Contig Data
morexGenes
Links



Map Locations of contig_59289 (5041 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_59289

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71173 1 425 bp MLOC_71173.1 Available Available None





CDS Structure of MLOC_71173






Contig Sequence (5041 bp)

>contig_59289 5041 assembly3_WGSMorex_rbca.fasta
TTCTAGCTATTTAAGAATAAAAGATATCATGACAATTTGCACCCACACCGTAGATGCACT
ACACAATTAAAGCTTATAGTTAGGATCGGAGTTCTTTTAAAATGATATGGACCTACTTTG
TGATTTCAGTTTCTAAGAAATGTATTTATAAGTATATTTGAAGATTTACCATACAATATT
AATGAATCATAGTAAAAGGGAGAGTTTTACTTAAGAGTCCGTGGGAGAAATCTGCATGCT
TCCAAACGGATCTCTTTCTTAGGATGAACTCATGCTGTTTACTGAATCATGTCTCATTAA
GAAGTATCACACTGAATTAACTTGTCTAATGACTCAATAATTTCTACAATGGAGATTCAC
AAGATTGAATGAAGCTCGGGGAGGAGAGAAGATGCGCAAGGGGAGTGGTATATCGATCTT
ACCTGCTGCCCTGAAGGTGGCAGTGGCCGCGTTGGTCCAGCGGGGGCGTGCGGTGGTGTC
TGGAGTAGGTGGCGGCCGCGTTCGTCCTGCGGCGACCGTGGCGGGATTGGGAGGTGGCGG
CAATCGCATTGGTCTCGCGGTGACACGCGGCACGGTCGGGAGGTGGCAGCGGCCGTGCTT
GTCCAGCAGTGACGCATGGCAGGGTCGGGAGGTGGTGGCCACGGCAGCAGGCGAGAGAGC
GGGGCCAGGAGGGAGAGGAAGGTGAATACGATTTTTTTTTTAACTAGGAGGGCTGTTAAG
ATGGACTAGTGCTAGTGTGGGCTAATGGGCCAAGCCAGCACAATCTGTATTAAAAAAAGA
CAAAAAATAAGCACTTCCCTCTGTCGTGAGGTATAACCGCAACGCCAACAATAAGGTTGT
ATCATTGTCATACAAATTTGTCCAACGCCAGCACTGTCCGAAAAATATAGTGCTGGTGTC
GCTTAAACGACGCGTCACCAACATAACTTGTGGCTAGCCGTTTCTTCACTAGTGCACGTG
CAATGAGACCCGCGACGATGCCTTGAAGAAGGGAACAAGCTTCGTGTCCGCCGGTCCATC
AGAAGATAGAACATGTTTTCACCCTGGCTAACACTCACCTCCACCGAACTCCACACCCCC
TGCTATCGCTTAAGCCACACAACCATGGCCACCGGGCAACACTGAGCCACGGGCTCTGTC
CATGAGCACTGCACTACCACCACCAGGGCCATCGCCCTGTATCCAAGAACTTGACACCAC
CTCACCTGACACCCACCGCTACCCTAACCAACGAGACGAGCGGAAATGCCCCACCTTTCG
CACCCCAGGGTTGTCCTCAGCGCTGAGACCCAAGACGCCAGTCAAAATTGGTTTCCATCA
ACCCGCCCTGTAGCATCGGGCACGAGACAAGCTTGGTCCTGCCGCCGGGCAGAATTCGAT
CTCGGTCCTACAGCCGGGCACGAGATGAGCTCCGTCCAGCGGCACCGAGCGCGAGAAGAG
AGATGGACCATAGCTATGAGAGGACCGACCCTCTAACAAAAGTAGCGCCCGGAGGATGAG
TCAAAGGCCGACACAAGCCGTATATGGATGAGCCGACGCCAGAACATGCCAGCCGCAGCC
GTAACCGACTTGCCAAGCTGCCATGGAGCCATCCACGGGCGGAGCAGCAGCCACACCTGG
CCACTACCGAACCCGCGCCGCCTGCCGAGCTCCAAGCGTCGGAGCCGCCGGGCACGCTCA
TCCCTCCTCCAGATCTGGCGAGTCGGGCACCGGCTAATGCAGCCCCCAAGACCCAGCGCA
TGCCTGCACGCAGCCGACCACCTCCGTCTTAACACCAGCTCCTATGCATGTCGCCGCCAA
GTGCCGCCGCCGACGAAATGCCGCACGTTGCCAACAGCCGCCGCTAGCTCGCCAGATGTG
GCCGAGCCCAGACCAGGCCACCACCACAGCCACCGCGAGCCCGCCCCGTGAATCCCACCA
CACCGCCACTCGGATCCCACAAACCCACCGCGAGAGCCCATCGCCGTGCCACCGCACCCA
CCACTAGCGCGATGCATCGCCGAAAGCCATTGACCTGCACCAATCACCCCCGAGCACGGA
GTGAAGGAGCCCTGCCGCCACCGACTTTGGCGGGCTTTACCCGTCGGCGTGGCCCGGTGG
TGGCGAGGGAGGAAAGGGAGGAAGGGTTGCCGAGGCCGGCGGCTAGGGTTTCTCCCCCGG
TCGCCTCACGGGAGAGACGCGGGGGAGGGAGGCGGAGGAGACCTTAGTGCATGCATAGAT
GAAGCTTTTAAGTAATAAAGTGCCCCTTTTTGAAAAAAATATCAACTGAAGACTAGTACC
GACCAAATCCAGCGAGATTTGCTGAAGACACACCTCCGCACACATCCTCAAAGGACGCTA
GACGCATCATTAGAATGAAGGCTAGGCAGGAAGAACCTTATTTTTCATCTTTAAGGTGTC
GTCAATTTCAGTACTAACACAAATTAGGCAAGAATTGAATTTATACTACTATACTTCGGT
GCTAAGTATCACAGTAGTGTCTCGTCTGTATATGCGCTGAGATATCTCCATCCACTTAAT
GCATTTGGTAGCCTGCCTGGTATATCGACCTCTTGCTGGTCTATATATAGCACAAGGCTC
GGCTCAAGCCCACGAGTAGTATTCCGACATCCATCAAACATTCAAACATGATGTGCCACA
GATCCGAAAGCCAGATGAGAGGAAAGGCAGCACCGATCTTACTCCTCGCCATCCTTGTAT
GCCATGCGTTCTGGGCAAACGGTAAGTTCTATCTACGCAAGTGATCGATCCGTCGAAAGA
TTATCCATCAACTCTGCTAATATCCATCTTGTCCATTCCATCTAATCTTACGCAGCCATC
CGTCAACCAGATGACTGGCACGAGATACTGCGCAAGGAGTGTAAGCTGAGCGTGTGCCAT
GAAATCGGAGGACACAAGAGTTGCTTCTGCTGCTTGGCGACGCCCGACAGCCCTTGTTGG
TTCAAGGAGGACGAGTGCAAGAAAGCCTGCTCGCAGGTGCAGTTACCACCATCCTCCTCT
GGTGGCACCAATCAAATAGTGTCGTGAGATGTTTGGAACAACGACAATAAGAGATCACGT
CGCGTTTTTGTTCTAAATGAATCGGTCATCTAGTGTTGTATCTCCATCCAAAAAAAGGTG
CAAGGAATCGAGTCAAGAATGGAACTTCTCCCTGAATTTTAGCTGTGACCAAACTACAGC
TGTTTATTCGCAAAATTAAATTAATATCGCGCTAAACAATACCTGTATGATTTTGCAGCA
ATTAATACCGGATTTATTCCTTGCTGCGTTTTGATTCTTCCAGCTAATGCACAGTGCAAG
CCTGCAAGGGATAACCTGGCTAAGGGCACTTTCCAAATATACATGGACGGCAGCAATCGT
TCAATTTCTCCCTTTTTTGCGGGGAAAAAGAGAGCTTATAATAACTTAGGATGGGATGTC
GCTCATACACCACTTCACAGTCTCCTCCGCACCCGAGCCGAGCCACACCGCTGTACGCGG
CTGGTCCTTATTGAACAGTAAACTGCCGAGTTTGGAACTCCGTAATTTTTTTGCCAGGTT
CTCCCTGATAACCAACTCGATAGATAATTTGCACTGGAAAATGTGTGCTGGCACATGAAT
TATTTTTATGGGCAAGGTTTGCCAAGTTGAAATCTCGGTAAAGAAAGATGTCAGGTCGCA
TTTCCGTTAACGGCTCATTGAATTTGACGATGTGGTTCGCCGAGTTGTTTTTGATCGAAC
CCGGCAAATATTGTTTACTTATTCACCGAGTTTGCGATAGAATGCACTCGACAATGATAG
CCGAGTGCCTTACACCGAGTTTGAAACTTGGTAAATATTTTGCGGAGTTTAATATGTGCT
CTGTTGAGTTTTCCTAAAACTCGGCATTAGTAGAGATTCTACTAGTGACAACAGCAACCG
TTAGATTTCCCTCTTTTTTGCGGTGAAAAAGAGAGCTTATAATAATCGTAGGGTGGGATG
TCGCTCATCTATACACCACTTCTCGGTCTCCTCCGTACCCGAGCCTAGCCACAACGCTAC
CTGGCATACTACCTCCATAAGCCGCAAGGCTATGACTAACTTTATTTTGTGAACGACTAA
CTAACCTTAATACAACCTCTCTTTCAGACATCGGAGACTAAATCTCATGCACTACAACCA
TGTATCGTGAACGATCACCTTCTGCGACGGGATCATCGCAATTTCCTCGGAGCCGTCCAT
CTTCACAATAACAGGTAGCTGGGACCTATGGAGCGCTAGGTCCAGACCTTCTCTGCATGG
AAGACAATTCGGCTTCTAGACCGCTGGTGCAGGAGTGGAGTTCCCTGCAAGCAGAGAATA
TAATCGTGGCCACCTGATCGCGCATGACCATGACACACGCAGCCTAGCCATTGGCCTCGA
CTAACTCCCATTGGAATTTAGATTCACCCTTTTCTTGTGGCGTCTAGGAAGACTAGCAAC
TCCTTGATAGTGAAAAGGGGCTATCATGGGCAATGCTTGCGCAGCGGAAATGGAGAGGCG
GAAACATCAAACGTAAAGGAGGTTGTTGCCCTGGTGCCAAGAAGATCAGAGAAGTAAACG
ATGTAAAAAAACAGTGATGTAATTACGTAGGATAGCTTGTTTCCCGCTATGTGATGAGAC
ATGGAATCATTTTAAGTTTAATGTTTCAATTTCATTCTTGTGAAGCCGAGCAAAATATTT
GAAGTTCTCGTTCCCAAGGATGCACGCCCTCAAATAAAAAAAAAGGATGCAGACCCTCAG
TTCCAAAATAAATAAATTCCAAGCCCTCCAAAATAATGATGGAACGTTTTTGAGATTTTT
TGAATCCACGGCCACTGTTTAGCTGCACTGCAGACTTTTAATTTTTCTGCAGATAAGGCC
AACATGCGACGGAACTAGTCTTATGTAACCCTTCCCACGTTTATTCCCTTGAAATATTAG
CTTTGCCCCCAAAACTAGCCTCCACTAGACCACTCGGTATTTGTTCTCTCCTCCGCTCGA
CAGTCTCTCTGTCTCCCCCCCCCCCCCCNNNCCCCCCCCCCCCGCCGCGCGGGCCGCGCC
C