Contig Data
morexGenes
Links



Map Locations of contig_59581 (6319 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_59581

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71312 4 1127 bp AK251544.1 Available Available None





CDS Structure of MLOC_71312






Contig Sequence (6319 bp)

>contig_59581 6319 assembly3_WGSMorex_rbca.fasta
AGAAGACAGTAACATATTAATTCAGATCAACATATGTGTCACAGTTAGCATGTCTTTTTC
TGAAAAAAATTGTAGATGGTTGATCAAATATAATATAGGCATCCATATTACAGGATATAT
GACATTTCATTGTCACATCAAAAGTTAAAAAGGGGTACTGTTTCTACCTGGTAGCACCGA
GGCCAACATTATGTGGGAAGATGGTAGCTTTGTACACGTTGTTGTGACCGTGCACAGCAT
CAATACCGTAGATCATCGGAATGCCTAGGCGGGTAGAAAGGGCGCCCTTTTGCATTTCAT
TCACCATCGACTGCCAAGCCGCAGCGGATGCTTGAGGAGAAGGCACACTGCCTCCACCAC
TCAGTACGCTACCTGCATCATACAAAATGTTATTACAGACAACCCTTCACAATCTGCAGT
TATTAATTTAGCGCAAGGGAAGCGAGAGGCACCTATGAAGTACTTGGACATGGCCTCTGC
CGTGGCATTCTCCCTCTCGATCTGGGTCATCTGGCCTATCTTTTCAGCGAGAGTCATCCG
ACCAAGCAGATCCTTGATGCGAACGCCAAGAGGCTGCTTCGGATCCTTGTACTTGAGATA
ATCCGCGCTTCCCAACGCCGCCAAGCAGAACATGAGGAGAACAAAGGTGGTCTTGTGCAA
GTTCCCCATCTTGGCACTGTGTCTGGTACCGATCACCACCGACTGTATATATAGACCTGG
GGAAAGGATGCTACTCATGTGAGCAAACATTCAATGAAGCTTTCGCAACAAGGAAAAAAA
TCAAAGATGAGCTAGCTAGTGCAAGGAAAGATTCATGTTTGAAAACACAGATAAAAGGCC
TCGTGTTAGGCGGGCCTAGTCCACTCGAAGGCTCCACTGTTGGCCATAGCCATCATAGAG
CAGCAAGATACAATGGCCTAGCAGTGTAAAGAAAGACTAGTGTTTGAAAATAAGCACACG
AGAACCAAACGTTAGGCTAGGCCATTCAAAGGCTCCCTTGCTGCTGGCTATAGGCATCAT
AGAGAAGTAGTGAGGCACAAGGGAACATGTGCTTTACTTAAAGCAAAGCAGGTAGTTTTT
TGTCGATACTTTCACTGTCCGAAAACTATAGTTGCTGTAAGCCCGCATGATCATCGGCAA
AACAGCAAGCCATGTAAACCCCAACGGCCACGGAAACCTTGATAATTGGAGAGAAGAGAA
CACCTAAAAGCTCACATACAGTACACTCGAAGGACATAACTGCAACTGCAAGCATGTATG
TATGTATGTATACCTCAAAAGGGGCAGCAAGCAATCCGCCGCATGCGCACGAACACGAAC
TCAGGACACCGATGATACCTTCCGGCAAGAGCAAGATGAAACCGGCAAAAAGATGTCTAG
CGGTTGCTGCCTTGCCTGGGAAGGAGAAGTGTGAGAGGAAGGGAAGCCCATTGGTGCTCC
TTATAATAGCCCCCCAGTTTCAGTGAGCACCCCCTCACGGGGGGAGTGCCGCCGCCGACG
CGAGAATCGCAAGGCAACGAAGGGAAAGACCGAAAGCGAAGGAAGGAAATCATTTGATTT
GATAGATTAGCAGCAGCACGGGCAATACCCCACGCGCTTAGCTGCGTCGACGACGACGGC
CACGGCGGCTAATATAAAACAAAATCCATTTTTCTTTATATCTGAAACGAATAAGCGATC
CCCACTACGCACATTTCTCGCCCCACTGCTGCCGCGCCCACGCCCACAAGAGTGGAGAGA
GGTCGACGCAGTCTCCACGGGCAGCATCTTATCGGCTGGGCCGTCGCTGTGCGCGAGATC
ACCCGCTAACTAAATTATTAATTTCCCCGTTGATGGTTGATCCCACTGACGGACCGCTCT
GACTAGTACACTTATGCTACAGAGCGCAGCGCAGTCCATGCTCCGCGCACAACCACGCAC
ATTCGGCGACTACGCACACGTACTAGGAGAGAAGTGGGGGACTGGAGAGGCCCGTCTCAC
CGGCCGCCCACCGGGCGGCGACGAATTTTCCGGCTGGATCTCCTCTCCGGCCGAAGGGGA
CACGGCACCTAGACGGACGAAATAATCGCGGCAGCACCGTCGTCGAGCGAGCCTCTGGGT
CCGGGACGCGAATTCCTTGCCCTGCTTTGCCGTGGAATGGGAAGGCTTAACCACCGCCGA
CCGGAAGGAAAACCTCCAAATTAACGCTGGGCTCGCACGAATAGCAGTGCTACTAACCGT
CATACAAACTACTAGTGGAGTAGTAATAACCATGAAAATGTAGATACAGTTTCAGCGGGG
CGGCGTGCAAGCATAGGGGATACGACCGGGAGACACGGATCGTGACTGATTACTGGCGAC
CATGAGTGCTTGCGTGCGGGCGGGCGGCCACGCACGCACGGGGGAGTCAAACCGGAGGTG
GCGGGCTCGCTCTTCACTCGCTCCGGATTCCACTGCTCCATGAGTGCCCCCCGCCCAAGC
CATGGAACATGGCCATGGATGGGAACACAAGAGCCACCATTATCTACTAGACTAGTAGAA
TGCCACAACCACCAGACTAAACCACGAGACAGGGACGCGGGTCGCTCGCAAATCCACATC
CAACCGCCACGACACCCAGGCAGATTCTCGTTTTGGAGCCGCTCCCGAAAGGGTCGGTGC
CGGTGGTGCCGGCAAACCTGGAGCGCAGAGCGGAGCACTCCACTCGCAGGTGGCACGCGC
ACGCGCGTCGCGTCGCGTCACCGGTGACGGCGACGGCGACGGCGAGGAAGAAGAAACCAA
ACAACCAACCAACCAACCAATCAACGAGCCAAGGGAGAGGAAGGAAGGAGGGAGGGGAGG
CCGACGGCATACCAGTCAGTTTACCACGGTGACGACGGCCGGGCGAGGCGGCGGCGTGCG
GCGGGAGGCCGCGAGTCACGGGGATGGCGAGCTCTGGGCACTGCGCAGCGGACCACACAG
CACAGATCGGAGGACGACGTTGGCACTGGCGGACGATGATAGCGCAGGCTTTTATTGCCC
CCCTTGCACAGGCCCTGCCGCCGCTGCAAACGCTTTCTGTGATTTCTTTTGGTGATTATA
TTATTAGTGACTGCCATCACTGCTTTCCAATTTCACCCCAGGGAGGGAATCCAACGACGG
ACAGGCGCGCTTTGACCGTGACGGATGTCGGGCGGCGCTACGTTCACACCCACGTCCAGC
GCGCCACGCCGCTGACCCCCTGGCCCCCAACCGCGCGCGCGTGACCCCCGCACACGGCCG
GGACCACGAGCCTGTATTTACTTACTACTACTGACCTTCTGGGCCCACCTTTCCGCTGGA
TTACTTGTACTCGTGGTAGGCTCGGGAGCCGCGCCGTATACCTCGGTTTATCGTTCGCAG
CGCACCGTCCATGTCTTTTTTTTTTCCTTCAGCAAAGCATCAGGACTAAACTATCGGATT
AGTGGTCCGTTTTGATTAGCAGCACGGTGAGCGTGCGCGCTAATCACCGTGCCCGCTCCT
CCGGTCAGTCCAGGTACAGAAGGTGGCAACGGCTAGAAACCGAAACCCATCATTAATCCA
TGCTGGTGTGAATGAACCGTCCCTCCTCTGCTCCATCAATCAGTCTACCCTCCTTATCAC
TCCAGCGAAGCATGCACCAAGACTAGCTTAGCTTAGCCAGGACGTGCCATGCCCCAGCCG
CCAGGTGGGACGCGGAAAAAATGTCAAAGATGGTAGTAGCAGCGGCGTCATCTCCTCGCC
AGTGGCTACGGGCTATGCCGCGAAGGGCGTGCCGCTGCGGATCGACTGGTCGTGATCGGA
TAATGAAAGGCGTTTACCAAAAAGGAAAAAAAGAGAGAGATGAAGATAAGATAAAACTCA
AGTTGGAACTGAACAGTGCGTGCATGTGCCCCGCTGCCATTGAAAATGCGCGCCACCCCT
TATCTTCGAGGTCACGTTAAAGTTCGGACTGCAAGATCCGGATCGAGTTTTCAGCAGTAG
GAAAAAAGAAAAAGGGAGCTCAAGATCCAGATCACGATCCAGAGCTCCAAGCCCTTGTCT
GCTAACTAACTGGGCTGTTAATTAAATATAATATAGTAATCGCATCGTGTCGAGATGTGT
AGGTAGGCGTCCAAGAAGTGTTCTGATGAGACGATATCCCGTAGAGTGCTGAACATGCTC
TTCACTCACTGGACAAATGATCGATCACAAAGTGCAGGGCGTGGTGGTTGAGCCGTATCG
GGAGCGTATGGACGGAATAGAGACAGTGCAAACGGACGACGTGACGAACAATTACATTAC
AATGCAATAAAACAAGAATACAACTGGTGTGTGCTGGCACGTACGAGTATGTACAACTTC
AGTAGTAGAACATGGAGTAGTCAGGGTGTGAGTAAAGACAGTGGGGGCAGGTAGCAGCTG
CACATGCATGCATGCATGCATGCATGCAGCGAGCGCCCGTCCAGTCCAGGCGTGCGGCCA
GCCAGGCAAGCAGGTAAATGCGCCGGACACGCCATGGCTGTAGTGGCGCACGGGAGTGAA
CAGACAGAGGAGGTAATTAATGGCCGAGGAAGCCTCTGTGCGCCGTGGTACCGCTGCAAC
TTGGGCAGGTACTGCTTGGTTTATTCACGTGAAGGAATTTACGGCTGTACGCAGATCGTC
GAGGCTTTATTACCTGTCCAAACAAACTGATCAGCTCTTACGATTGTCTTGTTCTGAAAC
AAAGTGGTTGAGATGCGGCACTTGTTTCTACTATTTTTTTAAAGATCAGAAAAATGTTAT
CGAGATGGGATCTAGGAGTACAGGAGAGGTATCCAAAAAAAGGTCCTGGATGGCTGGCGC
AGCCATGAGGCCACGAGCAAGGAGCAACTCGATGCACAGGTCAGGCGTTTGCTTTTTGGA
ACTTGGACGCACCCACATGCGCACCGTGTTACTAGAGCGGCTTTGGTTACCAAGGGATGG
ATACGCGCCGGTGCCATTAATCAGGACCGACCCGGGCGCGGCACCTGCTCCTTCCCACTT
GGCCGCCATTACCGATGAACGCTGATGCAAGTTGCTGTCGCCGGTGCCGGGAGTACAACA
GTACGCACAAGCTCGACATGTACCCGAGTAGTAGGAGCGCGTACTGTACGTGTTTGTTTT
GTTGTTTCCTGCGCGTAATTTGGGTCGACAGTTCGCTGGATCGGGGTGGAGAAGAAAGGA
GCCGCCGGGTTATTCAAATTGGAACTAAGCTCGGGGCCTTCTGGCAGTGGTGCGTGCACT
CTCATCATGTGCGTTGAGCTAGCAGCCGGCCCGGGAATCTGAACCACCCGGGTAAAATAG
GCAGAAAGGTGAGGACCCGGCGTTTATGCCACAGCCTTTTTTTGTCAGGCGAGTTTTTTT
TTTTTTTAGACAAAGTTTTTATGCTACAGCTGTGGGTTGGCGGCTCTAGCTGGGCGTGGG
GCCGCCTGGCCAGCAGAACGAAGAGGACGAGTGGTAGTACAAGAGAGCGAACATTCCAGG
TTGCAAAGGCCGAAAGCGCGCACCCAGTGGGCCGGGGAGTGGGGACTGGCCAGCCGAACC
CCTCAAAAAAAAAAAAAAAAACCAAAGCAAAGCCGGGCGAGCCGGTGTGTGCGTGCATGC
GTCGAATCTGCAATCGCGGCGTCGTCGTCCGCGTGTGTACGGTAATCATGCAGCGTCGAC
GACGTGATTGGAGGACATGGAGGGGGGGCTACCTAGATCACGCGTACGTGCCCGGACAGC
CCGGCCGTAGGCCCGCCCGTCCCGCGTGCCCCGGATGCGGACGGGGAAACGCAGCAAATA
CGTACGTGCCCTCCACACGACAAATCGTTGTATCTTTCCGTGGACCACGCGTCTTTGGTG
TCTCGTGCATGGAACACAGGGGAGGGAGGGAAAGTGGCATGGCATCTTGCATGTCACGGG
CTACTGTTGAACGGGAAGGGCGATGGGCTGCGGTGAAGCCGGAGCCCTGAGGCATCGCTT
TGCGCGACGGGCCTGGCCTCAAACTCGCGGGTGGGAGGAGGTTGGGCCGAGATACAACGC
GATGCTGCTCGCTGGGTACCGGTTCTGCTGTACAGGTTTCTCAAAAAAAAAAAAGGCTTT
GCTGTACATTTGTTAGTACCACATCGCGTGCGTAAGCAAGATCGGACGTGTTTATAACCT
TGTTGGGTTAGTAGGCTATCACCACGCGTCAGGCCTGGCTAGCAATCTCAAATCATGAAT
ATGCAATTACTTCCTCTGTTTCTAAATATATACTAGCAAAAGGGCCGGTGCATTGCAACG
AAAGAAAAAAAAATACCACATGTTTTTAATCTTTTTATAATCATTTTAATTTATTAAAAT
AATAAGCTAACTAACTAAT