Contig Data
morexGenes
Links



Map Locations of contig_59141 (4179 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_59141

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71096 1 1251 bp MLOC_71096.1 Available Available LOC_Os03g01270.1, FRAME:-1, EVALUE:2e-142, 13103.m00042 protein expansin precursor, putative, expressed





CDS Structure of MLOC_71096






Contig Sequence (4179 bp)

>contig_59141 4179 assembly3_WGSMorex_rbca.fasta
ATACGGAGCAAAATGAGTGAATGTGCACTCTAAAATATGTCTATATACANCCGTATGTAG
TTTATAATGCAATCTATAAAAGGTCTTATATTTAGGAACGGAGGGAGTACAAGAGAAATT
ACAAACATGCATAAATTTGTGGATGGATGCGGGAAATGGATGGGAGAGCTTAGCATGTAT
ATCAACCGCCTCCAGATACCACAAACAAATTAATAGTTGCTTGAGGGATAGCTGCTCCAT
AACCATACTTGTGTAATAGAAATTTATGGCGCACATACCAGCTGCCTCCTCCAGATCCCA
GAAACTAAAGTTGTCACTATGTATGTGGGACGAGAGAGAGAGAGAGAATACGAAGGTAGC
ACACGACGAGTACACACATGGTATGTATGCATGCATGGACGTCTCGGCACAATAAATCCA
TGCATGCATGCATGGGCGTGCATGCTTTCCATGGGGATCAGCGGAAGAGTGATCAGTCAA
TCATCGAACTGGACGGCGGAGCTGTACACGGCGTCCGGCTTCCAGTTGGCGGGGATGACC
TGATCGGCGACGAGGGACCTGCCGGATCCGTTGGTGACCCGCAGCGAGAAGGGCCCCTGC
AGCGTGCGGCGCGTGTCCAGACGCCAGATGGAGCCCCACGAATGCCTCATCGGAACCCAG
GGCCCCGTCGGCTCGCCGTCGTCCATGAGGTCCACCTGCGCCACGTCGCCGTCACCATTC
CCGTACTCCACCAGAATCGCCAGGTAGTTTGGGTTCGACCCCTTCTCCACGTGGAACGTC
ACCGACAGCCCCGGGTACTCGCACGGCACCCTCTTGAACTGCATGTCGATGATCCCAGCA
TGGCGGAGCTCGTCGTTGCGGCCCTCCTTGGCCATGGCGCCGAAGGCGGTGCCGCTGAGG
TCGAAGTGGTAGCGGGCGACCGGGTAGTAGTTCATGTCCGTGATGATCACCGTCTCGGGG
ACGCCGGAGCAGGCCGGGTGAGCCTTGCCCACGCACCTTATCTGCATGCAACAATCCAAG
ATCAATGCATGTATGTTTGGAGCTGGACAAATGGAACAACAAGCACGTAGTGTCAGTGTG
AAGAAAACAATTAAACTGCAATGGCGGCTGACCTGGTAGCAGGAGCCGCATCCCTTGCCG
TCCTTGAAGATCGGCTCGTTTCCGCAAGACGTCATGGCGTTGAACGGCGGCAGGTTCACG
TTCTTGAACCCGCACGCGCCACCATTGTCCAACGGCCCGGCGCCATCGGGGGCGCCGTAC
CAGGTGGCCTTGGCATCCAACCAGCCGTCGGAGGAGCCGTTGGTGCTGCCCGAGCCGGAG
CCTGGGCTTGGGGTAGCGGGCGCAGGTGGAGGTGTAACGGGGTCAGGGCTGGGGCTAGCG
GGCGCAGGTGTAGGTGTAGGCATGGGCGCAGGTGTTGGCGCAGGCGTGAGTCCAGGACAG
CCGCAGCAGCCATTGGCGGCGAGCAGGGAGAGGAGAGCGACCGCGAGGGCGTAGGAGGAG
AAGGTCGCTGCCATGCCTCGCTTGCTTGCTGGTTACTGATCGATGGCCCTAATCTGGTGG
TTATTGTCACTGGCTAGCTTCCGAATTTATAGTCTGACAAACTTGGGCGGGTGGAGAAGC
GGACGAGGAGCCGTGATTGGCAACGTTGGCAGGGCCCTGCCGGTTCACATGTGGATTGAG
GGAGCCACTCAACAGGCTGCTTGCACCCTTGCCCGTGGTCACGAGATGATTTTTCTACGC
TTTTAAAAATCATCTTCCGTTCAATCATCAATCAAACATATATAGTACTACTCTAGTCTA
TATTACAGGTACTTCATCCGGCCAGCTTAGAATCCACTCACGCCCCTGTTCTTGGCGTTT
TGTAGTTTGTTTAAGCTACTTGTGCATCAGCAGACTATTAGGACATGCATGTTAATTAAG
GAATTTTTATGGTGGTTACAGGAGTACCCGTGAAACTCTATGGACACAAGTATCCATCCA
CTCACATTATGACGAAGCATCATCGAAAGGAAAAGAATACAATTATACAAACTGTTGGAA
CATCTTTACAATATATCAATTAGCTTAATTAGCTACCACTAGCATATTCATTAGCTTAAT
TAGATCCCTCATCTCGTCATTTTGTGCTACAACCACTCTTGTTCGCCTAGAGTCGCTCCC
GTGGGCGACCAAGGGACACTAGTAGAAAAAATGACTTTGGTTCTGGCAATTAATGGAAGC
ATCAGTCCAGATTCGAGCGGGACGCCGGCCCGACGTCGGGAACCGGGACTAAAGTCTCGT
TTCCCACTAGTGGGGGGAACCGTAGCCGCCGAGCGAGCCCTTCCCCGACCCTCCTTCCAT
CCTAACCGTCCACTAGTGAAGAAACGAGCATTAGTCCTGGCTGGTAAGGCCTTTAGTCCC
GGGTCACCGATCGAGAATAATAACTTGGGACTAAAGCCCCCCTCTTTAGTCCTAGTTGGC
CACGACCCGGAACTATCACCCTTCCACGTGACTGGCAGCGCGCGGCGGGGGGCGGGAACC
TTCAGTCCCGCTTGGTAACACCAACCGGGACTAAAAGGCACACGTCAGTAGCTGCAAGAT
GCTGCCTTTTTTTCTTGAAAGGAGGGGTTTAGGGGTTTCATATATCGATCACTTGCACCC
ATCCACTTTAATGAAATATTATGTCATATAGCTCATCATCATCTTACTCATCTAACAACT
CATCACCATCTTAATCATGCCAGGTTAAAATATCATAAAACAGAAAAATATCATAATAAT
CATCATCCTAATCGATCATGCCAAGTTAATATAAATCAGAAAAACTTCTCTCTCATAAAA
CCTAGTCCTCTCTCCTAGGTAAAATATCATAAAACAGAATAACACCTATGCCCCCTGATA
AAGCAGAAGATCCAACGGTCTCCAACTTGTGGCTTGTGATCATTCTTTATTTCTCTCCAT
GCTTCAATTTGGAGCCTTCCTTTTGATTTGCGCTCGGTCGAGTATGGAAAATCGAACTGA
ACCCCTATAGGGCTTTTAATTTTCATATGACCTTTGCCATGCATCAATGGAGGCACACCA
TCATTTGGCAGTTTCTGTTGAAAAAACATAATAGTAGCCTAGTTAGTAATGTAATCAATA
TCATTTACGCAATAGTAGTGTACTTAATTAGCAACTCTCATCAAGATATTTGGCGAATGT
CATTCACCCTCAACCTATGCACTAGTGGCATGTAAACTGTATAATTTGGGCCAGTTCCCA
AATTATACGGGAAGTTGTCCCTACCAAACAGGACACGAAGGACACAGTTGATAAGAACAT
CCTTCTCCTTCCAAGTTAGATGTGATTCATAAGTGTAGTGTGTTGTGTCAATTAATTTCC
GTAATTCACTCGAAGAAACGAAATAAGTTGTAAATTATAAATTAACAAATTTAGTATGGA
TGAACACCAACTATATTCAAATATAGAATGCAAATTACTTGACAATTATGGTTGACAAAC
TCAAATGGAGGTTATTTCCATATCGTCCTGAAATCCGGTTGGTGGCTTCAACCAGGACTA
GAGGTTTATTTTTTCTTTTTGGTTTGTTTTGTTTTTTTGAACAGGATAGTTTCTGTTTTT
AGATTTGAAATAACTGTTAGAATATTTATATTTTTTGAATGAATCATTTTGCTCTAGGTC
AAAACAATACAAACTTTCTGTTAGTGCGAGTACTTTTCAAATTGAAATGCTTTAAATTGG
AAATCTTTTGGAATTTATTTGAATATTTATGTGAACAACTTTAGCTTAAAATAGATTTTT
GAGTGATTCTTTTTCCTGCTATTTAATATTAGTGTGTTTTATCAATATATGAAATTTGGT
AAATTTTAGGTTATTTTATATCGGTGTTTTAGTCAAAAACAGATTTTATTTAGCAAAAAA
TCATTAAATGCATGAAAAATAGCAAATGAAGGGTTGGAAATTGATGACATGACTTTGAAT
GTTGCATTTAGAACGCACAAAAAGTATAGAGTCAAAATAAGTTTAAAAATGAAATTCCTT
TGTAACACATGAGTATTCGACCGAAACCTTGATACTTCAAAAGAGATTGTCCAGATTTTA
TATGAAGTGCATCCAGTTTTTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTGATGATACCATGTCAAGTTTCAGCCTTTTCAGA