Contig Data
morexGenes
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Map Locations of contig_59273 (8008 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_59273

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71169 1 667 bp None Available Available None
MLOC_71170 1 277 bp MLOC_71170.1 Available Available None





CDS Structure of MLOC_71169






CDS Structure of MLOC_71170






Contig Sequence (8008 bp)

>contig_59273 8008 assembly3_WGSMorex_rbca.fasta
CCGCCGCTACCGCATCTCTCTCTGGTTCCCCACCGTCGCCACTACGTCACGACAGTCACC
GAGGGAACTCATCGAGCACGGGATAAGGTAACATACCACTACTCTCATCGAACACATCTA
GACTTGTCGATCCACGGGATCTATCAAACCGTGCATACCCTTGAGCATTAGCCAAGTTTA
TATCTACTTAATTATTGTGACAAATAGAAGTGGATATTCATTTGTGTCAGATGGGGAGAA
AATATAAATAATCTTTGTGTTCTTTTTCCTTTTTAGAAACAGGCAGGTAGTTAGTATCTT
GCCCGGATACTATGTATACAGCCAGTAAAGATCAACCATATAATTTTCCTATGTATGGAC
TGATACAAAAATTATTAAAAAATAAGGTCTAGATTTTAAACCCTAAACCGGTACAATTAA
TAGCACAGATCCTTTATCATATACTCCCTCTTTTCGGAATTACTTGTCACACAAATGTAT
AAGAATAGATGTATCTAAAACTAAAATATATCTAGATACAACCATTTATGTGACAAGTAC
TTCCGAATGGAGGGAGTATTGTAAGAATCACAATAATATAGATAATTTAACACCTTAGTC
TTGTATCACAGATTCGACAGCAAAAGAATTGTCATTTACTAAATGAAAAGCCTAACTGCA
GTTAGCAGTAAGAGTGGGCATCTAAACAATTATTATACACACCTCTAACCTGAGAGTGCT
TGGTTCACAGAAAGCCTTTTATGTGTATGCAAATGTAAATTTCTCCCAGGAAAACATCAT
TTGAGAGCATATCAAAGCATACATATTATGTACTATCTGCATAAGTGCATAACCTGATTT
TGTTTGAAGAAAATGAAAACCATGAATGACAAATTGAAAAGCTCACGGTACCTAAGAAAT
TAATGAACAGGAATTTGATTTCCCCTCACACATTAACACAAGCATGGTACCAGCAGGTTA
GATCGAGGCACAAACGTCAACCAGGGAAGCACGTGAAATAAAAGAGGAAGGGCACTACAA
GAGAAAAAGAGTTATATCTAACGGGCGGACAGCCGGAGCTTCTTTGTAGCTCCCGTGGCC
ACAATCTCGCAGCGGAGGCGCGCAACATGTTGATCCCGTGGCGGACCACGAGTGCACGGT
AGCAGCAGGCCGCAACAGCTCCACGGCGATCGAGCGCATCCTGCATTGATGCTAGGGACG
TCGTATGCACGCGCGTTGCCGGTCACCAAAAAGGCGACGTTGGGCGGAAGCAAGGAGTGG
CGGAGAGGAGATGGGGAGAGGACGGTCAGGGGCGCCGCGCCCGTAGGTGAGGTGAGGTGA
GGTGAGAGCCCGGCTGTGGAGCTCTTTACGAGTGACATATTGATCTTTGAATTTGGCATA
ATTTTTTATGAGCACCCAACAATGCGTGAGGATGAGTGGCTTGTTCTTATGTCGTGCCTT
GAAATCTTCAAAAGATTAAAATGCCTACACAACATGAATGGACACAAAATGCCTACACAA
TAAAAAGCATGCCAACATGAATGGACACAAAATAAAAATGTGAGAGGTACATACCAAGTC
ACCAACGCCTAGGCCACTCATGGGACCGGCTTGGACGCTCTCAAGCGCGGCACAATACTT
GTTGCATCCTTGTTGAATGAATCCCCATCACTTTTGGATTAAGTTGATGTTGCGAGTACT
CACAATTTGGTAGGGACAAACTTCCTTCGCTCATGGAAGGTACCCCTTGTCCAAAAGATG
GATGCCTTTTGCTCGGCACCTTTTATTGGATCTTCCCCTATCTCAATCCAACTCTCGCAA
ATCAATTTATCCTTATTTTGGGTGTATGACCCCACGCAAATGATTTGCCTCCTCTTTTGT
GCCTCGGCCATTTGAGTGAGCTCATCGATAAACACCAATGCCTCTTGCAAAATGTGGACC
TTGTCTTCCTCATTTTCACAATATAACTCATCATCAATATGCCATGAGTTGACATGGTTG
TCCTTCTCTTCATCATGGCCGACGAATTTAGTGTCCTCATAGTGGTCGCGGTCGTCCTGG
CTCTACCTCTCGTTGGGACCGACAGCCTGGCCTTGACCCTCGTAGTGAAAGGCCTAACCA
CGGCCCTCGTAGATGACGCTCTCCATGAATGCCGAGCAATCACGATAGTCGGTTGTGGGC
GTCGGAAGTGGTATTGTGTCGAACAACTTACGGGCGTCGGATATGGTTGCCATCGGGAAT
GACCGGGGCTGCTTACTGTGTGTCCCGCCAGTCGTCTGGCCAGCGCCACTTTACATCTGT
ACCTCGGCATCATGTTTTAGGTCGATGACCCCCGCGGACGTGGCGGGAGCAACCACGTTG
TACTCCGGCGGCGTGGAGAACCATGTCTGCCCATGGCTGTCCGAAGGACGGCACCCTGGC
GTCTCGGGTGTGGTGGATCTGTACTGAGGAGGACGAGCGGCCGACGGTCCCATGCTCGCC
GTGGCCATGGCAGCGATCGAGAGGATGACTGACTGTAGTCCTCCCAACCCTAACATGAGG
AGGGTGTGCCCGTTGGAGATGATGGATTCCTTGTTGTCAATGTCGGCAAGATGTTGCGCT
TGACGCGGGGCGGCGGCCTCGACGACGTAGGCCGCAACCGCCATCATCTCTCCCACCTTT
AAATGCCAGTCCCTCCTCTTCGCCAAGTCGGCATTGAGTTTGGCGATGATCGCCAACGTG
AGCTCGGAGCGAGGCTTCCTGGGACCCTTGGGACCCTTTTCTTCGCCGTGAGGGGCGCGG
CTGCTACCGCATCGCCAGGGTTTATTGCGTCGCCGTCCATGAAGGAGGGAGGGGAAGGGA
CGCGCGAGAGAGTTTGAGCGATATGGAGAGAGAGTGGGAGGGGTGTGTCCCGGATTGGCG
TGCCAAAGGAGGACAATGGCGCGCATCATGCCCGTCGGCGCGCTGTCTGTTTGACTGCAA
ACGCAACCCAAACTTGAACTCGAAATGGGTTGAAAACTCCCGTGCGTTGGGCCGTGGTTT
ATGCCTGTTTACATCTAAACGAATGCAGGCGGACGAGTTAACGTCGTGCCTTGTGGTTGC
CTTAGAGCAACTCCAACCGGCCGACCCAAACGGACAGCGATTTTGTTCGCTTTTCGTCCG
TTTGGGTCATCCATCGGCTCCGTGTTCACCCGGGTTACGATTTGATTTGAGTCGGTAGCG
TGTCCAATGCGCCAACCCATATTTGTCCGTCTGGCCGGCTAGCGCCGGTTTTTGAACAAA
TACGGATATTTTATATATTTTGCAACAGCAAATGATATAGCATAGTTTCACAATCAAAAA
TAAAATATAGAAAAGTTTTTCAAACCCAATAAAAGTTTAGATTGTCTACAAAATACAGCT
AGTCATTGCCAACATCATACCACATATGCTCAACCAAATTATCTTGCAACTGAATATGAG
TTTCCAAATTACGCATTGCGTGAGGAAATGGGATGAACTGTGCAAACGATGTCGCTTCTC
CGCCATGCTGAGGCACCACAATGGGCGGCGGCGACGGCGAGGGGACTAGGACCGAGGCGA
GGCGAGGGCTAGATGCGGGTGGAAAACGACCAATGTGCCACCGACTCGCGGGCCAGGGAA
TGGTCGTAGTGTGCGTCGTCCGTGTCTGCTTTGTGTCCGCACCGATTCAAATCAGGCTCA
AAATTGGGTCGAAAATGGATCGGCAAGCGGAAAAATGTGAACACGCGTCCGTTTATGTCA
GGGCGTTAGACCGTCTTTTATATCCGTGTGTATCTAAATGTACGGCGACGCAGGAAATGT
GTCGCTCTGTTGGAGTTGCTGTTAAAGAAAAACGGAGTAGGAGTGCAATGACTTTCTTTT
CTGAGCGAAGACAAGATGTGTGATAGTACAGTAATGCTAGGCCTACGTAGCTATAATACA
TAGACTAACCTAATAGTTTAGGTGGCGTTTTTTAATTTGAGAAAATTAGGGAAGGGGCCC
ACCCAGTTGAAATCAGGGCTGAAAGGATTAGTAGTTAGTTAAGTTACGTAGTCTTATGTA
AATTTTTATGTAAGCGTAGCATTTTTGCACGTGAAGCAGAGAGTTGTACAAATGTTACTA
GTAGCAGTTGTTTATTCAAAAATGCTAGACTTACGAATTGTTTTACGTAAAGTTACGAAC
CTCTGGCAAGATAATAAGATAATACTCCTGAAGATAATACACGGCTACATAAATTATTAC
TGCACATCATCATCAGATAAGTGCATGAAGAAGAAGGAAGAAAACAAAAGAAAAAGTACA
TGAAGGAGGAGAAGCGCACTACATCATTCGGCACTGCCCCTGTCACAGTGTCACTGAACA
CTATACAGTCTATCATCATTCATTCACACATTCATCAGACACGTACGGCCGTCGATCAGT
TTATTGCGCCCGCCCTAGCTAATCACGGCGTCTAATTAGTGGAAGGAGGTGTTCTTGAGG
TGCTCCGGCGCGTCCTGGAAGGAGTGCTTTCTGGCCAGGGAGAGGATGGTCTTGTCGGCG
ACGATGAAGTAGGCCATCCCCGCGACGGTGGAGATGATGAGCGCCTGCCCGGTCGGGTTC
AGGTATGCCTTGGCCCACGGCAGCATCCTCACGCTCGCCAGCTGAAATCATGGATAGCAG
ATTCATGAGACATGCGATCAACTATGGAGCGCGCGATCTCCTCCAACAACCAAATGGCTA
GCTTTCTGGATACTTACTGTGGGCACTGCGGCTGCGACGGTGGCGACGGCCGCGGCCTTG
GCTCCGGCCATGGCAGCCTCTGCAGCACACACATGTAACATGTTAATCGCAATCAAGTTC
CGACAGACACAGACAGCACATAAATAAGCCGCAATGCATAACGGAACCGGCCGTCGCTCG
TTGGTTACCTACCTCTGGAGCAGCGCTTAGCTGCGGCGAGCCTCTGGTCGAGGTAGGCGC
GGGTGACCGTCGACATCTTCCTTCGCCGGGAGCAGAGCTTGGTTGTACGAGATCGGAAGG
AAGTGAACGAGCAGTAGCAGCAAAGCCAAGTGCAGTAGCTAAAAAGATGAGTAAGTAGTA
GTAGCAGTAGGTGGAGTGAGGTGCGGTGGGGAGAGCAAGGTGCTCCGGCGAGATTTATAC
GTAGTTCGCATGAAACCGCGAAACCGGCGTGCCGGGAGGAAGACGGACTTGATACGGTGG
GAATCAAGACCACGGTTTTGAGACGAGCGAGCGGTGGTACCGGCGGGAGGGCGCCTCGCT
GCAGCAGAGCACAGCACAGGTGGCCGCGCCTCGTTCGTCGGTCGTATAAAAATGGGAGCA
CTCCACTACACTTTGCACTGGATAAGAGGAGGCATCGATGGGGGGTTGGCACGGCGCTAG
CGCGCGTAGGATAACACGTAGGAGCATGTGCGTGAACGCAGTGTCACTCAGCGTGCACTC
CGTTTCGCTTCAGATCTGTGTGTGTGCGGCGCGCTGCCAGTTTTCGGCCAACCCGTCGGC
AATCAGGCAATTCCGCCGGCGGTTTGCTGATTTGGATCGTCTGTTTTTATCGTCGGTTTG
CTTTGGCACGCGCATTTTATCAGTTTTTCGTTAGTTTGGATTGTTTATTACGTGGATTTT
TTTTTTGCGACGATTGTTTACGTGGATTTGCGCGTCCGTATTTTTACATGGGTCGGCTTA
AGCGTCCAAGGAAAGACTGATCCAAATTTATTCGCGTAGAAAAAAAATAACACGTCGAAG
AAAAAACACGCGGTGGTGGAGGAGGCGGGATGAAGAGCAGGGCATGGACGGAGTCCCCTA
CCGCCGAACAAGCCGCTCCATCCCATCCCATTGGGCCTCCTCGATCTTGCTCGCCTCCAG
TGCCTCATGCACGACTCGCTCGAGGGCAGCTTGGTACGCCTCCTCTTCGTCCTCCTCGTG
CAGCAGAACCTCAGGCAGCGGCGGAGGAACATCGTAGTCAACGTGCACGACCCGGCGTCG
CTCCTTCTCGTGCTCTAGCGCCAACCAACGCTCCCAGTTGGGGGAGTCTGGCGAGTAGGC
ACGCATCTGCCGCTGCTCCAGAGTGAGGGTCTCACGACGCCGGAGAACCTCCTCGGCCTG
CGCCCACGTCGAGCGTGGCACTGCTGGAATAGGGACCCGTTGCGGATGCAGATACCAGTC
GTGAGGCAGGTTGACATCCGGATACTGCACTGGCCGGTGGTACTGTCAGGGAGGAGCACT
GCATGGCCAGATGTGGACGGGGGTTGTAAGTGGATGAGGCCGTCCTCACCGCATGCTTTC
ATAAAAAAGGAAGGGCACATGGACCGCCCACACACTACCAAGAGGGCCCCTAGGTAGGTG
ACGGCATTTAATAAGACATGGCTGGTGGTTGGGCGGTGCACAAGTGGGACCGCGGCGGAC
ATAGACCGGCCGCGCGGCACGCCCGCATCGCGTCTGCGTCGATGCATTTCAGACGCAATT
TTGGGTCGGAAATAGGTCCGTGCGGACGCAATGCGTACGGATTTTGGGAATGGGTCGCCG
CGTTGGGCCGGCGCTTTTGTCTCTGCGACTCTAACGAACGTGGACGGACAAAATGGGTCG
CCTCGTTGGAGTTGCTCTTATATATCCAAATGGATATATATTATCATGATTTATTATTGT
TAACATTATCTTTAAGGTAAAATAAGTTAAGTGGCAAATTATTTAAGCCCCAATCTTCCT
ACATGTCCTATATAAACATGAGCTTCGAAAATATGTCTTGAGCGTGAGCAATCATAGAAG
ATTAAATGATAGTTGAGTATATGAACGTGTAAAAAAACTCTTACATAGACTTTTCTCTGA
AATATAATGAATTATGATTGTCTCAATGACTGAGAACATTGTTTGTTGATTGTCAATAAA
GTTTATTCTTCTTACTCCAATATCTATGAATGGATTATTACTTGTTTATGAGGAGCTATA
TAATAAAATACTTACTACTATGTTAATATTCCTCATGCTCTCATGTTCGTATTATATTTT
TATCAACACCTCTCTCTTAAATCTTGTGGTAATTATTTTCAAGTTTGGATTTTGCTTGAG
GACAAGCAAGGTCTAAGCTTGCAAAAGTTGATAAGTCCATTTTGCATCATTAATTATTAT
TAATATTTGTATTATTCTTGTCCATTATTTCTTATTATCACATCATTCTTATGTCATTTC
TCTTTGAATATGTAAGGTATATCATAAAGAGGGAAATATCTGGACATTGAAATTCTGAAC
CGGGAAACCGGAAAAAGGCAAAAAAATCAAGATGCTCCAAATGGTGTGAAACTTGACGAA
GAATTTTTCCTTAATATTTAAAAATTACTGGGTCAAAAATATGCCACAAGGGAGCCACCT
ATTGGCGCCAAGGCAACAGGGCGCGACCACGCCCTTGTTGGCCCTTCTGATGTCCCTCTC
CTCTTATATGGCGTGTTTTGACCTAGAAAAAATGATAAGTAACCTTTCGGGGTAAAGCGC
CGTCGTCTCGAGGCGGAAACCTGGGCAGAGGCCCTTTTTCTCTTCGACAGAGAGATTCTG
CCGAGCAAACTTTCCTCCAGGAGGGGAAAATGAAAGTTATCATCATCACCAATGTTTCCT
CCTTCGTGGAAGGACCGATCTTCATCAACATCTTCACCATCATCATATCGTCTCCAAACC
TAGTTCATCTCTTGTATTCAATCTTTGTCTCGGGACCTCAGATTGGTACATGTGGGTTAT
TAGCTGTGTTGATTACATCTTATAGTTGATGCTTATTGGATTACTTGGTGGAAGACATTA
TGATCAAATCCTTAATTATTATTATTACACCTCTCATCTTGAATATGTTGATGAGGTGTG
AGTAGTAACTATTGTTCCCGGGGACATTGGAGAAGTCTTGTTATAAATAATCATATAATG
TTGGTATTCGCTCGATATTTTGATGATATGTATGTTGTTATTTCTTTTAGTGGTGTCATG
TGAACGTNNNNNNCATGACACTTCACCATGTTATGGGTCCAAGGAAAGTCATTATGGAGT
AACAAGTAGATGATGGATTGCGAGACTG