| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
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Predicted Genes from contig_59146
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_71100 |
1 |
1370 bp |
MLOC_71100.1 |
Available |
Available |
LOC_Os05g43780.2, FRAME:-1, EVALUE:3e-48, 13105.m10402 protein ESP1, putative, expressed |
| MLOC_71099 |
12 |
1925 bp |
MLOC_71099.4 |
Available |
Available |
LOC_Os05g43790.1, FRAME:-2, EVALUE:0.0, 13105.m04615 protein DUF803 domain containing, putative, expressed |
| MLOC_71098 |
1 |
435 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_71100
CDS Structure of MLOC_71099
CDS Structure of MLOC_71098
Contig Sequence (6768 bp)
>contig_59146 6768 assembly3_WGSMorex_rbca.fasta
GGCTTCGGCGAAACCAATTAGTTCCAGTCGGCTTCGACGAAACCAATTAGTTCCAGTCGG
CTTCGGCGAAACCAATTAGTTCTAGTCGGCTTCGCCTAAGCTGACGGTGTATTATTCTTG
AAAATTTTAAAACCACGTATTATTTCTCGAATTAATGAAAAAAATGTATTATTTAAAAAA
AATAGCTAAAAGTGGTAGGTTTCAGGAAATTTTTAAAAGGTGATAGTTTTCCGGAACCCT
AGCCCGAATTGTGGTAGTTTTATGTTATTTACTTCAAAAAAAACTATATAAGTTATATGC
GGCCCAATCATCTGAATTCCCTTGCAACTAACACGGCAATTTCATCAGAATTCCACACTG
AGCATATGAGTCCAACAGTAATCTTTTTCCCTTAAATAACCCACACCCCACAAAAATCAG
GAAACATAATTCCACCCCGCAAAGTTTCAAACGCGATTGAAATAAGGATCCATGTTCCAA
ACTGATCATAAGTCCTTTTCTGGGATAAATTATTGGTTATCCTCAAACATAGGTGCTGAA
ACAAAAAAGAAAAGAAAAAGGAATTCTACGAGAACGGCGCTAACAGAATGTACAAGATTC
ATAGTTCAGATGCATGAAAGCTCCGCCTGATCGCTCTGAACAAGTCAACAAACTCAAACT
GTACAAAGAGAAGAAGAAGAAGAAGAAGAAGAAATGTTGTGAACAAAAATGAAAAGGGAA
AAAAGAAAAATTACGGATGAGGAGAAAAAAAAACTTGGCAACAATCTGTGCACATGTCCT
ATCTGGTGAAACTCCGCCGTCTCCCGGATACCGTATCTTCCAGCTTCTGCAATACCAAAT
TATGTACAGGCCAACACAACACAATGGAGTAGCCGGCAATGTGTTGATCACAGCTGCTCC
GTCATCCATCGCTGCCATCGTCCAACATGGCTAGTACATCTCCTGCCGTCTCAAGACTTT
CTCTTCGTCGTCGGTTCTCCTCGCATCATCCTCGACGTGCCTCAGTAGTTCTCCGTTCAA
TCTTGTTGCCGACGTGGGAGACAGCGGTGCATAAAGGCCTACTTCACGACGAAACAATGG
GGTGTCATGGGCATGGATTAAGCGAGTCTGAATATATGATTGGAAAAGGTGGAAGTTCAG
TAAGGGTTACATACTTCTCGATTGTGGGATTCTTTCGTAATCCTTTGTGACATGCAACAA
AATGGTACCGGACAACACGACAATCAAGCCACATATTTCAGAAGTAATGCTTCCAAGGCT
CTGACCAGACCAATCCTGCGCTCATCATTATAATACAGTAATACAGTAAGAGGTTCTGTT
AGCTCATTTTTTTTCCGTTAAAACTAATACTACATTAAGAGATTTGGTAAGCTCATATGG
TGTTCTCTTCATCAAAATGAATATGTCAACATAGTGGTGCTTAGCAGAGCATAGCATTGT
TTAAAGGTTGCCCTTGCTTGGCATTACTAAACTGTTGCAGGATAGGGATACAAAGTAAGC
CAAAAATTATGCTAAGCCGTAGTCTCAGTAGCTTAGGATAATAGATATGAGGTGTGGATG
AGATAAAGGGACAAAAAATGACAAATGTCTCCACGTGGTGCCAGCAAATATGTGGCAGCA
ATTATCTAATAAACAATTCACACCATTTGAGTTTACCTTAAACATTATGATGCTTGCAAG
TATTGTCAGTGACGTAAACATCACGTAATAAATCGGTGATACAATGGCCGTGTTAAACGT
ATCAAGTGCCTGGAGAAAATTGAACAGTTACTACAGGGATGCTGCCAATAAAATAAAATT
TGCAGATGGACATGGGCACCCGAATGAGAAAAGGCCACAGGACATAAAGCAAATTAGAAA
TAAAGCTAGTATAGAATACTTATGAAGAACATATTTAAATATGTTTCTACATTGCACAAA
CAATATACCCCTACACAATTTATCATAATCATTCAATTCTTCTCTTCATATATGTACGGT
TGCAGAGAAGAATGACAAAATGCGACGCTCTAGTCCTTATCCAAACGAACAAAAATATAC
ATTTTTTGCTTCAACAGCAATTCATGAATTCAAATTTGATGTTCTTAGAGCATCTATAGC
CGGACCTCTCAAATGACCCCTCATATGTTCGCGGACGCTCCCGGTCAGTGACCGGACAGG
AAAGAGAAGGAAAGGTGTGATCCAATCAGACCCCTCGTATTGTCCCTATATGTTTGGGCT
GTCCCCGGACTCTCATATCCGTCTCAAATATGGAGAGGATATGAGGGCTCACGGATGCGC
CCGGTCAGTCCGCTACATAAGACGCGGCCCCATCCCGAACCACATTTTTCTTTTCTTTAT
TTATTCTTTTCTTTCTCTCTCTTCCTCTCCACCAATCACATGTAAGTGAGCGGACATATA
CGAAAGAAAATGAGGAATGTGCCTGCATGGACGGACAAATAGGGATGACCGGGCGCGTCC
GCGGACATTTGGGGGACCGAATTTGCAAGTACCAGCTGTAGATGCTCTTAGTTCTTACAC
CCTCTAGCTCTGCAAAACATGTTACTTTTAACATGCAGCGGAGTTCTGAAACTTTGACTA
CCAATATCTTCTAAATTATGTAGAAGGGGTACATGAAAATCATGAGTAGAATTGAGTTGC
AATATCATCCATCATAGTATTGTTGGGCTGTATAAATATACTACAATAAAAGCTAGTGGT
CAAAATTGACTTTTGGGGACCGTTTTGATATCCATAGCAAGTTCTAAAGAATTGGAGGGA
GTACTATGAGTCAATCTTCCGAAAGCTGTTGCTTGATGGCATTTACCATAAGGATACATA
TTATAAACAATTGATTACTGAATATACATAATGCACTCAAACAAACCTTGTTCAGGTAAT
TCATCTGTGTCAGCACACAAATAGCCACCACAAGCATAAAGAACCACGTCTCAGGATATG
CTAACTGATTTGTCCCCTCAAAAGTCAACTTTAAGGATGTACCAAGAGCTTTAACACTCA
TAACCTGCGTAAGGAGAAAGGGTCAGAACCTTCAACACGAAGGTTAAAATAAAAACTCGG
TGATCGCATATAAACTGTTTTTTTAGAGAAAAGACGTCGGCCGAACGCGAGAAGAGCTCG
AAACTAGGCCGACTTTGAATTAACAAATCCAACAACCGCATATAAACAGTTATACATCAG
AAACCGGTGTTAAAAGCGGAGCGACATTACCGAAAGAGAACCCATCAAAGAGCAAATGGC
GGTGTAGATCAACACGTTGGACTGCCCCCAGAGAGGGGATAAATGGAACACCAGCACAGA
GACCAGGACTATGACCGAGGCAACATATAGCAAGAAAGCTGCAGAGGAACATGAAGAAAA
CCCTCTGTTATTCGACCGCGCTCCCTGCAACCAACAGCGAACTAAAATGGCACCCATGAT
CATCGATCATGATAAACTGACAATCCTCACATGGTTGTGTCGCCATGTGCCATATCTCCT
TGACCGACGTGATCTCCTGCTCCACCGGCGCGTGGATGACGATGACCATCGACCCCGCGA
TGCACATCACGCAGCCGAGGACCCCTAGCGCGTGCAGTCTCTCGTTCAGGATGAAATGGG
CCAGCACTGCGCTGGACAAGGAAGATAGACACGCACCTTCAGCATCACATCTGAATCACA
GGATTGCAAATCGAATTGATGGCTCGGTTGTATGTGCGTATGCACACCTGACGATTATGC
TCAATGCACCAAGAGGAGTAACCAGCACCGCGGGGGCGAAGGCGTAGGCCACGAAATTGG
CGATCTCTCCCACGATCACTGAAAAGAGAGAATAGAAGAAGATACAATCACTGAAAAGAG
AGAAGAGAAGAAGACAGAATCTGGTTTGAGCAAGCTAAGAACTGAGCTCTGTTTGGTGCA
CTGAGGATTATACTTTAGAGAAGAAGCTTACTGGTGATCATGCCGACCCACCATAGGGGC
TCCTTGAGGTAGGAGTGCCCACCCACCCCTGCACAGGAGGCAGGCAAAAAGAACAAAGAA
AAGAAAAAAAAAACAGAGGACATTTTCAGAGGACGAAACAAACTCTGAAGAAAGAAAGAG
ATGGCGTCGAGGGAGGGAGGGAGGGACCTGCGCTGATGCCGGAGGCGAGGGCGGCGCGGC
GGAGTCCCTTCTTCTTGATGATGAAGCTGGAGCCGATGAAGCCGCTGGAGAGGAGCGCGA
GCACTATCCCCCGCACGTTGTCCGCCGACAGCTCCTGCCGCCCGCCCCCGCCTCCTCCCC
CCATGTCCATCCCTCCGTTCATGATCGCGATCGCGAGCTCCTCGGGTCGATTGGTTCCGG
CACGGGTCGGCCGGCCGGATCGGATCGGATGGCACCGCCACCGCGCAGCTCCTCCTGTAT
ACAGTGATGGTCTCGAGGTACGGGTTCTTGGATGGTTGCGGCGCGTAGGATTTTGTTTCC
TGCGTGTGTGGGTTCTTGGATGGCAGGATGAGGAGGGGGAGCTGATTGGCCAATGGCACA
GGACAGGGTGGAGGGCGACGAAACAGCACTAGACACGCTGATCCGGGCGTCGCTTTCCGA
AATATTTATTTCCCTGAGCCGAGATCGCGCTGGTGGCATGGCTGGCTCGCTTGCTGACTG
GGAACGTGACGGCAGCGGCCGCACGTGGTGATTTCCAGCCTACGAGGTGTGTCGCCACTC
CCATTGATTTACATGTGCCATGTGGTTGCTTCATTTTAGTACTCCATAAAAGATGGGGCA
GGGGGGAAACCCCATTCGTTCAAAAAAAAATTACATGTGCCATTTTGTGTTTTTTGCTTT
TCTATTATTTCTTTTAGACTTTTATTTAGAAAAAAAAAGTGTGTTCGCATAGCAGCACGG
CCAATTCATCATGTGGGTGAGCCACATTCGTTGTTCGCATCAAGCGGGGTTGTCTTATAA
TCTATTTGCTCCCTTATAAAGATAAGGTCCGCCCTCTCCAAAAAAATAACTAAATACCAG
AGCTTTCAAAGAAAATAGTACCCCGTCCTAAAATAAGTGCCTCAACTTTATACTACTCTG
ATACAAAGTTATATTAAGTTTACACTTATTTTAGGATGGAGAGAATACTACCATGCTAGG
GAAGGAAAAAATGAGAAGCCAAACACCCAAATAAAAGGGGAAGAAACAAGAACGTTTGCC
ACCACCGTCATACTGTATATTATACAGTATCAAATATCAATCAGCCATCTCAAAGTGCTA
CACCCGTCATCAGACAAGGACCGGAATTCAATCATAACACGGCATAAAACCGTGCCAGTG
GCAGCAGCAGCAGCAGAGTACAAACACGCCGCTTCATTTGTCATCACTCAACCACCAAAA
TACATATCCAAACAACTCCCTGTAAATTACATATCCAAACAACTCCCTGTAAATAACGAA
ATGGGCTAGCGTTCATTCCACAACCACATTCCCAAAGCATGCGGCAGGCTAGCAGGGATG
CCAATCAGCTTGAACAGTGGCTAAAACGGGAGGATGTCACGGCGACGGCGTAAGTCGAGC
ATGGAGCACTCGACTGATCCAAGCGGCTCTATCGAACTGATTCTTCTACTCGGGCAGCTG
CTCGTCGCGTACATCACTGGCGCAGCATTTCTCGCAGCTGAAGCACCTGCTGTCGTTGCT
CCGGGGGCAGCACGTTGATCTGCTCCGGCGACATGCTCATGACTTGCTGTACTAGCATTT
TTTCCATGTCGGCTGTCAACTGCTCCAACAACAACAACGTGAGTGGTTCATTTTTGAGGT
AAAGAGTAAAACGTAGCCCATATGACCATTTGCCCTAAATTGCAGTTGCAGGGACACTTA
CAGGTTGTTATAATATATTTTTTTGAGAAATAGGGACACTTACAGGTGCTTCTGGGCGGC
CCGTCTGGATGCCGCCAATCCCTTGGGCCATCTGTCCAGGTAGACCTTGGAATTGCCCAG
GGAAATGGGAGCCGGCCGACGATGGTTCTTGACCACCACGCCCCCATGGAGCTGATCTAT
CGACTTGCATACTCTGGGAATTGTAGTGCGAGCTCACATGTGAATTAGCCTGTCAAAACA
AACAAATTACAAGAGTTAACTGTTGATTGTTGAGTCCACGATCGACACATCAGATAAGGT
GGGACTGTTAGAATCTGGCAAACAACAATAATCTATCTAAGGAGTGATGTATCATTTGCA
TAGACCAAATTTTAGGCTGTGCTTGATGTCCTTAGACTAAATTTCAGGTTGTGCTTGATG
TCCAATAAGTCAGCAATAAGCTGGCAATCCATAAGTCAACAAAACCAAAGACATGAATTA
AACCTGAAACTAGCTTGCTAAGGGTTTCCTATTCTATCTTTCAGAGGAGTTTATGCGCGA
AAAAATGTTAAAAGAAATGCTTAAAACTGTCCATGGATTAGGTCCTTGCTGAGAAAACAA
AAACGTTTTAAGCATGGCGTTTGGTTCAACTGTCCAAGCAAGAACCCTATGAGCAGTATC
AAATATTGAAAGGGAGAATAAATAATGATATGGTGGTAAAGAATTTGCAGCACGGCAGTA
TAATAAGTAATAGTAACATTTGAACTGCATGTGCACTGATTTTATTTACAATGTCAAGTA
TCAGTCAGAACAAGGAAAAAGAATTGTACTCCCTCCGTACCTAAATATNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTACATCCGTATGTAGTTCATTAGTTGAACCTCTAGAAAGACTT
