morexGenes - Barley RNA-seq Database

Contig contig_59751

Source Contig contig_59751

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_59751 (6977 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_59751

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_71395	3	2685 bp	MLOC_71395.2	Available	Available	LOC_Os03g08620.1, FRAME:+3, EVALUE:4e-107, 13103.m00997 protein B3 DNA binding domain containing protein, expressed
MLOC_71396	1	2013 bp	MLOC_71396.1	Available	Available	LOC_Os03g08610.1, FRAME:+2, EVALUE:0.0, 13103.m00995 protein leucine-rich repeat family protein, putative, expressed

CDS Structure of MLOC_71395

CDS Structure of MLOC_71396

Contig Sequence (6977 bp)

>contig_59751 6977 assembly3_WGSMorex_rbca.fasta
CCCGTCACCACCACCCTCATCCCGCCCAGCGCTGCTCGCCCGGAGGCCGCCGCCGCCGCC
GCAGCAGCAGCAGGGCAGCCGATCGATCCAGCCAAGCCAACCAACCACTCTTTCCCGCAG
ACCGGTCAACCCACCCAGCCACAACGAGCCACCGCTGTACTCGACCGAGCAGACGTTTGG
GCCCAATACCAGCCCACCCCTGCCCGGCCCGGCCCGGCCCGGCCCACCGTACCTGACGCG
TGGCAGAGTGGCAGACTCCAACGGTCGATTTCCACCGCGCTACGGCCCCGAGGAGGCGCA
TTGAAAAACCCCCCACACCCTCCCTCCACTCCCCGAAATCTCCGGCTTAAACCCTCGCCT
TCCTCCTCCTCCCCCCCAACCTCGGCCGGCAGCCTCCAAGAAACCCGACCCCATCACCGC
CTGCCGCTGCTCCGGGACCGAGTGGCCATGGCGGTCGAGAAGAAGGGGATGTCGGCGTAC
GAGGCGGAGCGGGAGAGGACGGTGGAGGAGAACAAGCGCAAGATGGAGGCGCTCAACCTG
CGCCACCTCTCCGCCGCCGTCGCCACCTGCGCCCCCAAGACCCCCTCCCCCATGGTGCCT
CCCTCCCTCCCTTTATGCACCCGGCCCGTTGGTCCAATCGGTCGCTCGCTGCCATTAATC
GCTTGTTTTCCTTTCTTGTGTTCGCGCATGACTGAGCAGAAGCACAAGAGGCGCAGGATC
ATCTACGCGGCGACCCCCGTCCCGTCTCCGCCGAGGAGGTCCCGCCGGCTCGCCCACCTC
CCCGAGGTCAAGTACGCCGACGCCTGCGCGGAGGTATCCATCCATCCATCCATCCACCGC
TTCCTGTTCCCCTTGCCTGATCTGTACCAATCTTTTGGGGGGAAGATGCTTAATGAATAA
ATGCGCCTGCTTCTTGTGGTTTTTTGCATACATACGTTTCTATTTCGTCCCTTGCGTAGC
TATAATCTGTCTTGTGCTGCCAGATGGCATCTGATTTTGTCCATCTTTTGGTGCGAGATG
GCAACTGATTTCGCCTTCCGCTCTCTCTTCTTCTTTACTGCCTAGTGCTGCCCATACTGT
AACTGCAAGCACACCCTGTTGCGGAAATGAAGATGATGTTTGTTTCACATTTTTATTTGT
TGAACTGTCCCACATCATGTCAATTTATTATCAACTAGTAAGAGTTAAAGCAACTAATTT
GACTTTTGCTCACTGATTTTACTGTAAAATCTCCTATCCTAAATGAATAGGCTTCAGGCA
TTGTGAGATGGCAACTGATTTATCCACATTTTGCTGTGAGATAGCAACTAATTTGCTTTT
TTACTCAGCTGTTTCTATTGCCTAGTGTTGCTCGTACTGTAATTGCAAGTGCAGCCTGTT
GCAAAACTGAAGATGATGTTTACTTCACATTTTTATCAGTTGAACTGTCCCAGGTTATGT
CAATATATTACCAACTAGTAAGAGTTAAAGCAACTAATTTGACATTTGCTCACTGTTTTT
ACTGTCTAGTGCTGCTCATACTGTAAGTACAGCCTGTTGCTGTACTGAAGATGATATTTG
CTTCACGTTTTTGTCTGTTGAATGCAAATTTAATATGAACTAGTAAGAGTTAAATCACAA
GTGTATGGGTAGCATTAACATAGGTGCTCTAGACCTGCTCTGCTTCTGTTCAGAGGCATC
TTGATTCTTTTCTATAAAATCTCCTATCCTAAAAGAAAAAGCTTCAGGCATTGTGAGATG
GCAACTGATATATCCACCTTTTGCTGTGAGATGGCAACTGATATATCCACCTTTGCTGTG
AGATGGCAACACTAATTTGCTTTTTACTCGCTGTTTTTACTGCCTAGTGCTGCTCATACT
GTAATTGCAAGTGCAGCCTGTTGCAGAACTGGAGATGATTTTACTACACTTTTATCTGTT
GAACCGTCCCAGATTATGTCAATTTATTATGAAGTAGTAAGAATAAAAACAAGTGTGTTA
TTCTAAATTTTCCTGGCAACTGCTTCTGCTCAGAGGCACCTTGTATTCTTTTCTGTAAAA
TCTCGTATCCTTAAGAGAAAGAGATTCAGGCATTGAGCCATTGTAGTATCGTCCCTGCTG
TAATCAACTGAATTCCATATTTGCTTCTCTGACAAGTAAGGTTTCTTTTCAATTGACAGG
TGGGAGAAGAGAGTGAGAGAGTGGGAAGGTTTGTGAATATGTGCTATCATTATCATAGGA
GCTTAAGACCTGTAATCTCTTCCATCGTGTGAAAAAACTTCATCCTATCTATCCATTTCT
TCTGCAGGTGGTCTCCAAGAAGACGAAGTGGCAGCATCTACTTAGCAGCAGGTGGACCAA
TTTCCATGAAAGCCAGGATGGAAGCAGCAAGCAAAGCTGAGGAGTTAGAATCACAACTTG
ACCCTGAATTTCCATCCTTCATGAAGCGGATGTTACATTCACATGTGGTGCGAGGGTTCT
GGTTGGTGAGTATTTCACTGCTATTACCTGTCTTCCAAATTAAATTCATTGCCCAACGAT
CTTGTATTCTCCTGCGTCCTAATTTTGTTGCATGGCATCAAAAGGGTCTGCCAAGCCATT
TCTGTGACACATACCTGCCAAAGAATGACTGCACCATCACTTTGGTGGATGAGAAAGATG
AAGAGTTTGAGTCCAAATACCTTGCCTACAAGAAGGGGCTAAGTGGTGGCTGGGCTGGTT
TTGCTCTGGATCATGTGATTCGGGATGGAGACTCGACAGTTTTTCAGCTGATCAAGCCTA
CAACCTTCAAGGTTTGAAAACCTTCTGGACACTAATATCTGAATGAACTTAAGATGGTTT
ATTTTCGACTACTGTGAATAACTGAATTTCTCTTCAGGTGCATATCATCCGAGCTACTGT
TGGTGATGATGATGATGAGGAGGAGGAAGCGGAGTGAGCGCGCCATGCAGCATCACTGCT
TAAGAACTAACCTATCAGTAGATTAGATGGTATGTAGGAGTTGGGTATGGCTTAAGCTTT
ATCTATCTGGAGATTAGATGGTACGTAGGAGTTGGGTATGGCTTAAGCTTTATCTATCTG
GAGATTAGATGGTATGTAGGACTTGGGCATGGCTTAAGCTTTATCTATCTGGATCGCCTG
TGCGGTTATGCATTTTGATGGAATGTCCACCAGTGGCTTACAAGATGGCAAGTAGGATTT
GGGGGCGTGGTGTAGGCTTTTGTGTATCAGGATTACCCGCGCAGCTATGTAATATGTTTC
CATGTCCACCAGTACTGATAATGAGATCAAATGGAAAGTAATCAGCTAATTGTGTGTCTG
TCTGCGACTACATTTTGCTGTCCTAAATGAAGTCTCTAATGTTAAGAGTACACATTTTGC
CTAAATGAAGTCTGTACACATTTTGCCTTAGATAGACCAGGAAATGATTCTCTGGCCTAA
AAATTGTACCTAAAGCCCTAAACTAGGAGAAGGCACAATGGCTCAAAAGGATGCCGAATA
TCATCACATCAATCTTCAGCTCACATATCACATGGTACATCAGTATCATCATCACCATCT
TACACTTTCTGAAGCCTTTCACTCTCCTCCCTTCTTCAAATTGTATCTCTTTGTTATACA
TAAGTGCACCATTAGATTAACAAGTTAGCATCACGATATTTCCTCCTTGCCAGCCTCATT
GAAGTTTGTTCCCCTCAGTCCTACCAGAAGTTATTCATGCAAACCATATCATCATGAGGA
GAAAGTAAACAACTTAAGCGAAGCGATTTGTTACTCGTGAATCGTCATACCGCATGACAA
GTCCAGGCTTGGTTTTCAGGCTTGGTGGTATCAGTCCGGAGAGATTGTTGTTGTTCAGGT
ACCTGGCGTTGTGCAGTGCAAATGTATCAGGGGGAGAAAGCCAGTAAAAAAACATCAGAT
AGAGAAATCAAGTTCTTACAACTCCTTGAGACTGGTGATGTTTCCCAGTGACGGGTTGAT
CGCTCCGCTGAACTGGTTGCCATCAAGATGCCTATTTTTCGAAATGTCGAATGTTAGCAT
CAATGAAAATAATCCTATTGATGTTCAAGAAATAGCCAGGTATGCATTGAGCTTACAATA
CAGTTAAGTTCTGCATGCTGCTTAAGTCAGGTATGGGTCCTGAGAGTTTGTTGCCACTGA
GAGAACTGCAGGGAGGGAGAATCAAATGCAAGATTAGAAGGAGTATTGTTTTTGTCCATT
TGACCCACAAGATTTGATTATTGTACAGCTTACATGGTATTCATCCCTGTCAAATTTCCA
ATGCTGTCTGGAAGAGATCCTGAAAGACTACGATTTTTTAGATCCCTGTAGTACAAAACA
GGGGTCATATTATTACAGAAATGGTCAGCACAGTTTACTGAATCTAAGTTTCATCTTTTT
TCAGCCACATGGTGTCACAGTTCCACTGGGCAAATTCGATCAAATTGATTTCAGCATGAG
TTTGTGTAATCTGAATGAAGGATACTTACAGTGACAAGACGCGCACGGGCGAGGCGTCGG
AGCAACCGACCCCGGTCCACGAGTTCTGCCGCGGCAGGCAGGGGTCGCCGGCCCAGTCGG
GCGGCGGGTTCTTGAAGCTCCTCGCGAGATCTTCCATTGCACCCACTGCACAATGTAGAA
GAAGCCTGAACTTTTTTATCACCCAAAACATTAATAATCCCACAAACCAAAGGGAAAAAC
CATTTCTGCATATATATGGACGAACAGTCTGAGTGCATCCGTACCATCTCTGGTGGCGGT
CCTGCCGCCGACGGGCACGATCTGGTAGATCTCGGCGGCGTTGATGAGCGGGCCGACGGG
GCAGGTCCCGTTGGGCGTGAGCAGGATCTCCGTCTTCCCGGCGAGCTGCATCATGTTGGA
GTAGACCATGACGCCGGCGGCGGAGGCGTTGAGCCCCCGGAAGAAGTCCTTGCCGTTCAT
GGCGACGTCGAAGACGCGCCAGCTGTAGGGGCTGGCCGTGCGCGGGTCCTGGAAGTAGAG
CGCCACGTAGTAGCTGGCGAAGGGCAGCTCCAGGGGCGGCCACTGCACGGTCAGCTTCTT
CCCCCGGCTCGTGGTGATCCCGCCCTTGAGCGCCTTGGCCGGCGGCAGGTTCCAGAAGTC
CGCCGGCGCGATCGACGAGTGGCTCTCCGTCGTCGGGTTGCCGTCCATGAACGGCGCCCA
GTACCGGTTGTACTGGTCATCTGGATAGCTAGAATTGGCAACGCCAAGCAGCAGCACGTC
ACGTTAGGATCGATCTCCATGGCATTGGCATTGGCATTGGCATGCATGCGCATCGATCAG
AGACGTGCAGCGACGGTGCGTACCTGATGATCTCGCCCTTGGCGCCCATGGCGCTGCGCG
TGACGGTGCTGAGGACGTACTTGCCGAAGTCGGTGGTGTTGTACATGGAGTCCTCGAGGT
TGACGAGCTCCAGGGAGGAGATGAAGGGGCTGGACTTGGTGTCGGGGCGGCGCGCCAGGC
AGACGCTCATGGACTTGCCCTGCGCCTGCGCCACCATCTCGAAGTAGGTGGACATGCCGC
GGCGGGCGCTGTCGGCGGTGTTGACGGCGCTCCATAGGGTGCCGTCGATGATCTGGTCGA
ACACGGCGGGCTCGGCGCCGCCGTCGAAGCCGCCGTAGAAGTAGGTGGTGCGGACCAGGT
AGCGCGAGCCCTTGACGGCGGGGACGGTGTAGCAGTACTTGCGGGCGGTGGCGTCCGGGA
AGTGGCGCAGCGTGGCGAGGACCGGGAGGATGTTGGGCTTGTCGACGGCGGAGGCGTTGC
CGACGGCGATGAAGCCCGCGTCCGGGACCCACTTGATGCTCCCGACCTGCACCTCCTTGT
CCGCCCCGCAGTTTATGTAGAAGCCTCTGGGTTGCGGGACGGCGGCGGGGGCGGGGGAAG
GGTCGCCGGCGCGGGAGGTGGCGGCGAGGAGGAGGAAGAAGAGGGGGAGGAGGAGGAAGG
CAATGGGGAGTGGCGGCATCGTAATGTCATAATAGGATTGGATGGATGGAGCGCCCGCGA
AGGGGAGGCTCCCGAGGAGAAGAGGCCAGGAAAGGGGGCCCCGGAAGGGAGGAGGGAGAT
GTTTATGGGTACGTCTGGACGAGCGCGCCGTCGCCGGATGCCATTGCCAGCCAGCCAGCC
GCACCACCAAACGGAGGTCGATCGCAGGGAGGAGGACGTACGGCTGGTCTTTTTCGTGCA
TGCATGCAGGGTCACCGCTTAAATATAGCATAAGTGTAAGGTTGAAGGGGTCAACGCAGC
GTGCTTGGGGGCCTCATGTCTTGGCCTCTTGGATGCGATCGGAGCGATCGACGGCGCGTT
GCGGTGGAGCACGCACGTCCATCTACCGGCCAGCCACACTGGTGCCCGCATTTTCTGGCT
TTGTTTTAGTCGTTCTCGCAAAGTTTGTCTAGTGGAAGAAGATGTTTTCTGTTGAAATAT
GCTTTCGCCCCGTTATATATAGCAACCACCAAATACAATTTTCCCGATCAACGCTGGGAC
GGACAGCACAAGCATGTCTAAAAGAAAATACAAAAGAAAATAAGAGAAAAAATGCGTCGG
ATCAACGAAAGCTACGGCTCCCCGCGATCGCTGTGCCCACCGAAGATAACCACCACGCTC
CGAAGCCACCGATTTGTCGTGTACTAAGCACCACCTTCAAGAAGGAATGCGACGATGTCG
ACGCTGCTGTCCGGAGGAATCTTAGGATTTCTTCCGGTACACGGAGGGTGGTGGGGTGAG
AGGGTCACCCGACGCCCTTCAAGAAGGATGGCGGCACCCGCATGCGTCACCTCGTTGGTG
CCGGCAAGACCCGACAGGGATTTCTCCCGACCCCTCGCACCAGCCACCCAAGACCAACCT
TCGGCTCCACCACACCCGCTGTCCACCAACATGCACCAACACAGTCACGAGGACACCGTC
GTCGTCTCACCACGGCCAACGAAGCGAGACCGGTCAGATCCAAACAAGACACCCGTAAAC
ACGGACCGACAACACCG