Map Locations of contig_59309 (8985 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_59309

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71181 3 1836 bp AK364023 Available Available None





CDS Structure of MLOC_71181






Contig Sequence (8985 bp)

>contig_59309 8985 assembly3_WGSMorex_rbca.fasta
AGGGTTCTACTAGAGATGCTCTTACACACTAACACTTTCTCTCTCCTATCATTTGGGTGC
AACACACACTCTCTCCTTCATTTCAATTCTTGGTAACTTGAACAACGGAGTAAGCACTCG
GTGACACTGTTTTGCTCGTGTCCCGGCATGCTCACATGGCTACAGTGACGAGCCTGCTAA
AGTGGTCGGCTGTAGAGGCACCCTACACCTTACAAGATGCACTGTGCCTAGATTCTAGTG
CTAGGGAATTATTCTGAGTGAAACCTCCGAAAAAATGTCTCAGCGCTGTCAATGCTCAGA
CCGAAGCACGAATCTCATGTGCGCTGGACGGACATGATAAAGGGGTGTCAGGACTCCCAG
AGCTATCACACCTTTTCCAAACACAGTAAGTGCACAAGTAAGATAAGAGATGCTGATAGA
TTTCCAACCAAAGTCAAACAGAGCCTTACCGTAGACTTTAGACAATTCCAGTCATCAACA
AGAGGCTCACCAGCTGGGCGAACAGACTTGAGAACCATTGGACCATCGGCAGAACCAAAC
AGAAGGTTTCCAATCAATTCCACGCTATTGTCAACATGAGATCTGTGACCCATCATCTCG
AGCAATTGCTTCCGAGCATTGTTCTTCTCAGGGGAGCTCTCAGCCAATTTCCGGTACTAC
ATGCAGAACAAATAAATCAATCAATGAATTAGTTTATCCATCCTTTTTACCGAGTTTATT
TATGCATATTCTACTATTGTGGGTAAAAGCATGGCAATGATCAACAGACCATGTGGCAAT
AAATCAGCAAGAGAGATTTCTCATGATATAATTAGGAACCATACCTTGTGCCAAAAATAA
ACAAGATCAGCGTCCCTCTGATTAACAGCTCTTGAGAAGGATGGCAGTGAGTTCTCTTCA
ACAAAAGTAGCGTTGTCGTTAGCAGGATTTGACCCGATGTACAAGAAGAGATGTTGAGCA
TTCAGGTCCAAAGAACCATATTGCATCACATGGGAACCGTAGCTGTATGAGTCCTGAGCC
GCCGTTCTCTTTTTCACCTGCTCAGCCGTTAACTAGTTATGTTCGCAAAGAACTGCTCCG
AAATTTATTCATTTGAAGCGCATGTTTTACGGAAATTTTCATTTTTTTACAAAGTTAATA
ATTTACAGGAAGAAAAACAAAAGGACAGTAAAAGAAAGATATTTGAGTATTAAGCACTTA
CCAGGTTATATTGCTCCTTGAGAGATTCGGTTCTCAGGTTGTGGACATCACTGTCAAGAT
TGAAAGTTGCACATTATTTTTTATTTTATTTTTCGAGAATTGAAAGTTGCGCGTTATTTG
AGCACAACTAAAACGGCTGAGAACCATAACAAAAAAAAAAGGTTCCTTCCAAACAAATGA
CTCGGGGCTTTTGACTCGGAATGCAACAATTATTACCATGGCTTCAGTCTGCAGAGGACA
GGAGAAGACATAGGGAGCATATACTCCCTAGAGCCAAAATCAATCTCCGGCATTGTAGTG
AGATTTCATAAGAATATGGTTGTGTGCAACAGCTAGCTACAGGTATTGCATTGACAGCGA
AAGTAGCCCCCAAAGCTCCATGGCCATCAGATTTTCCCTGCAATCGTTGTTTGCTACCTA
CAGGCTGTAGCTCAGCAGAAGAACGAACTCACGGCATACTATATCAGGTAGCGCCGTCCT
AGTTACTCCCATCGTTCCATAATATAAAAGCGTTTTTACACTACTCTAGTGTGTCAAAAA
CATGAGTAGGAAGTACGAGTAAAATCATTTTGATATTTGTTTGCGCAAAAAAAACATTTT
TATAAAGCACACCTGTATGATACCGTACCAGAAAGTACGAACTGATATGAGTGCCACATG
ATTCTAGCAAATGAATGGACAACAAAGCAGGATACCTGTCTTCCATCCAAGAAATGCTGT
ATAGGTCGCCCAAGCAAGTGTCATATTCCGGCGGAGGGCTCGGGTACTCGCCAGGGCAAT
ACGCTCCCCAACTGCTCTCCTCTGCGTTTGATGCGGTGGTTGCGTAGACACCAATGTCGT
TCGGCAGAAGCCCCTCAAAGACACTCCCGGCTTCACAGGCTTCAAGGTAAAATACCTGCA
AAATAAGAGTCCAGCCATTGCTTCAAGCAGCGAGTAAACATGAAGACAGAGCAAAAATAA
CCAGAGGATGATGCATGGGGGTACCAGGCTTTTGTAGGTTCCAGCAGCGTGCTTTTTCTT
CAGGACGTCTACAAGATCGTCACCGTAAATGTATGGATAGGTAGGCATCCCTGAAAGTTT
TACCACAAAAAAGAAACATGATTGTGCATGTCTACATTTGTATGTATGTATGTACGTATG
TATGTATAATGTCTGTTCTGACTGGCTTTGGATATTAAAATTCTCGAAAGAGGACAATAA
AATAATGGCAGGTTCTGAATACTGACCAATGACCCCAGGACCCCCATGGTCACTATAAAA
CACAAAAATGTGATCATTAGGGCCACTGTCCACGACTTTGCCGCTCCCACCACTCACAGC
GGTTTTATTACCGAGCAGGACAGCAAACAGGTTCTTGGCATTAACCTCCTTCCCAGTGTA
GTCCTACAGTGCAGATTCAGTCAAACAAACGGAAAATTGTGGATACAGGATAGGGATGCA
TGATCACTGGAATACATTAGTTCATTCCATCAAGATGTTGACATTATCACATAGGAATTT
GACATCCAAGATCAACTGGAAAATGGCATAAAGACTGATCAAAATTTAGGCATTCAATCA
TTTTCAATGAGGTACAAAATGCCATTGAAATCTCTGTTCGGGTAATTTCTAGAATATCGT
ATTCACATTTTTTGTGCAACCATTAAATAGTTTGTATCATCTAGTATGTTAATCTACCAA
TCTTTAGATTTTTACTACATCAACAACTACTGGAAAATTCCCCTCCAACATGCAGGCATG
ATTACCTTAGGGACCCCAGCATAGACATCTCCACCCTGAGGGTGGTTGATGATGACGCCT
GGCCTTGGGTTCTCCGGGTTGTGCGCAATGTCGTCGTACATGAAGACAATGATGTTCTCA
TCCTTGAGACCACCCTTCTTAATGATCTGGTAGGCGTGGCAGACATCTGCCTGCAAAGTG
CCAAGTTCCGGTCCACAAATTAAACGCAACACTCGATTGTCACCAACCAAACTAATCACG
AAGAAAAAATATTAGAATACTGCCTCCGTCTGAGTTTATTGTTCCTATTTTGTGTCAAAT
TTTAACTGTAGATTTGACCGATAAATATAATTTTTATGTCACAAAAATTATATTGCTGTA
TTCATATTCGAAACAGGTTTTCAACCATACTAGTTTTATGCTATATAACTTATTCTTTGA
TATTTTCTAAATTAAGTGTCAAAAGTTTGACCCGAAATACGAAAGGGACTAATAAACCAC
ACTAGGTGATTGTAGATAATTTGTGCAATTCTACACAAGATTGATGTAAAAAAAGCACAA
TGATTTGGCACTCAGGCAAACTTTCCTTCCCTTCAATGATTAACTCTTTTTTTTAAAACT
GAGGCAAAGATTTGCCTCTTCCTTAATCTTTTGCCTCGGTTTAAAAAAATAGAGAATTCA
TAAAGCATTACACGGGCCACAACGTAGCATGAAAAGATACACCAGCACCAAAGAAAAGTA
GGATTACTCTCGCAACATGATGACAGTTAGATGCCTAGCCCCGGCAGGTAGTCCGGCCTC
GTCCTTTATGAGCTTGAGAATGTAGAAGCGAGGTGTGAACTTTTTTCTGAACACTCTAGC
ATTTCTCTCATTTCAAACAACCCAACAGACAAGCATAGTAAAGAAAGCCATGGCCTTCCG
GTGCGCGGTATTGACCTTCGACATATTGGTCCATCAACTTTTTGTGCTCTACCAACAGAC
AAGCATGATTAACTCTCAATAACGATAATATTGAAACACTTTGGCCATGCGCGCATATAA
CTCAGTAAGAAAAGGTTCACAGTTTATTTAGCTCCATTTATGTATTTTGTCTACCCACTG
ATTGACGGGGCCCACAAGGGTAGAGAATTTTTAGCGTAGCTGCTTTTATCTATTTCTTCT
ACCTACATACAGGCATGGTGCATGGTCCACACGCACATATATACAGAGAGCTGCTAGCTG
ACGTGTGTGGACTGTTTGGTCTGCCAACTGAGTGGCACATACATGACCGTGATCATATAT
ATTTAGTGACCGTAACGAGCGGTATTCTGAAGTATCAAGACCCTACCATAGTGTGCTTAT
CGGGTGTCTAGCTAGTATCATGACCGTGATCACCAGGTGCTTTCCCAGGAAAGGAAGGAA
TTAGGCGACAGGAAGGAAAGAGAGAGTAGAGGAGCTGGTGCGCACCTGGTGGCGGTAGTT
CTGGTAGCCGTTGGAGCCGGCGACGAGGACGGCCCACTTGGTCCCGACGGACCCATCGTC
CTCCTGCCGGCCGGCCGCGGCGCGCTGCGACGGCAGCCGGAGCCCGGGCTCCAGCCGCGG
GGTCCCGGCGTTCGCCACAACGAGCAGGAGGAGCAGCAGGGATAGCGGAAGGAGGCGGAG
GAACGCAATCGCCATGGATGGTGCTTGGGGTTCTGAACTCCAGAATATATATATAAGCGA
AAGAAACTTCTCCTTTTATGTACGTATATGCGCCGGCGCCGGCGGCGGCTGCCGCATGGG
ATATAGAAAGAATTCGGGCAAAGGGAAAGGTTACCACCCACCACAAATGATGATTTCGTT
CCGCTGCCCTGTCCGTGTCGGACGCAGCACGGCCGTCCATGGCCGATTGGCTGCTCGCCG
ACCTGCTACGTGCCTGTGGGGTGTCCTCTTGTGCTCCTCGGAGAAATATGAGCCGTCGAT
TCCAAGCTCTAGCATTTGGTTTGTTGTCTGCTAGCTGGCGCGTACGTCCGGCTATGGAAC
CTCTCTCGGCCGTTCACGTCACCATCACCAGCGTACTAGTAGTACTAGTTCCTGATTTAA
CTGAGGCCAGGGCGCCTAGTGCTAACTGCTAACTCTGCTATGGGGTGTCTGTTTCCACAG
ACTGGAGAAACTTTTAGAGACTAAAATAAGATAATTGGGACTAAAGGAAGAAGTCCATAT
GGAAGAGTCTTTTTGAGACTTTTTGACACTTTTTCCAACGCTATCCCTACTTTTAGCATG
TTATTTAATAACTTCTAGTACATTACTAGGGGTAACATGGTCTTTTTACATGTCATTTAA
TGACCTCTAGTCTATATTTAGTCCATAGAAACAAACAGATAGGAACTATGAACCTTTTAG
TTGAGACTAAAAAAAAGTCCTGAAACTTCTGAAACAAACAGGGCCTATGTCGTGTCGCGT
CAAGATTGTTGCACATTAATTTACTCCCTGGAAGGTACTAGACACGTGGGGCGGCTTGTC
TCACGCCACCTGATGTACACATGTATAATCATTTTGCAAAGAGAAAAAAATGCTTTTACC
ACTTAATTTTACATGAAGTTGGTATGCAGTAATTTATCTTTTTTTGCTCGACATTTAGTC
CCCCCATGTCGCAAAACCAGATGCGTTCTGTCCTTTCTCTCTCGTACAACATCAAAATAA
CAATCAAATAACATTAACGTGAAGGGCAACCGGGCCACATCGTCTAGGCGACACCATGAG
AAGCCATGAGTCCCACATATGTCAGTTAACGGTCAAATAGTAGTCAAATAAAAAAGCTCA
TATTTGGTCTCACGTGTCAGTTAACAGTCAAATAAATAGTCAACAGATGGTTTAGTTAGG
AGCGTGCCCCACCTGTCATAATCCGGATCAATTTTAAACAACCTGGTCACTTGTTTTTTT
TTGGAACAATCAATCAATTTTGTGATAGCATTTAAAAAAATTCAGAAAATATGTAGTTTT
TTATAACCCTAAAGCGCAATGTGGTAGTTTTTTGCTATTTATTTCTATGGACTCTGTGTC
TTCCGGCCACACACAAAAGTGGTCGTGGCAGAAAGCGGAAGGGAGGCCACATGTGCGGTG
TCACCGGTGGGTGCCTCGTGAAGTCCTCCAGCGACGTTGGCATGCTGGGCAAGTACACAC
AAGGTGGTAGAGAAGATGCCGTCGTTGTATGAGAGAGAGGAGGGAAAAGGAAATAGAAAA
CCAGTGACACGTCAACGGTTTTCTCACATTTCTGGTTTTGGATAAAGTTTATATAGTTTT
GAGACTGAAGGGACTAAATGTCCACCACAAAAAGGCGAATTACTAGATACTGACTTCTTG
TAAACTTAAGGGACCAAAAACATAGTTTTCCCATTTTAAATCATCTAATTAGTTCATCGC
TATAAGGTACATTGCAAAAAGAAAATGCAGCAAAACTTCAAAACGTTATGCCAATTTTGA
GCAAAGGGTCCTAAAGTAAATGGCGGAGAGAAAAGCAATCTGGAAGTAATAATTTGACAT
GTAAGAAAGAAGACGCGCCAACCGAAACAATCAAAGTAGAGATCATAATAAACATTGCTT
AAAATGCCGATAACAACATTTCGTTGTCGATGAGTTAACAGGCTCCAACGAAATTACAAT
TTACTAATTAACCATGGGAAGCATCAATGTCAAGTCTGCCTTCTAACCATCAAACCTTGA
TTTGCGCAATGGATATTATCTTGACGTGATAACAAAGGAGCCCCCTTTTTTGGCATGATC
AAAAGAAGTTCCGATACACATTTTTTTAGAGAGTGCCTAGAACTCAGCTAGCTGAGATTT
TCTATGGTCTCATTCACATAATTTTATTATATTGTGTGTTTATTCTGTTTGTTTTCTTTA
GCTCATCATTTTATTTTTTTGGGCTGAAATATCATATTTTTGGTTGTTGTTGCTATGTGC
CCCATCTAGCCGGTCCAATAACTACTCGTTCGGTTCTTATTGTTGCACGTCATATTAAAA
AAAAAAAAAATCATTGATAGAGAAAAAAAGAATAAGAAAAAAATTATGTAATGGCTTGTT
AAATTCAACTACTCCGACCACTAAACATTCTTGTACAAAGTAGTGTGTCCTTATTATATG
AATTTATTTTTTTCTTAGTAAAAAACAACTTGATTCTAGCTTTTCCATGTAATTGCTGCA
CAAATAAGATTTGCAGTTGCGACCCGACTATGAATACTTGCAATTGCGACCCGACTATGA
ATACTTGCAATTATGATCCGACTATAAATACTTGCAATTGCGACCTAACTTCGAATACAT
GCAGTTGCCATCCGACTATGAATACTTGCAATTGCGACACGACTATGAATACTTGCAATT
GCGACCTAACTTCGAATACATGAAGTTGCCACCCCGACTATGAATACTTGCAATTGCGAC
ACGACTATGAATACTTGCAATTTCAACCCGACTATGAATACTTGCAATTGCAATCCGACT
ATGAATACTTGCAATTGCGACCTAACTTCGAATACATGCAGTTGCCACCCGACTATGAAT
ACTTGCAATCACGACATGACTATGAATACTTCCAGTTGCAACCTGACTTCGAATACATGC
AGTTGCACCCTACTTTGAAATACCTGCAGTTGCGGTCACATTTCAAATCTTATAGTTGCT
ATCCGACTATTAATATTATTGTCATCAATATAAAAATGGAAAACAAAAAGAAGACACCAA
ATCATTAAATAAAACAAGGACTAAAAAGTAAAAAAAAACACTACAAAGTAAAAATAAATA
AATAATGAAAGCCTAAATAAACAATTTTATAATATATGATAACAAATGAACATTAAGTTA
AATGAAATGAATACACTTATTTAGGAAAAGGTAAAGAGTGGAATAAATTTCTACTTAATA
GTGAATAAAAAAATAAAAATAGAAATTAATTAAGAAAACAACAATTAATCAGTAAAGAAA
CGTAATCAGCTCTGTAGACAAAAAGCAAAACAAAATTGGCTGTCTACAGAGCTGGTTATT
ATAGTTGCATTCATGCAGCTGATTACGTTTTTGTCTACAGTTAGAAACAGCTAGAAACAT
TTATGAATAGCAATTAAGAAAATAACAATTAATCAGTATAAAAAGTGACCAAGACTATAA
GTAAAACTCAGCTAGCTGAGTTACAGCTAAACCGTAAAAAAAAACTACAGAAAGTATGGA
TGTTCAAAACAGTGGAAAGGCAAGAGAAAAATAACTACCAAAAAGAAACATATCACCACA
CAAAAATGAGAAGTAAAAAGAAAAGAATGAAAAAGCCAAGCTACAACGTTCCTGCCTAAA
CAAACGACCAACAAGAAAACGAAAATTAAACGGGCCGCTGGCTGAGCAATAAATGGGCCA
CACCACACCACCAGAACTCTCACCAGCTCAAGAAAACGCGAATCACAACGCCACAAGATC
TGACGGCTCATCAAGTGAATGAGACCGTAATAAAACTCAGCTAGCTGAGTTTCAGCAAAG
CCGTTTTTTTTTTAAGAAACGGGTTTTCCCCAATTCCATCCAACTTTATTGACTGAAAAC
CACACGAACAATGTCAAGTATGAGCTCAAAGAGTAGCTCACCAGATAAATCAAAGCAGGG
TTTAGCCAGGACCAGATTGCTATATTTTTTTGTCACATCAAACACAAACAACAAAGAACT
AGCAGAACAACACCTATCCGCACCCTTGCACGCATCCATCAACCAATTAAACCAGTCGGT
GTTGGCAACCAGAGTCTAACACGGTTCTTCATCCGTTGAGTTCACTTCACTGGCAAGATC
AAGTGGATGCGATGCGGATCAGATCCCCTCGATGGTGGTCGAACAGTCTGATGCATCGAA
GCAAAATCATTTGTTGGCTGGGAATCCTTGCAGAGTATTTTCCACTAGTGTAGAAAATGG
CAAACCATGCACATGAAGCATTTGACACTTCACCAAGTGCGGCGTTGAAAAGAAAATTCA
TTCCACAAAGGACCATAAGCTCCATAAGGCCTTGTTTGGCAGGAAGGGGTTGGGGAGGAT
TGTGAAGAAGGAGGGGGGTGTTTCAGAGGATTGGGTGAATCCCTT