Map Locations of contig_59125 (4662 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_59125

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71091 1 1361 bp AK357165 Available Available None





CDS Structure of MLOC_71091






Contig Sequence (4662 bp)

>contig_59125 4662 assembly3_WGSMorex_rbca.fasta
ATTTGCTCGTTATCATACTAACCCATCTCACGAAGTTCCAGTACATGCTGTCCTGCTTGA
TCTCGGTCTGGGACCTTAGGGTAGGGAGAGAAGGTGAGTGGAACGGGAGGGGGAGGGTGT
GAGGATGGGGTGGCGGTGGCTAGAGAGAGGGGGTGAGGAGTGGTTAAAGGAAGGGGCAGG
GCGTGAGGGGCGAGGCGAGGCGAGCGACACGAGGACGTGAGACAAAGGCGTAGGGATTAG
CAGCGTTTCGTTAGCAGCTTTTTGTTAGTAGACAGATCCGGTTCTTTTAGCCGATTCTTC
CAGAATCTTGAGAATCAACTACTCGTTTCCTACCGTATAAAAATATGGGCGGATATAACT
AAACGTATTAGTCATCTGATTACGTCATCTAATGGACTACACGTCTGTTTTTTACCGATT
CTATCATAATCTTGAGAATCGATTCTCCATCCAACTTATTCTAGAATTTTGAACCCATAT
TTTTTTACAATCCTAGCTGTTCAGATTATGATAAAATCGGTCAAAATAAATACGCATGTA
GTCCGTTAGATGACGTAATCAGATGACTAATACATTTAGAGCAAGTATAATAGTATAGCG
AGCTGCTGGCTATAAGCGATTATCATGTCATCTATAGCCAATTTTATAGTCAACATGTAC
AATAGTTCATTGCAAAAGTGTACTACTTTTTTTATTATATGGCCTATCTTTCATACTCAC
AAAATGTCTAGGAGTACGTGTTAAAGCTGACCCTTAGCTAAGAACCGCCGACCTTCTCTC
TCCTCTTCTCTTTTCTCTAACTACACAAAAATATATTAATTTATTCTACTTGCTCTTAGT
TATACCTGCCCTTTCATACTTTTATACGAGTAGGAGAGGGGTAGTAGATGAATCGCACGG
ACCCGTCGCGAAGCATCGTATGATGGAGGCCTCGATCGCTTTCTGGCCTGTTCCCCGCTC
GTCCCTAATTTTCTCCCCTCTATTTCTATTTTTTTCTGCGGGTGACCTACCCCTCTGGCT
CCCACACACAATCCCGCAGAAACAATCCAGCCCCCCAAACCCCACCGCCCCGCGGCGGCG
GCGTCGCGATGGAGCCCTCCTCGGCCGGCGCCGGCGGCAACTCGCTGCCGTCGGTCGGCC
CCGACGGGCAGAAGCGGCGCGTGTGCTACTTCTACGACCCGGAGGTGGGCAACTACTACT
ACGGGCAGGGCCACCCGATGAAGCCGCACCGCATCCGCATGACCCACTCGCTGCTGGCGC
AGTACGGCCTCCTCGACCAGATGCAGGTGCTGCGCCCCAACCCCGCCCGCGACCGCGACC
TCTGCCGCTTCCACGCCGACGACTACATCTCCTTCCTCCGCTCCGTCACGCCCGAGACGC
AGCAGGACCAGATCCGGGCCCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCG
ACGGCCTCTACAGCTTCTGCCAGACCTACGCGGGGGCCTCCGTCGGCGGTGCCGTCAAGC
TCAACCACGGTCTCGACATCGCCATCAACTGGTCAGGGGGCCTGCACCATGCTAAGAAGT
GCGAGGCCTCAGGCTTCTGCTACGTCAACGACATCGTACTCGCCATCCTCGAGCTCCTCA
AGCATCACCAGGTGACCTTGCCCCGCCTTGCTCATGCCATTAGGTTTAATATATTTTTAA
ACGGTTCGATTACATCCTCTCGTCTGCAACTGTTTCATTAAGTGAACTAGTTTTCTAACT
TTCATGTCACGTCCATTAGTTATGGAATTAACGATATTGGTTGAACAGATGGTAAGCAGA
AAGGGATAAACTACCGGAATGCCTAATATATGTTGATGCAATAAACTGTTTTTGCTAGCT
TTTATCCCAAGAGGTCCCAAATGAGACCATGTCATGTCATATTCCTGTATACTACTGTTT
AGTGGCATATAGTTATTTTGAATATTTATTTGATTGTAAATATTCAGAGTGATTCAGTGG
CAACTAATTCCAAATAGAGGAATGGTTGATGCATTCAGGAAGTGTTTGGTTCAGAAAGGC
TAACTTAAATAGATTGCGATGGCATTAACGGTGTAATGGCGCCATTGTCCATTTTGTTTA
GCTCCATCCAGTGACGGTATCTGGTTGCAATACGGGGTTTGAGTGTTCTTAGTAGTCTGG
ATAAATCAGAAACCAAGAACATATCAATGCCATGACCAACACAATCATGAACCAATCAGC
TTAAGAAATGCGAAATTCATCAAGAATTGAAGGGAAGGCCATGGTAATCAAGAGGACAGA
GGAGAAGGGCGGAGTAGAGATCTGAAGAAGGTGCTCCAAATGCGGTGAAGGGGATCGGCA
GCCGATGCTGCTCCTTCAGGATGCCGCTGCTGGTGATGCAGAGCATGTTGGGCGGGATGG
ATGTCTCAACCATGGGTGGCGTGGCCGGGGCAGGGCTGGGGCGTCACTGTTTTGGGCGGA
GGGATCTGGGGCTGAGGAGACTGGGGGAGGAAGACAGGAGTTCCACGAAGGAGATGATGA
AGCGCTAACGTGAATCGTTACCGGTGGGTTGTGGGTAGAACGGGCCTTGTGCTGCGGGAA
CCAAACGTGTTTATCGGTATTAGATCGCGCTGTAATCTGATAACAAAAAAAAAACCCGAA
CCAAACACCTCCTCAGTGTCCTTGTTTCCTGAGTTTCCTCTTGCTACTAGGAATTTGGAT
ACCAGCCAGATGTTTCGTCCTTTAGGTCAAGGTTTTTTTATTGTGCTAATATTGTCTGTC
TTAATATCTGCAGCGAGTTCTATATGTTGATATTGATATCCACCATGGTGACGGAGTTGA
GGAGGCATTCTATACAACAGACAGGGTTATGACGGTCTCATTCCACAAGTTTGGGGATTA
TTTCCCAGGCACAGGGGATGTCCGTGATATTGGGCATTCAAAAGGAAAGTATTACTCCCT
TAATGTCCCTTTGGATGATGGGATTGATGATGAAAGCTACCAGTCCCTGTTTAAGCCTAT
AATGGCCAAAGTTATGGAGGTTTTCCAGCCTGGTGCAGTTGTTCTTCAATGCGGCGCCGA
TTCGTTATCTGGGGATAGGTTGGGTTGCTTCAATCTTTCGATCAGAGGTCATGCAGAATG
CGTGAAGTACATGAGGTCTTTCAATGTTCCATTGTTGCTTCTTGGCGGTGGTGGCTATAC
CATAAGAAATGTCGCACGTTGTTGGTGTTATGAGGTATGGTAAAAAAACTTATCTTCTTT
CTTTGGCCTCTTCTGCCATGATTATGCTTGTAATTGTTACCTATTGGAACTATACGTGTT
TTTATTGCTGTGCATTTTGATGCCATCCTGTTTGCTTCATCTGGCACTTTTAAACTTCGT
GCAGACTGGAGTTGCACTTGGCCAAGAGCTCGAGGATAAGATGCCTGTCAATGAGTACTA
TGAATACTTTGGTCCAGATTACACTCTTCATGTAGCACCAAGTAACATGGAGAACAAAAA
TACACACTACGAACTGGATAATATAAGAAGCAAACTTCTTGACAATCTTTCAAAACTCAG
GCATGCCCCTAGCGTCCAGTTTCAAGAGCGACCTCCTGATACTGAGTTCCCTGAGGTAAG
CAACTGTTCTTGCATTATAAGAAGGAATTCAACTTCTGTGTCCCTTTTCTTTACTCTTAA
CAATAAGAGGACGAGGAGTTTCTGATGTAGTCATTGAAAATCTCCCTTCATTGCTAAAAA
CAAAACCTCCCTTCATGAGCACCATTTCTCTGGTAAGCAGCATGGAGGGATGGTGCCTGC
TAGTACATGCAAATTCCTGTAAATATAATATTAGAATAAGAAACAGTAGCTAACATTCTG
TGATAGTATCTTCATGTTAGTTTCAAGTTGACAAAATCTGGAAAACTGGAAAGGTAATGG
GATCAGGATCCCTTTTGTTTTTTTACAACTGATGAATTAGCACTGAGTTTCCTATTCTTA
TCTTATCTTACCTACTAATAAAGCAAATATTGCTTCTGCCGTACGTCATTTAAATTGTCC
CTAAAGTTGGCTAAAATTACCCACCAATGCCACTCATAGAAAACGTTTCAAACAGAAAAA
TCTCCAGACTGGGCCGGCCCATGTAGGCACCTCCTATATTACGCTCTGGGCATTAGAAAA
AGATGCAGCACATCCGTTTGGACCGGCCCATGCGTGGGCGCCTGTTTTTTTTAGTTTAGT
TTTTAATTTTTCTTTTCAGTTCCATTTTGTTTTTCTACTTTAAATAATTTAGAACTTCAA
ATAACTTTTCTCAATTTTAAATAACTGGGAATTTCGAAATAAAATATTCAAAAAAACATA
ATTTTTTTGAGAATTCAAAAACTACTNNNNNNNNNNNNNNNNNNNTTGCATATACAAAAA
AATGTTTAAATTTTGGGAAAATGTCCATAAAATAAAAAAAGTCAATGATTTTAAACAAAA
GTCTGTGTAAAAATCTTAAAAACAGTTCGTGCCTCTGTTTTTAGTCTCGTTTTTTATTTT
CATTTTTCTGTCCCATTTTCTAATTTAAATAATTTAGAACTTTGAAAAACTTTTGCAATT
TATAAAAATTAGAATTAGAAATAAATTTTTGAAGAAAACATAAAATGTTTGTGAGTTCAA
AAAATGCTTGGGATTTTTGTAAAAATATTCGCATATTCAGAA