Map Locations of contig_59386 (8441 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_59386

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71233 4 2154 bp MLOC_71233.2 Available Available LOC_Os10g11354.1, FRAME:-1, EVALUE:0.0, 13110.m01034 protein MATE efflux family protein, putative, expressed





CDS Structure of MLOC_71233






Contig Sequence (8441 bp)

>contig_59386 8441 assembly3_WGSMorex_rbca.fasta
CGGGCTGCGCCAAGCCCGGCCCGGCTGTTTACCTTCATTTGGTTTATACAAGATATACAG
TATCATTTTTTAAGGCCGAGCCTCGAATTGGGAAGCGCATAATTTAGCTGAATTTTATAC
TTCCTCTGTTTCAAAATAAGTGACTCGAATTTATAATAACTTTAGTATAAAATTAGTACA
AAGTTGAGTCATAAATTTAGTATAAAATTGAGTTACTTATTTTAAAACGGAGGGAGTAGT
TCTTTAGATATTGGTCACCATTCATGTCTAAGTGTTCCCCATGATCCCCTAGCTATTTTC
TAAAAACCTTGATACTATCTAATAAAGTCTGGTTTACCGCTCAAAAGAAAAAGGTTCAAA
GTTGATAGTAGAAAAAATGCATGTTCGCCGGAATGACCTTGTGGTCGGGCTCCACTATCA
TTCCCATAACGAAAGAAACAATAGCATAGTCCAATGATTTTATGCGCCGGAAAGGCAGAA
ACATGGTACTTTCATCCAAAGTTGATAGTAAAATCAAGGACAAACTTGCTGACACCTACA
CTACACTGTGGAATTTTCTTTTAGTTGCAACTAAGTTAGACAATCCTACTATAAAAACTA
TGTTATGTTTTTTCATAGATTTATGCACTGCACAATCTCTACCAAGAAATTTAATTATAC
TGAAATATAAACAAAGTATGAAATACATCTAAGTGCGAGGCTCCTCTATTAAATAGTTCG
TGCAATGTGCAATTCCCAAAAAGAAAAACTAATGCAACGTGCACCCATTCACCCTTGCAT
AGCGAATATAAGCTGCACTCAAGAGAAGGAGTAAACCGGTGTTGATTAATTGGTCAATTG
GTGATTTGGATGACCGATCAAGGAGGAGACTGCCTATGCCTTTGTACACATATAATGGAT
CAGTGTTTTTTTCTAGAACAAACTATTTGATCAAGTGACAAATGTGTTTTATTGCTTGAT
GGCCTCATCTGTTTGCCGAGGTCACCCCAGCCCACTAAAATGAATTGGCCTTTTTATGAA
AGATATTAGAAGAAGCGGAACATATATATACGTGTGTGTGCGTGTGTGTCTGGATAGATG
GGTTTCTCTGGTCTTGTTTCATTCTAGAAGAACAGAGCTTCGTAGAAGAAACAACAGAGG
ACAACATAAACAAAAAGGGTGGAAGGAGGTAGGGCAGACGAAATGAGGAAGCAGAACACG
AAACACTAGTGTTTTCATAGATTGAAAAGGATATAGGACGTCTTAAAATGACCATGTGGC
AGGCATGGTGAGTCATCTTGAAATCACTAAAATTAAATCATTTGGAATGTATGTATTTTT
CGCGGGGTCCATGTCATATGTTTTTGTGTGTGTAGGTAATTCACAAAAAACAGGAAAACC
AGCATTGAGAAAAGATATCTCGTTTTTTTTTTGTTTTTTTTTGCAAGACTTGGCTCTCGG
GAGCTCCTGTTCTGCGCCTTAAGGGCCCGAACAGGTAGCTGGCGCCCATGCAGCCGAGAC
TTGGGCTGGCCCAGCAACCTACATAAAAAAGTAAACCACCGACAAAAAAGTTAAAGTTTA
ATCGGGAAAAAATGTGATTCAAACTCCCAATGTCAAAGTGAACACAAACACATATTAACC
ACTAGGACACACTCGATTTGTTAATTAGTAGTGGAAACGGAGTTCTTTTGACCATTCATT
CAGCAATAGTATTATATACCCACGATAATTATTTGAATAAAGAAAACATAAATTTGAAAA
AAGCATTCCCAAAAGCCACGAATTGAAATAAATCAAATAATTTCAAAACGGTTTGTACCA
ACTGAAAAACAAATAGTAAAAAATGGAAAAAGTTCATCGAATATAAAAAATCATCAAATT
GTAAAAACATTCATCAAATTTAAAAAAGTTCATCAACTTTGAAAAAGTTCACAAATTTGA
AGAACAATTTCACTCATTTATAGAGAAAAAAGGAAAATTTAATGAAAACCGTTTCAAGAA
ACTAGAAAAAAGAAAAAAAAACAGAACAAAACCGTTCCCAAAAAAATGAACGAAAAAATA
ATAAGAAAAAAGACAGGTAGTGGAAGGCTAGAAGTAACACCAATGGGACATGGCTGAGTT
GGTTAGTGCAGTGTTCTGGTAGCTAGGAATTCACGGTTCGAATTGTGTGCACCCATTTTT
CTTTTTTGCGCTTTATACGAAAACAAGAAAAAAGGAAGAACAATTGCCGAGCCCAGCTAA
CGCTGTTGTAGGCCCGGTCAGCAGAAACAAAAATAACCGGCGCCTGCAGCGCCAAATAGG
GATTGCCAAGGCTCTTGTTGTTCCTGCCGGTGAAACTCATTGTCCTTTGGTTGGGCTCAA
AGTGGGTGGGCTACATGTCTGAAGCCTGGGTCCGTCTGTCATTCAGCGGTCCATAATTAC
GCTCATCATATCTCTTGCACTGCGTTCGGATGTCTGAATTAGACCCATCGAATTGGATAT
GGTATTGGCTACCTGCCAATTCAGGCATTTGGATGTATACCAGATCGAGGGAAAGAGAAC
GGGCCTAATACAGAGCCAAAAGTTTTTCCACGCGTGCAACCTTTCCACGATACGAAGCTC
TTTGCCTCCGATTTGGCTTGAATTGACCTAGTCCCGTGAAACAAAACATTTGAGAGCGAG
CTGCCCCTTTCCTTCTCGTACGAGTAGCGTGTGAAGCTTTAGGAGCCAGCACCGGCATCA
GTATGGATCCCCACACCATGGCCTTCCTCCCCCTCCTCTCTCTGGTGGCGACGGTTCTTC
AAACCCCCACGACTGTCGCCACTTCCCCTCCCCTACAACTCTCCTTCCTCTGCCTCGTGA
GCCGGCGCGGCCCCTGGTTAGCTGGTTTGAGGATTGAGTCGGTGGAGCATCAGATTTGAG
AGTGGTTTTGTCAGCTTTGACTGCTACAATTTCAGAACAGGATAGTTTTGGTAGACAAAC
ACTTTGGGTAGGCAAACAGTGTCCGATTGAGGTGAAATTTTGAGGGGATCTCAGGAACTC
GTGTGTCTACTTGTCTGCCAAATTGTTTGGTTCAACGGTTTAAGCGCAGTTTACAAAATA
CTGAAGGGGACAAAAGTTGTGTGTACTCTGCTTTGCTGAAATCTTGCCTCTTGTGGTTGT
TGTTGTTGTTGCCATTTGATAATGTGGAGAGTGTGTTGTAAATCTCCCTAGAGGTTGTAG
GGAAGACTTTGTACTGATCATTCTCATACTGAAGTTGTGTGTACCGGTTGGTCCACGGTC
GTGGTTTTTTATCCCTCAACTTGAGGAGGTCTTTTCACGTTAAATCATGTGTCACATGTG
CATGTTGTTTGTGTTATTCCATTGTTTACTTGTTGGTTGAAGTTGTCCTCAAAGTTCATC
ACAACTGAAGGGGGCTATGTAGTGTGCATATTTGCCATATAGGTGAACTTGTGCAGCTCA
TTGTTATTGTCCACCCCCAATAGGCCTTTCTTGTATTCAATTTATCTCATCATGCTTACA
CGAGTGAATTACAGAAAACAACCACATTAAAGCGCAGGGTTGCAGAAAACACTCTTCGTC
AAATTTAAGGTAGAAAACACTGATTTTGGGCTTGATCATTTGCAGAAACTACTGACCCGT
CTATTTGGTCATTTTAAGCTTGATTATAACAGGTGGGTCAGTTGTTTCTCCACATGATTA
AGCCCAAAATCAGTTCTTTCTGCAAAGATTAAGCCCAAAACAGGGCCCCATCTGTCATAA
TTGAGCTTAAAATGGCCAAACAAACGGGTTAGTGATTTTGCAAATGATTAAGCCCAAAAT
CAGTGTTTTCTGCCACAAAATTGTAGAAGACTGTTTCCTATAACCCTACGTTTTGATGTG
ATTGTTTTTTGCAATTCACTCTGCTTAAACAGAGAAGAGGGAATTGAACAAGTAAAGCAA
CAGAATGCTGATTAAGTGCACTAGAATACCGGTGCAGAGCCTGTTACAATGTGCTTTAAC
CTTAGTTCTAAGTCCTAACCAACTGATCTCAATCATTGTTTTAGTAATTAGCTGTGAAGT
TTTGACAAAAAAATAGAAACCTACGGTGATAGTTGTGATTTCTTCATTTTTGGGGGCTAT
ATGTTGATGTGATTCCGCTGACTACTGGGTATGCACCGCAGCATACCCTACGAGCTTGCG
AGGAAAATAACTGAATGATGTTTGGTTTCGTTTCTATAAAATGGAATTGGGGCGGGTACC
CATTTCCATTGAAAAAACTGGATTAATTTTTTATTTTGGATGCTCGAGCAAATAGTAAGT
GGTGGAATGTTACAGATGACGAGTGGTTGATTTTCGCTGCACCAATGTGGCTCCTTAATA
TGGAGCTGTTATAAACTGAACCCCTTTGGAACCATTGGTGCATCTTTTATTTGTTTCTAT
GTGTTTTTCTCGAGCACAATATAGTTGTCGTGTATGCACAAATTTTTTCGTCTCACCAAA
AACATTTGTTATAGTGAAAGAAGCGAGTGGTACTGGTGTAGAAGACAGTACATAAGCATA
GCAGACGGCGAGCAAGTTTAATTTGTTGTTTTCCCCAAAACATGTCACAAATTCATCATA
TGCACCTGATCAAGTGATCTTTGGCCAATCTAAACGATGAAATTGCCTTCGCCCGTCCGC
CGGTATATTCCACCACTTCCTTCTCGTTGGGCAGTGTAGAAATTCAGTTTTTTCATGTCA
GCGACCACCGAGACAAAACCACATAATATCTTGTAATCAACAGAATAACAGTCTGCTCTA
CTAATAACAAGTTCTCAAAAGGAAAAAGTTGCATCCATGCTGTGGATTTGATTTTCTAGT
AAACACCAAATTTCTTACTTCATTGATTTATTCCCTTGTACCGTATCAACTGAAACATCC
GATCTATCTTTCACGTCTTCGACAAAAAATCACGAAAACAGATCATTTCGTTGGGTGACG
TTTCCTTTAGAGGAAGCGCCATGCCGGTGACATGGAGACCAATTAATTCCTCACGAGTTC
CTTATCTCCTCTGCCCAGCCAGAGCAATTGTGCATCTTGTTCCATGTTCATGTCGTCATG
TCTACAGGTAGGGACGAACTAAAAACCCTGTCCTTCGCCTTGAGAGCCTGCAGAGGAGAA
ATGGAAGACGATGACGAGCCACACACACTAACAACTCGAGAGACTGAGAAGCCGACGCGC
GGCAGAAGTTTTGGCTTGATTTGCATGCCTACCTCTTTATCCCAGTTGGTGCGCATGGTA
ATGGCCAGCAGCAATAGCATCTGCACGACTAGCCCGCAGATTATTCCGAACCACAGCCCC
TGAAGTTCACACCCATACATAGGTTTTGAGAGGTTTCTTCAGATGAGGATGAAATACAAG
ATTACAAGTGAAACTGGAACTTTCTGTATGGTTCAATGGGTGGTAAAATCAGTACCATTC
CGTCAAGGTGGAAGACGAAGGCAAAGCATAGCGCCGCTGGAATGCCGACAAGGTAGTATG
CGCTGAGATTGACACAAGCACCAATCCTTTGCAAGCCACAGCCCCTAACAATACCTGGAA
TATATCAAGCATATACCCCGTGCTGCAATCAGTATCTTGAGAGTAATGTTCACCGAGATG
CTACATAACACTCACCAGTGACAAGATAGACTGGAGTCTGGAGCTAAAATTCGGGAAATG
GTCTGCAAGTGCATACTTGGAAATTGGAATTCACGGTATTTGGTGCATCGTCTGTATTTA
CCTGAAAGGACACATTGCAGATCGTCGAAAATGATCGACACGGAAAGAAGCGGCATCATT
CTCGCAATGTATTCCACCACCTCCTTCTCGTTGCTGTACGCATACCCCCACAGATTGCGC
ACCGAGAGCATAATAAGTCCTAACGACACACCCGACACGAGACCCAGAACCATGGTCACA
CGGGTAGCCAGACGGGCAGCTTCAGGCCGCCCAGCACCAAGCTCGTTTGAAACACGCGTG
CTACCATGACAAGATACACGGTTTCATTGCCACAACGACTGTACGACAAAGTTGTAGTGC
ACTAGAGGCATGTGGCAAAAGGTTTACGAGTATTGAGTTGTTCGGTCGTACCTTATGGCT
GCCCCAAGCCCGAAGGGGATCATGAATGTTAATGCAGTTGTGTTTAAGCTGCAGGAAGTT
CCACATTTCTCATCAGAACATGTCATACACAAATGTGAAATAATCCATGGAAATTGCAAC
TCACCAAATGGACAACACCGATGCCTCGAGCTTAGGATTTGCGAGAAGCCCGGAGAGAAG
TACCAGCAGCTCAAACGACCACCACTCTAAGCTGTGTACATGTAGGATCAGATGCAATCC
GATCGAGATGGAATGCGATAAAAAAAATATAACTGCAAAAACTGAAACTCACCAAACCAT
GAGCGCGGATGGCACGGCAAGCTTCATGAAGCTGACGATGTCGCGGAACGCCTCCTTTGA
GAGCCCTGTCCAGGTGCTCTTGCAGGATGGAGAGACCCTGATGTAGAGAGCCAAGATCGA
TACATTGGTCAGGTACGAGATGCCGTTGGCCAGGGCAGCGCCCTTGTTGCCCAGCCCAAT
CTTGTAGACCAGCAACCAGCACACGAGAACGTGGCCGAGCGCCGTGACGCCCGAGCTCGC
CATTGCCGGGAGGACGATGTTCTGCGTCTGGAGGAACCGGACGTGGCACTGCAGCAGCGC
GTAAGCGAAGAGCGACGGGATCATCCACCGGATGTAGCTCCCTGCCCCCATGGCGATCTC
CGGGTCCTGGCCCAAGAGCAGGAGGATCTGCCCGGTGAACGCCCAGAGCACCGCAACCAC
GACGCTCACCAGAGTGAGCACAAGGATCGCCCTCTGCTTGTAGATGCCGAGCAGATGGGG
CCGTTTTGCCCCGAAGGCTTGCCCACACAGCGTGTCCAAGCTGCTCGCCATGCCAGACTG
AGATGATCATTATGAACGAACACAAGAACGGAAAACCATTCAGGTTGATGTCAGTGGTTC
ATCCATGAGGATCAAAACACGTAGGGAGATGAATGGGCATACCATCAAGCTGAAGCCGGT
GACATTCGCGAAGGATGTGGCGATGGAGGCGCTGGAGAGGGCGAGCTCGCCGAGATGGCC
GACGTACATGACCGAGATCATCTGCACGACGTTCTGCAGCAGGCATCCGGCGATGAGAGG
CCCGGCGAGGTACAGCTGCTTCTTCACCTCGGTCACCACCAGGCTCTCCTTTGGCCCTCC
TGTCTCCTCGGCGCCGCTGTCGCCCCCAACAAAGGGCTCCACCATGGCCGGCAACATGAT
TGAAACTTGCAATCTCACGATCTGGTTTCTGAAGAAGGTGGGTGAGGTGAGGGTGGTGTA
TTTATCACGTCTGTGAAACGATATGCTACCCCTCCGTCCGGGTGTACAGGGCATGTGCGT
AGTTCTAGATCGTTAATTTAACTACTTAAATATATATTATATGTAATAAATAATATAACA
TTAGATTCATGCGGGGATGTAGTTTTTGAATATGTAATTCTTATCGCATATAATACTCCC
TCCGTCCCAAAATTCTTGTCTTAGCTTTGTCTAAAAATGGATGTATATAAGTACTAAATT
TGACTAGATACATTCGTATCTAAACAAATATCAGACAAGAATTTTGAAACGGAGGGAATA
TATGTTTAGCTAGTTAAATTGGCTACCTAAAATTACAAGTATCCCTATACACTTGAACGG
AGGCAGTGCTAATCAACCTCATGAATGCTGCATAAGCCCGCCAGTGAAGGTGAAATTCAG
TATGGAAACCAAGAGGAAAGAGTGGCAGCCAAGCTGAACTGGGCGTGACCCTGAACCAGT
CATTTTCAGGGTGCCTAGGTAATGGAGTAAAGAATCTCATGCGTGACAAACGCGGCAGCT
TGGCAGCCAAGCTCAAGATATCTGACATAATAAACTATCTGACGAGCAAGATTGAGTGTA
ACTGTTAACAGCACATGCCGGATCATGCCCGGAGCTGGAGCCTATTATAGTCAAAATTGG
AAAGCTACAAGCGTAGATGATTGCACTGGTATAGTAAAGAGTTGGAAAGCTACAAGATTA
GATGATCTCATCATCTCATATAGGTAACGAACTCAATCACGGCCGGAGCCGGCCGCTCTC
GTTGTCATGTGTCATATCTGATGAAGCATACATGAATGGAAATTTCTTACTCCCTCCTGT
CCTAAATATAATTTTTTTAGATACTCTCCATGTTTTAAAATTCTTATCTTAAATTTGTTT
AGATATAAATGTATCTAATCATGTTATAATATTTAGATACATTCATTTCTACACAAATCT
AAAACAAGAATTTTGGGACGGAGGGAGTATTTCACTACGGACTCCTCCGTACGAAACAAA
ATAAGATGAATCTACATTCTAAACTATGCACAAGTGGAAAACTTGCCTTTGGCCTGGACC
CTTTAGTCCCGGCCTGCCTCTGGGCCCGGGCCAAAGGCCCC