morexGenes - Barley RNA-seq Database

Contig contig_59357

Source Contig contig_59357

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_59357 (2193 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_59357

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_71209	2	2141 bp	AK248520.1	Available	Available	None

CDS Structure of MLOC_71209

Contig Sequence (2193 bp)

>contig_59357 2193 assembly3_WGSMorex_rbca.fasta
CATAACTGAGATTCTACTTGGGGGTACGTATATCTAAATAAATAACAAACACGATGCAGT
GCACATCAACGTCGAATGATTCTAGTGAAATATGCTTCGCCGATTAAATTCCTACAGGAA
TCAATAAATATGGCAGCTGGCTACCACACTATGAGGTTCCTCTAGTCAAGACAAGTGCTT
GAGAGATAGTAGTGTACGTGTTTCTGCCAGCGAACAGGCCATGCATGTCTCCATCTTAAA
TATTGAGGCTCAGGCACCCACATGCCAGAATTTAATCCTATGGCAGCTTACTTATTGACC
ATCGCTCACTACTGTCCCATACAGTGGCCGGTGGACCAACGTCGGGTTAGGCGCTCACCA
CTTTTCTTTTAGTACTTCCTCCGTTTTTCTGCTTGTATTGTATATAAGTTTTGTCCAGAA
TCAAAACATGTATGAATTTCGTAAAATTATTGATAAATGTATCAGCATTCACAATGCCAA
AACAATATTATTTGATTCATTATAAACATAACATATAGTTGCATATTACATAAATTTAAT
AAAATGTGAAAAAGAAAACACTTGAAACCAGGGGAAAACGCAACTCGATCAGGAGACAGG
CTGCCCACCATATCGGCGCAGCAAAGGGACCAAATCGAGAGCCCATGCCCATAAATACGA
CCGTGCATGCATCATGGTCCATTGCATGGCTAGAGATCCACAGCGTGTACCGGGGGCCCT
AGCTTGTTAATGGCGCGCAGCTACGTTTGGGCCCTAGTTAATGCAGCGCAGCGTAGTACG
TGTACTGACGTGCCAACGTTGATGATTGTTTTCTGTGGTGTCGCAGGTACACCGGAACAC
GTACGCGCTGGTGGTGAGCACGGAGAACATCACCCTCAACGCCTACATGGGCAACAACCG
ACCCATGCTGGTGACCAACACGCTCTTCCGCGTCGGCGGCGCCGCCATCCTCCTCACCAA
CCGGGCCGGCGACCGGGCGCGCTCCAAGTACCAGCTCATCCACACGGTGCGCACCCACCG
GGGAGCGCACGACCAGAGCTACGGCTGCGTGACCCAGGAGGAGGACGAGGTGGGCGAGGT
CGGGGTCGCCCTCTCCAAGGAGCTCATGGTGGTCGCTGGCGAGGCCCTCAAGACCAACAT
CACCACGCTCGGCCCGCTCGTCCTCCCCATGTCCGAGCAGCTCCGCTTCCTCGCCACCGT
CGTGCTCAAGAAGGTCTTCCGCGCCCAGGTCAAGGCGTACCTCCCCGACTTCAAGCTCGC
GCTCGACCACTTCTGCATCCACGCCGGCGGCAGGGGCGTCCTCGACGAGCTCGAGAACAG
CCTCAAGCTCACCCCCTGGCACATGGAGCCCTCCCGGATGACGCTCTACAGGTTCGGCAA
CACCTCCAGCAGCTCCCTCTGGTACGAGCTCGCATACTGCGAGGCCAAGCGCCGGATCAA
GAAGGGAGACCGCGTCTGGCAGATCGCATTCGGCTCAGGCTTCAAATGCAACAGCGCCGT
CTGGAGGGCGCTGCGTACCGTCGACGACGCCGGCGAGAACCCGTGGATGCAGGACCTCCA
CCTGCTCCCCGTCGACGTGCCCAAGGTGGTGCCCATCGACGAGACCTCTTACCAAGTCCC
AATAATCTAGCTCTAGCTCTAGCTTGCTAGCTAGCTACCTCTGGCTTTCCGTCGTCAGTC
CAGCATTATCACCAATTCTCATCAGGCTTATTTAATTTATTTTAATTAGGCGGTCGAGGG
TTTTTACTCTATGTTTTGATTAATAACTTCTTTTTATCATGTACGTAAATCTCAATGAAC
TAGCAACAAATCCCAATCGATTTATCTACATGCATTAATTAGTGTTGCCGTGGAGATCAA
ATACTCCATTTTTTTTTATAAGTCATCTTACGAAACCAAATAATCCTAAAACTCTTAGGT
ACGGTGCATTAACTTTCACCTTATTTCTTATTTTTTAACATAAATAAAGGAATCAACCAA
TAAGAGATGTATGAGTGTATGTTTTTAATGACTTAAGACTAACCATCACGACATGCGGTG
GTGGTCAATTCATCGAATGCAATGATATTAATTAGTACCAGCAAATTAACATTAATTTCT
TTCGTTTTCCTCTTCGTCAAGGTAATTAATTAATTAGTGTTGGTCAATTCACACTAGTGG
AAAACGGGCTGCCTCTGGGCCGGGACTAAAGGC