Contig Data
morexGenes
Links



Map Locations of contig_5974 (5845 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_5974

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71387 1 437 bp MLOC_71387.1 Available Available None





CDS Structure of MLOC_71387






Contig Sequence (5845 bp)

>contig_5974 5845 assembly3_WGSMorex_rbca.fasta
CCCTCTACGGCTTCGGCGGCTAGGCCGGCCCCCCTCCAGCCGGCTACCAGATTACTACTA
CAAGGCTAGTAGTATTTGTCTAGGGTTCGTGGTCTCTTCGGTGTTGTCTGCTCTGCTCTG
CTCTGTTCCTGCGTGATGTTGGGATTGATGTACTAGTGCCAAAGACTGAATGAAAAATCG
AATTTGGAAATTACAGTGACGTTTGCCCTTGAGAGTTCACCTGCATTCCCCTGCCCAGTT
CGTTGATTTGTGCGTGATGTTCAATCTTACCATTCCGTGTCTCTGTATCACACTGCCCCC
AAATCAAGCTGCCCGTGTTTTATTTCTGAGACCTCCCTGCATTTTTATATTCCTCTTGAG
GGAGGAAGTTAGCCTAGTTCTTCTGCCCATTCATCTGTGGTCTGCGCCTGTTGATACTCA
GAATGAAAATACTGTTGGAGATCTATACTGTACATGTCAAAATGCCGTGTTATTACGTGT
ACACCATTAAAGAACTATGAGATTGCAGCGTCGTTTGGCCCTTAATTCACCTTCAATCTC
TTGCTCGGTTGATTTCTAGTGTTTGTGCAGGATGCTGAATCTCATCAGTTCGTCCTTTCC
AATATCTCTTTCCGTGGCCGTGTATCAAATTGGGCCCAAATCAAGCTGGCTGGTTTTGCC
TTTACCTGCTCTTGTGACTTGCCTGCATTTTGTGTAATGGCCATCGCCTTCCATAGAGTT
GAGGTAGGCTTGTGACTCACCTCCTGCATTTTCTGTTTGCCTCTGCAGTTACTGTGTTTG
AATCATATATTTTCAGAACGAAAATACAGTTGGGAGTTTTAAAAGTTTTCTCTGAACAGG
AAGGTGGCCTTTCTGTACTGTACATGTCGAAAATACTGCGTTATCAAGTGTACAACATCA
GTGATAAACTTTACAGTTCGGCTTGATGCATGCATAGAAACATGGTTAGCAGATCTCCAG
TTGTTTGCAATCTGAGTGATGATAAAATAGCCTTTCCGCGTCCAGTCTACTCTGTACACC
GTATGATTATCATGGACATCGACTACTTCTGTGTCTCCTTCAATCTCCGTGCATACTTCT
TAACCCTCATCCACGCCTTAGTGCACACAAGGGGATTTATACGAGTATTGTCAAATTGTT
ACTTGAGCATCTTTAATCCTGGTATTCGCTGATGGTAAGTCATGCTGGCATCTGAACTAA
GTGCTGGGTCCAAGATTTCTGCTGCGAGTGGTGTTGCCTAGTAGGTAGCTTGGAAATGAC
TATGTTCTTGATTTCAAAACAAAAGAGCTTGTATTATAATTAAACAGGATCATGGTCCTT
TCTGGTACAAGCTACTAGCAACACAGGAATATAATTGATCCATAAGACCATAAGCATATA
TGTCTAACTGGTTAGCCTGTTTTGTGCAAAGATGAGCAAGATCATTTGCTTCTCTCTTGG
TAAACTGAAGTTGGAAGTGTTCCATATTCTCAGTAAGCTGCAGAACTTCATGTAAAGTCG
CTGTGATCTCTGATCGGTCATAAGTGTTGGCTTTCTCAGTTAAAAGAGTCAGTTATGCAC
TATGTTGTACTTCCTCCGCTTCTATTTTTTTTTAGAGATTTTAATAAAAACTATGTACGG
ATGTATAAACATATTTTAAAGTATATATATATATATATTCACTTATTTTGCTCCGTATGT
GGTTCGTAATGAAATCTCTAAAAAAGACTTGTATTTAGAGCATCTCTACCCGTGCCCCTA
AGATGCCCTCAGGACAACTTTTTTAGGTTCGGTATTAGGCTCGGAGGCGCCATTTGGCAA
AAAAACGGCCCAGCCACGCTCCCAGCGCCCCAGGACGTAAAAATAGCGCTGGCATATCCC
AGGCGAAACCCGGTGTGAAGGTGTGTGGTGGTTCTTGAGAACGAAAGTTTTGACGATTCA
CATCTTTCCATGTGTCTTTTTTTGGCACATAATAATTGCCCGTTATTGTTAACCTCTGTC
AAGTTCAGCCCTAGATGCTGCAGCATTTTTAGGGACCTCCTATTCGCAGCTTATTGCGGC
AAGTTCTAGGGGTTTCGCAGAGGGCGCCACGCACCATGGGCCGGCCCATTTGGGGTAGCT
TAGTGAAACAAAAGTTAAAAAACCGCTTGCAATAGGAATCGAACCAAAAAACTGTCTCTC
ACGCACATACCCCCATAGGCACCACAACAAGCACGCCCCAGGTGACACATTTACAGGGCG
GAACTTAAAGAAACTAAAAGCAGACAAAAAAAACAAAACAGCACGTGAAATTTCCAAAAA
GTATTTTATAAAACATTTTTTTCAAATTCCAGAACATTTTTTTCAAATTTTGAAATAATT
TTTATGAAAAATCAAAAACATTTTGAAACAATTTTTTGAAAAGTCAGTAACATTTTTTTC
AAGTTCCAGAACATTGTTTTTTCAAATTCTGGAATATTTCCTAAAATTTTGGAACACTAT
TTCAAATCCAGAACATTTTAAAGTTCCGGGATATTTTTACAAACTCCGTAAAAAACAATT
CATATCCGGGAACATTTTTTCGAATTCCGGAAACATTTTTTAAAAATCCAGAACATTTTG
ATAAAATTCCGGAACATTTTTGAAAATTACAGAATATTTTTGAAAATTCCGAAACATTTC
TCAATTTCCGAAACATTTTCACAAATTCCGGAACACTTTTTGAAATTCTAAAACATTTAT
TAAAAATCAAGAACATTTTTGAAACAGAAAACAGAAAAAAGAACAAAAAAGAATAAAGAA
AAAAGAAAATGAAAAAAAAGAAAAAACGGTTCAGGAAATCTGCTAGAAAATTACCAAAAC
CAGAAAAAACCGATTGGAAACCTCTAGAAGGTTTCCAAAACAGGATCGATGAAAGTATTA
ACGGGCCGGTCCAAACCCCGTCGCTCACTCGCAACTCCTTTGCGGAAGGTCGACAATCTG
CCACGTGGGCCCAAGGTGGAAAGCACGACAGGCTCGCTCGAGTATGCCTCTGCAAGTTTA
TTCTATAATTTCCTAAAAATATATTTGTTGGCAAATGTATACAACTGAAATGTCAAAAAA
GTAAAAAATAAAAGGGTCTGGCTATATATCATCTAGATGTGAAATAATACCTCACATCTA
AATATTGTTGTCCTCTTAGGTTGTAAATTGTGCTGCTTCTTTCTGATGGGGCATCCTTTT
TTTTGGCTGTACCTTTCTTTTGGTTGCACGGTGTTCTTGTTTTAGTTTTTTAAGGCAAAG
TGTTTTTGTTTTAGCTGGGTTATACGTTGTTTTTTTTGCCTCTATGATTGATTTTTTTAG
TTGTCATGACATAACATGGGTTGTTTCTGTGTAAAAAAGACACACCAAAATGACATGTTT
TGTACGCGACTAAAAAATATTGATATTTTTATTTAGTTGCGTATCGAGGGCGGACTTGCA
ATTGGGTAAAAAAAGGGTGCCCCCCGAGTCGCGTGTCGGAGATGAAGTCGCAACTACGAA
AAAGGATGGGTCCCCAATTGCGTGTGAAGGATGGACTTGCAACTGGAACAAAGTGGCTTG
GGCTGAGTTGCGTATCGAGCGTGGACTTGCAACTCGAACTAAAATTGACCCCAATTGCAT
GTCGGTGTTTGAGTTGTAACCGTTAAAAAATGTTGCCACTCTCCTTAGTTGCGTGTCAAG
GATGAACTTGTAATTGGGACAAAAAAAATAGGCAGGTCTTAGTTGTGTATCAAGGATAGA
CTTGCAATAAGGACAACAAAAAGGGTCACCCCGAGTTGCACGTCGCGAATGGAGTTGCAA
CTGCGGCAAAAAGGATCGGGCCCCAAATTGCGTGTCAAGGTGGACTTGCAAGTGAAAAAA
GTGGGTTGGGATGAGTTGTGTATCAAGGATGGACTTACAATTGGAACAAAAAGAAGTGGT
CCCCCAATTGTAGGTGAGTGATAGATTTGCAACGGGGACAAAAGTGGATCGACCCCCTCC
CCTAGTTGCGTGTCGTGGGTGGACGTAGAATTGGGACAAAAAGTGAACAGAGCCCAGTTG
CGTAATTAAGGTGGATTTATAACTGGGACAAAAAGAGTTTAACCCCAATTGCATGTCGGA
GGTGGAATTTCAGCTAGGATAAAAGGGTGACCCCCTAGTTTATGCGTCGAAGGTGAAATT
GCAGGTGAGAGAAAAATGGGTCGGGCAAGTTGAGTATTGAGCATGGACTTGCAACTGAGA
CAAAGAAAATTGCTTACCACGTGTGGAGCTGCAACTCGGACAAAAAAAATCCCCCCCAAT
TACATGTTGAGAATCGATTTGCACTAAGGACAAAAAATGATCGAGTCTAGCTACCTACCG
AGCACAAGCCAAAGCCTATCTCTTCCATAGAGCTTATCTCTCGTGAGTGAACGTGAAAGA
AAATAGATATAGACATTGACAAGCAATAGATATGACAAATTATAGATAGAACAATGTGAC
ACAAGAGTACATCGGCTGACAACATGAGACCAATAGTTTGCGTGAAAATTAAAACAATAC
AATCCTCTAAAGAAGAGAGACAAAATATTCCTGAAAATGGCCCACATAAACAAACATGTG
GGCGCGAAATGCAAGCGATACATGAGGGCCCGTGCCCGACAAAAACATCAAGCGATCAAA
AGTTCGCACAAGATTTACAACAACATGTCAAACGGATAGGAACTGAAATGCGACATCGCT
AAATCACATCTAGCTAAGATTTAGCTAACAAAGGATGAAAATAAAATATTACCAAAAGAA
AAAGTATGTTCACAAATTTAACAAGTAATCACGAAACGAAAAAAGTTCATAAATTTGGAA
AGGTGTTCAAAAAATTTGTGCACCAATTAGATAAAATGAGGAAAATAAATAAAAAAGATT
TATGCACGACGGGTTGACATACAAGTAAGTTAAGGTCCGATAAATTGCGTGTCTAGGATG
GACATGTAGCAAGATCAGGATCGGACAAGTTGCATGATCAAGATGCACATGCAACTAGGT
TGAAACGGAGTATGTCGTATGCCAAAATTAGACATATAAATGAATTTGAAGCAAGTTTAT
GTGCGTTCAAAATAGATATGAAACATATAATTCCCTTCAAGTGCTCGTCGTTGCTATGCC
GACTCTTCGTTTTCGACGAAAAGAAGAACGAGAGTGAAAAGAGAGAGTGAGAAATAGGAT
GGAAAGTCCTGAAGAAAATGCATGCCCGCGTCTTCCTATTCTATGCATGACCCAAGTACA
AACATCAGAAAATGGCTAACGTCTAAAAAAAAAAACTAGAAAAAAGCTATGTTGATACTG
CTAGCGCATATAAATCAACTGCCCAAGAATAGGAGACAGCCCATATAAACCAACAAGCCT
AGAAGGCCGACACAGCCTGGCGAACCAATTGACAAGGACATGAGGAGCAAATCAACAGTT
CGCAGAGTATTTTAGCTTTTGATCATGTGATGGACAATTCAGGTATGAGGTAGCTATTTT
ACATCTGGACGTGGAATACTTCCTTCATCCGGATGTGAGGTAGCTATTTTAATTTTAGAT
ACATTTATTTTGATTTATTTATGCAATAAATAATTTTTTGAAACAAATACCACTATATTA
AACAGGAGGCATAGCAATATCGCTAGCCACCACACCAACAACACCATTTGGTACATCATC
TGGCCATAGGAGACCACAACCGGCAACACCCGACACCCTTAACGCCATCATAGCATGCGT
CACTTTATTACAGTTTCTCCTACAGAATCTAAATGAAAAATTGGAGAAATTCAGACCAGC
GAGCATCTGTGCATCCCGCACCATAACACCAATTTGTGATCTATCATACTCCTCCTTAGT
CAGTGCATCCACAAGAACCTTGGAG