACAACACATACAACACAACGACTGTTGCCATCGTTGCCCTCGGAAC
CATCAGCATTTCCCTACTTAAACCTAAAATTCCAGCTCCATGATGTTTGATCATGCTACC
TACAACTCCAATGGCCTTGTTACTGCCTACTAGCCTCGGTCTTTCATTTCTTCTATCTCC
AGTGCCTCTGACATTACCTGCAAGCCAGCCCTTTCTTCCCTTGCTCGAATCAACTCTTCC
CTCTTTTCCTTTGCAACACCAATTGCATCTATTCCTTCATTACTAAGAAGGAACCGTTTA
TATATAATATATCAATGTAATTCAACTTTTAGTGCCACAACTCAATCCTATCAACCAAAT
AACCAAAAAAGTAACAATTATTTTTGCACATCATGCACCAAAATCCAACAACATGGAGAA
CAAGGGTCATGGGGGACTTACACCGTCATGCATGCACTTCTAGAAGACATACCTGTCATG
TTTGTCGGTGTTCGAGACACAAAACTTCACTCAAGTGCAACGGTGAGGGCATCTGATGAG
TTGCACCAGCACAGCCCGGTCGCTGAGAGCTGACGTGACATATATAGCTCATCGACATGG
CGAGGATGAACGCACACGCAACAATGGACTGACACGGTGGCAGTGGCGATGGAGAAAACG
AGTGGAATTAGAGCATCTATAGCCGGGCATGGTCCGAAGGTTGTTCAGAGTCTCGGATG