Contig Data
morexGenes
Links



Map Locations of contig_59221 (4385 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_59221

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71133 1 1377 bp MLOC_71133.1 Available Available LOC_Os06g51370.1, FRAME:+3, EVALUE:2e-172, 13106.m05549 protein OsSCP38 - Putative Serine Carboxypeptidase homologue





CDS Structure of MLOC_71133






Contig Sequence (4385 bp)

>contig_59221 4385 assembly3_WGSMorex_rbca.fasta
AAGAGGTTTTATTAATGGACTACATATGGATGTATANNNNNNNNNNNNNNNNNNNNNNNN
NNNTCATTTTGCTCTGTATGTAGACTTCTAGTGAAATATCTTAAAAGACTTGTATTTAAG
AAGGGGGGAGTATTATACTATTACGATATGAAATCTATACTTTGCATGCATGCATGCAGG
GCCTGGATGCTCGTCGCTTGGATACGGAGCATTGGAAGAGCTGGGGCCCTTGCTGATCCA
GAAGGGAACCCCTGAGCTCAGGCTCAACCCCGACGCATGGAACAAAGGTACCAAACAATT
CGATCGTCAACATTGCCATCAAATTTGCTAGTTACAGTTTCATCTTAGTATTGGGTAATT
ATTTGTGTGTGTGCAACCGCAGAGGCAAATCTGCTCTTCTTGGAGCAACCTGCCGGCGTC
GGATTCTCTTACACGAACACCACCGCCGATCTCGAGAGATTCGGCGACGACCTCGCTGGT
ACGTATGCATTGTATTATTATTATCCTTGGTTTATTTTTCTGGTTTTCTTAGTTAACTTG
AGTGGATGCGTTGGTGAATTAGCTCATGACGCCTACACGTTCCTCGTCAACTGGTTCGAG
AGGTTCCCGCAGTTCAAGGGCCACGATTTCTACATCGCCGGAGAGAGCTACGCCGGTGAT
TACTCCTAGCTTTCCATTTGAATCCAATCGCTCGTGATCTCGCATTAACTACACGGTATT
AGATACGTTCTAACCAAATTTGTGAATCTTGTAGGGCACTACGTCCCCCATCTCGCCGAG
AAGATCGTGGAGCAGAACAAGAAGGTTCACAAGAGCAAGCACATCAATTTCAAGGGATTC
ATGGTATGTGATCACTTTTTTTTCGCGCAAAAAAAGAAAAGAAATGAACGAATTACAGGC
AGATGTTTTCTCGTGACGGTATTCTGTATTTATTCATCCTATGTACGTTCCCAGATCGGG
AACGCGGCGATCGACGAGGCGTCGGACAACCGTGGCATGGTGGACTACGCTTGGGACCAC
GCCATCATCTCCGACGAGCTCTACGACGCCATCAACAAGAACTGCAAGTTCGACCAGGCC
GGGAACAGCAGCGACTTCTCGTCGTCTGGCCAGAACCCCAGCAACGCCGCCTGCGACCGC
GCCATGGACGGCTTCTACGAGGCGTTCGATCACATCGACATCTACAGCCTCTACACCCCC
GCCTGCACCGCCTCCGCCGGCACGGCGGGCCAGCTGCCGCGCCGCCTCCACCGGCCCTCC
ACTTCCACTCAATCAGACAACAGCAGGCACCTGAGGCCGCGATACAACAGCTACGACCCG
TGCCTGGACAACTACGCCGCCGAGTACCTGAACCGCCGGGACGTGCAGGACGCGATGCAC
GCCAACACCACCGGGAACATCCCCTACGCGTGGACCGCGTGCAGCGACCCGCTGTTCCAG
CACTGGAAGGACTCGCCGGCGTCGACACTGCCGGTGATCAAGAGGATGGTCGACGCCGGC
CTCCGTGTGTGGGTGTACAGCGGCGACACGGATGCACGCGTGCCCGTCTCGTCCACCCGC
CAGGCGCTGCGCAAGCTCGGCCTCAAGACCCTCAAGCAGTGGAGGGAGTGGTTCACCAGC
GACCAGGTCGGCGGCTACCAGGTGGACTACAACGGCCTCACCATCGTCACCATCCGCGGC
GCCGGCCACATGGTCCCGACCGTCACGCCGGTGCAGGCCAGGCAGCTCTTCGCGCACTTC
CTCGCCGACAAGGAACTGCCGCCCAAACCCGTCGTCGCTTGAGCTTGGAACTAGCTTAGT
GCTTTAAAGCCACTATAGGCTATATAGGGGTTGTTTGAGTGGATTGTCGTCGACCGATCT
CATAGTTTGAACAAAAATCTAGTTTCAAATTTCGTATGTAAATCAGAACTTCCGTTGCTT
AGTAATTTCCCTACTAAATCGAGTTGACTGGCGTAAACATGCATCTGTGTGTCTGACATG
GTAACATCTGCGTGAAAATGAACCAAATTGACCCTTTTTTGAAACTTCAACACAAAATGG
CCTCATTTAAAAAACAATTCAATAACTTTTTGTATGACGCCGAGGACTAGGGCGTCATGC
TATTTGGCATTACACCCTAGCCGGGGCGCCATGCTTGCTACCACGGCGTCCCAGGCTAGA
TGTCATGCTACCTAGTATGGCACCCTAGCCCGAGGCGTCATGCAAAAAGGAGGAACCAGT
TTATGAAATATTTTTAAATTAAAACCATTTTGTGCTATTTTTTTAAAAAATGGCATTTTT
CTATTTTCATACATACCCGAAGGCGGACCGCGAGCTACTTGGTGTGCGACACTTTTTTTT
TGAATTTTCATTGGGGGGGTGTCCCCCCTAATATATTACCCGGCACTCCAGAGGTTAAGG
GGGGGGGGGGAATCCACATGTGAACGACATTTTTCACGAAGCCTTAGAAGACTACGACAT
TTTGATGTTTCCATAACTGGCAGCAGCAGAGCATGAAGAACTCCATCGCCGAGCTAACCA
CCTCTTAATCAAACACGGCCTTCACAAAGACCGGCTTGGGCCATCTGGCAAGCTTAGACA
CCCTATAGCCATACGTCGCGTTGTAGGTGTGTTGCGGGTTGATTTGACAGAACGACAATG
ACCGGCTAGGGCCAAATCATCACATGTTAGACAAATATTAGGGCCTCTTTGAAAAACGAA
CCGGATCGTCAACTAGAGTCTGGAGATCATAGTGGCAACTGGCGTCTGGCAAGGTGACAG
GGGACCTAACGTACACTATTAGGAGAAAGCTTATAGGTAGGATTTTAGCAGTAGCACTGT
ATAATACAGACGCGCCACTGCTAAGTAGTAGTAGCGCGGGGCAGGTACATGCGCTACAGG
TATCTAATTAGCAATAGCGCTGCCATTCAACACAACGCTACTGCTAAGTGTTCCCATCGC
CACCGACAGGGGCTACCTGTAGTAGTAGCGGTGGTCGAAAACCAACACTACTACTAATTG
CATAACACTAGCGCGTGTTGGTGGCCCACCGCTACCGGTATGTGGGTACGGTGTCAGTAG
GTGGGCCCCTATTAGCAGCAACGCTGGGGCAGCGACACACGCTACTTCTACGGTGCTTAG
CAGTAGTGCTAGCCGGCTACCAGCGCTATTGCTACGCGTAGCAGTCACCTTTTCTCCCCC
TCCCCCTCTCCCCTTTTCCCTCTCCCTCCTCTACCTCCCTCACTTAGTTCTTCCTTCTCC
TACCTCTCTTCTCTCCCCATTCATGGCCCCCTCCACCATCTCCTCCATTAATGAGCTTCA
TTAATGAGCTCCATTAATGCATGGCTTCTTTCTCACTTTAATTTATTTGTCTCTCCCTCC
TTCTCTTTTCTGGTCCGGCACACTCATGCATTTGTCTCACTAGCTAGCTTTCCCTCCCTC
TCCACTAGTTAGGTAGAGCATCTCCTTCTAACTAGAACTACGATGCATCTTTGTCCTACT
ACTTTCGATCCCTAGCTATATATAGCTAGATAGCGGCACCGGCCATCCACCGTACGTTTG
CTCGATCGATTCCACTCTCGGGACGAAAGGTGAGCAAAAAGTTGTGCTTTGCAAGAATTA
ATGGAAATATGTGTGTTTGCGCTATGATGGTGGGAATATGTGCGTGTGGCATGACTTTCC
GCCTATGTGCATTAATTTGTCGGATCGTGCGTGACATGAGTTGCTTATGTTTTGCTGAAA
TGTTGATTTATATCCGTTTCGGTGAATTTTGGGCAAACTCTATATGGCCTATTTTTATGG
AAGGTCATGCCAAAATTTTGTATGACTTTGATATATGCATGCATGGTTAAAATTCTTTTA
CTTATTATACCGCGCAGGCAATCATGAAGGTCAGTGGAAGGGTGGTGGAAAGATGGTTGT
GATCCGCGGTGGAGGACATGTATTTAAATAACCAGACTGGGGTTATATGTGTGTGTAGAA
GATCTTCATCTTGAACCCCTTTGATGGCGGCAGTTTGAAGGCGCACCTTTGTAAGTGCAT
CTAGTTCTCCTTAGTGATTTTGGTGTATTGANNNNNNNNNNNNNNNNNNNNNNNNNTGTT
TGTGAGTGTACACAAGCTTTATAAGTCGGTCAGGAGTTTGAGTTATTCAAAGAATATCAA
GCCCTAAAAATTAATGTATCATTTTCTCCAAGACTTTGCTAATTCCTCGAAGACTTTGAA
AGCGAGGAAATTGGTGTATCCCCGAAGAAATTGATCTGGGTGAAGACTTACTTTTACTGT
TTCATTTTCCTCTTTCTTGAGTCATAGGAACATCGTACTGTTAAAGGGAGTCAAGGTAAA
ACAAAGAAAAAGTTTCCAAGTGATGCTCATCTCAAAGCCTACACATAACCAATCCTTCGA
GTGAA