Contig Data
morexGenes
Links



Map Locations of contig_59405 (2785 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_59405

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71242 1 864 bp MLOC_71242.1 Available Available LOC_Os10g34920.1, FRAME:+2, EVALUE:2e-90, 13110.m03119 protein secretory protein, putative, expressed





CDS Structure of MLOC_71242






Contig Sequence (2785 bp)

>contig_59405 2785 assembly3_WGSMorex_rbca.fasta
ATTAAACGTTAGTTTCATTCCGCATTTGTTCAAGTCTAAACTGTAATTATTTTAAAGCGC
CTATTCGCCCCCCTTTAGGCGACATTCACGTCCTTTCACCTAGGTAGTACCATTTGTCAT
AGTTGTGGCTCTTGATGGTAACATTTACGGGTGGGCTGTTGCTTTCCGCAAGACTTGCAA
ACACCAATGAGCGTTGAAGCATGTTGATCTCATTATGCGATCCGGCCATGCCGAAGAAAG
AGTGCCGGATCCAGAGATCTTGTGTGGCCACAACCTCAAATATGACAGCTCAAACCCGAA
CATGGCCCTTATACTGCCCTTGCCAAGAAGTAGGGCAGTTCTTCCACTCACGGTGCATGT
AGTCTATGCTGCCAAACATCCGTGGGAAGCCCGTGCTGGCATTCATCGCCACGAAGCGGG
TTGTATCTTGAGGAGTGGGCTCTCTCAAGTACTCAGGGCCAAACACAGCAATCACAGCCG
TGCATAACCTGTACATGGACTCTAGGATTGTAGACTCACTCATACGAACGTACTCATCAA
TGAGATTACCGGGCACTCCGTATGCAACCATCTGGATAGCTGCAGTGCATTTCTGATATG
ATGAGAAGCCAATTTTTCCAAGGGCGTCCTTTTTGCACTTGAAATAGTTATCATATCCAA
CCACCCCTCTCTAATACGGTTGAAAACATGCCTAGCCATACGAAAACGCCGCCGGAATTT
CCGATGTTTGAACATCTGTTTGGTTGTGTCAAAGTAGTCCTTCCAAAGAAGGAAACGACC
GCTCTCTTGGTTATGATTCAATGCCGGAAGGTGTCCTGTGACCGAACCACTCAACAACGG
CCGCTGGCTATTAAGATGGTGATGGACCAACACGGCAACCAAGATCTCCTCCTCCTCATC
GGACATGGAATCGTCGGAGCCGCAAAGTAAATTGTGGAAAAAGAACTCATCGGCGGAGTT
CATTTTGTATCTTGGCAAACTGTTGAACAGCTTGCGGACGTCGTCGAAGAAGCTGGTCGG
CGAAGAGACGCGCGCCTCCCTTGGACCAGGTGGCTGGCGTGGATAAGTCCTGGCGGTGAG
ACGGTGGTGGCCGCGAGGTGGTGACATTGGGGGGAGGTGTGTCGGCACCGGCAAATGGCC
GACTGCGACAACAGGACGGAGGCATGCAAGGGTTTGCTGTCGATATGGGGTGAAAGAGGA
GAGCCAATGTGCCACCGACTAGCGGACGAGGGAGAGGAGTAGGCGGGTGCCGCCCGCGTC
CGTCTGTTTTCCGCGACGACGCAAATCAAGTTCAAAAATGAATCGAAAATGGATCAACAC
GCAAACGAAAAACATACGCGCATCCGTTTAAATCGACGTGTTGGACCGACTTTTTTATCC
ATGAGACTCAAACGTACGCCAGTAGACGAAATGTATGGAGGGGTTGGAGTTGCTACACGT
GGGATACACGATGATGAGACGGATAAACAAAGATAAGTCTTGCGGTGCAGATAAGGCTTG
TAGTGCAGTTCTGTTTCAGGAAATCAGGAGAGAAACAGACAAATATATCCGAATTTTTTA
TGTGAAGACAACGTAATCCTCCGAACTTTCTTGCATCACATTTTTTGCAGAGATCGGGCC
ACCAAAGTAGACCAAGTCAAGTCAGTGTTTTTGACTGAAGTTAACACGTAGTACCACTAC
CATCAGGCATGAGCACCCTATATATAATCCCGTAGCACAGGCAGCAAATCACATCTACCA
CTAGCTCAGCGACACAGGCACGTAGTAGCAACACCCACTACAAAATGAAGCTTCAGGTAG
CCACGGTCGCCTCTTTCCTCCTGGTGGCCTTGGCCGCGACGGCCCAGGCAGTGACGTTCG
ACGCGTCGAACAAGGCGTCGGGCACCTCCGGCGGCCGGCTGTTCGAGCAGGCCGTCGGCC
TCCCGTACTCCAAGAAGGTCCTCTCCGAGGCCTCCGCCTTCATCTGGAAAACCTTCAACC
AGCGCGCCGTCGGCGACCGCAAGCCTGTCAACGCCGTCACCCTCGTCGTCGAGGACATCA
GCGGCGTCGCCTTCACCAGCGCCAACGGCATCCACCTCAGCGCCCAGTACGTCGCCAGCA
TCTCCGGCGATGTCAAGAAGGAGGTGACCGGCGTGCTGTACCACGAGGCGACGCACGTGT
GGCAGTGGAACGGGCAGGGCAAGGCGAACGGCGGGCTCATCGAGGGGATCGCCGACTACG
TGCGGCTCAAGGCCGGGTTCGCGCCGGGGCACTGGGTGAAGCCGGGGCAGGGAGACCGGT
GGGATCAGGGGTACGACGTCACGGCGAGGTTCCTCGACTACTGCGACTCACTGAAGCCCG
GGTTCGTCGCGCAGCTCAACGCCAAGATGAAGAGTGGGTACACCGACGACTTCTTCGCGC
AGATTCTCGGCAAGAACGTGCAGCAGCTGTGGCGGGACTACAAATCCAAGTTTGGAGCCT
GAATACACGATTAGCCTACTTGACGGTGTGATGGCATAGCACGCTATATATATCGAAATG
ATCAACAAAACAAGTGCTTTATGCCCTGTATAATAAATAAAAGATAAATAAAACGACTTT
GGTAATTCAAAATCGACGCCGAGTTACATGTTGCCTACTTTGAATATAAGACCTATTAGA
ATTTTTTATGAACTATATACAAAATAAAATAAATAAATTTATATTTTAAAATATGTCTAT
ATATATTCGTGTGTAATTTATAGTTAATTTGTTGAGTTTTTTTATATTTAAGAATGGATG
GAGTAGTACCAACACTAGTGGAAAA