| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_59051
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_71054 |
5 |
1159 bp |
MLOC_71054.5 |
Available |
Available |
LOC_Os01g62040.1, FRAME:-2, EVALUE:8e-63, 13101.m06631 protein ruvB-like, putative, expressed |
| MLOC_71053 |
2 |
1459 bp |
MLOC_71053.1 |
Available |
Available |
LOC_Os03g50030.1, FRAME:-2, EVALUE:3e-59, 13103.m05439 protein phospholipase A2, putative, expressed |
CDS Structure of MLOC_71054
CDS Structure of MLOC_71053
Contig Sequence (5799 bp)
>contig_59051 5799 assembly3_WGSMorex_rbca.fasta
GCGGGTGGGAAACGATTCCCTATTTTTTTCTATTCTTGATTGAGTCCTTTAGATGTGCAA
TAACTAAAATAAATCTAGATATGTCCAGGATAAAAAAAATACTGTAGGGCCAATAATCAT
ATCAACAAGCTGTAATAGGGTAGTAGGAGTACCAATTATGCAGTCCACGGACACATGATG
TGTAGGCAAAAGACGTACCAACTCATGTAAATTTAATCAGGCAGGTGATGGTAATCATCA
TGCCCATATACAATTCAGAGCCGTCGATCTTAGCTAAAGTATCAAACCAGGTCATTCCCG
TGCGAGACTGTACGTACGTGAGGCGCTGGCGCGGCCGGTGCGCGCCAGGACGAACACCCA
CCGCCAGTGAGCGACACCAAGCAGAAAAGGCATGCACCACCCACCTACCGAGCAAGCTGT
TGCTTGTCCCCCCAGCTCGCCGGCTCCCCGCGCGCGCCGCCGTGGTGCGCGATTTAGCTA
GCTAGGGCTTGTGCAGCACCCGGCCGGCGACGACGGCGGCCTCGATGACGACGGTGATCA
CGTCGATGACCTCGTCGATCATGCACTTGTTCCCCTCGAAGGTGCCCGTGCCGTCCCGCA
GCTCCGCCAGGCACTCCAGCAGGCCCTCGTTGCACTCCGTGCTCAGGTAGTCATCTGATG
CCGATCGAGAGTCAGACTCAGACATCGGCTACGTAAATACTAGTTGATGGATGGATGGAT
TGGTTGTTGGGGGCACGTACTCTTGACGAGGACGCAGTTGTCGTGGTGCATGCAGCAGGC
GTCGAGGGCGTCGCACGGGCGCTCGCCGGGGCACCCGCTGTAGAGGATGCCGCAGTACTT
GCCGTACCGCAGGAAAGGCGCCGCTGCGTCAAGAGATCACCAGTCACCATGCAGTTACTA
CTACCAACGAAGAAGAAGAAGAAGAAGAAGAAGTTGATGCGCCTACGTACTCGTGCAGTG
GTCGGACTCGCACGTTCGGCTGCACGCCTGCTGCTTGCTCTGCGTCAGCGTCCCCGCCGG
CCGGCCGCCGAGAAATAGTCGACAAACCATAGCATACTCAGCTTAATAATTGGCTATACG
AAGTGTAGGTTATAGTACATGCGTAGACCGTGCACGTACCACGCCATCGCCGTCGGCGTC
GACGGACTGGAGGCCGACGTTGAGAGCCGAGGAGCGCGGCGCGAAGGCGGCGCAGGCGAG
GAGCCCGACCACCGCGAGTAGACGCGCATGCAGCCGCCGGCAACTGCCTCTGCCATGCGC
CATCCTCTTCAAGAAAGATCAGATCTCTCTCTCTCTCTCTCTTTGTGTCGATCGAGACGG
CGGCCGCCAGCAGCTGGACTTATACCGCGCGCCCTGCCCTGCCGTCGTTCTCGGCGAGAT
AAGATATTATCTAGTAGGGAGATCCAGCGGAGGGGCACATTGGCTGGAGCGACGAGGTGA
ACTCTGCAACTGTAGTTGGCAAGTTGTGACACTGATTTAGAGAGAGAAAAGGGAGGTGAA
GATGGGGCGCGGGTGCGCGTTTTGGTTGTATGCCGCTCGTGAGCGCGCGGGGCTTGTTGG
CTAGCTCACGGGGACACGGGCTGGCAGTCGACAGCGCGGAGGAAGATGCCGTGCATGCAC
CACGTCGGTCGGTGGGCGATCCAGACGGCGAGCATGTGTGCCATGCATCCAGCGCCTTCT
CCTCCTTTTCCTTTTTCCGTGGTCTCTTTCGACGAAAATAATTGGGTGATTGGGTCGTGG
ACAGACCCAGATTTTTCAGTGAACCGTGAGAGTGAGCGAGTACGCTTTATAATTATCGGC
TGTCAGCTCAGTTGGTTGCTAGTGTCCTCTCGTGTCGACTCTTGCCGCCATGTTCGTAGC
GTGCCTTTTTCATTGGGTCATATGTCCCATATATATGGGCGACCCATGATAATTGAGCTC
CACCAGTTGGTCGGATATCGGACATTATGGAAAAATATGCCAATTAAGAGCATCTCCAAA
GGCGGACCGTCCGACTGCGGTGTCTGAACCGTGGAAGTCATCCAACGCTTGTACCAACCC
ACGACAAAGTTCGGACGCAATTTCTTCTACAAATCAAACACAAAGTGATGGGGGGGAGGG
ATGCGGTAGTCCGGAAACGAGAAACGTTGCTATCCATCATCCCTGCCCCCAAATACTTTC
TAGACCCGTGACTTTCATCCTCCTTATTTTTTCTCCTTCCTTCTATCTCTCTTGCCTTCG
CCGTCGCTTCACCACCCCCGCCACCATGCCACGCCCTTGTCAGAACCCCGCGTCTCCGTC
ATCCTCCAATGCTCCGGCTGGGCTCCCCGCCGTTTCTTCTCCGTCTCCGTTCAATCCCTG
TCCTCCGACCGTTCCAACATTCTCCACCTTCATCTTTTCACGTTTCACTTTGGTCTTTTT
CCTTGGCCACATAATAATAATAAAAAACATGAAGACGCTCACGTGGTTGCACGACTTACA
TTAAGCATCGAAAAAAACATATGTACCAACCAACCGCATCATTCAGTTTTTTTGTTGAAT
ACTGCTATTACTAGAAGGAAAAGCAGATGGTTCCTCCCTCCATTATGGAAGCCTCAACAT
GTGAAATGGACAACACGTTCCTCGGCCGCATAATAATAATAAAAAACCATGAAGACGCTC
ACGTCGTTGCACGGCTCACATTGAGCACAGGAAAAAAACATATGTACCGGTCAACCGCAT
CATCCAGTTCCTTTGTTGGCTACGGCTACTACTACAAGGAAAAGCAGATGGTTTCTCCCT
CCACTATGGTGGGCTCGGTATGTGAAATGGACAACACGTTCCTCGATCGCATAATAATAA
TAATAAAAACCATGAAGACGCTCACGTCGTTGCACGGCTCACATTGAGCACCGAAAAAAA
ACATATGTACCGGTCAACCGCATCATCCAGTTCCTTTGTTGGCTACTGCTACTACTAAAA
GGAAAAGCAGATGGTTTCTCCCTCCACTATGGTGGCCTCAACATGTGAAATGGACAACAC
GTTCCTTGGACGCATAATAATAAAAGAAACATGGAGACCCTCACGTCGTTGCCCGGCTCA
CATTGAGCACCGGAATAAAACATATGTACCGGTCAACTGCATCATTCAGTTTCTTTGTTG
GCTACTGCTACTACTAGAGGGAAAAACATATGGTTCCTTCCTCCATTATGATGGCATCAG
CATGTGAAATGGACAACACGTTCCTCGGCCGCATAATAATAATAAAAAACATGAAGACGC
TCACGTTGTTGCACGGCTCACAGTGAGCACCGAAAAAAACATATGTACCGACTAACCCCA
TCATCCAAGTCCTTTGTTGGCCACTGCTACTATTAGAAGGAAAAGCGGATGGTTTCTTCA
CTATGATGGCCTCAGCAGCATGTGAAATGGACAACACAGCCGTCGACGGCGACGATAAAG
GATTCTCCGCATCGCCGTCGGCCAAAGGCGCGCTAGTCAATGGAAAAGGCGCACTCCTAC
ATGACTGGTTTCTCTTCTCTCTCTTTTTTCCGAATGGTTTCTCTTTTCTTTTCAGCTGCC
ATGCATGCGTGAGATCGATCGTTCGTGTGGATTGGTGATGGTTTCGACTTGTTTTTGCTG
TGACGGAATTCCGTCCGGCACCAGCTCGATCCCCGCCCCCGGTGATCTCGACCCTTGATC
CCCGATTCCCCGGCGATCTCGGCGACCCTTGATCCCCGATTCCCCGGCGATCTCGGCCGC
TCTCGCTTTCTCAGCACATGTTTTCTTTGGCATCCTATACCCTAGCCCGGCCGACGGGAA
CCATGTCATGCGTCCGAATTGGATTAACGCTTGGTGGAATGTTGTTTGTGGACAGGAGCC
GGGTGAGCGCCCGGTTATTCGCTGTAGATCCCCGTAGGCGGATAGGATCGTCCGGTTCTT
GCGTGGTTAAGGAGCGGGGCAAGAAAGCGAAACCGATGCCAAAGTTGAGACTGTCGGAGA
GCAGTCATGTCGCCTGTATGGTTCTCCATGTAAGGCAGCACCTTACATGGATCAGGATTA
ATTCTCGTCTACCAGCAAAACCATGACAGATAAGCTTCACTCCTTGAGCGAATCCACACA
CGTTTGTTTAGCTTGCACGCGTTCCACACGGCCCAGTTTGTATTTGCCTGACGCGAATCT
ACACTAGATGTATTAATGATCTATAATTAGTTTAAACTTTAAAGACACAAGGTGGACTTT
ACAGCATAACCCCAATACGTTATCGAGCAAGTAAGCAAAGGCAATGCTCCAGAAATTGGG
TCGGTCTTACCACGAGACACAATCCAACAAATCCCACTTCACCGCAAAAGAATCAACGAC
CGATACATCTGAGGCGACCGTACACCAGAATCGATTTTGTCCAGTCCAGAGTGCAGCTGC
TACGAAAACAACGCTCTGATTGTGCTCTTCAAGTCTATGCGCCTGCTTACAGGCCAATCA
CCTGAGCCGACAGCTGAGAATCCTTGTGCACGACTAGTTTAGGTGATGTATCTTCCTTGC
TGATCCTGAAGCCAACGAGCAGAGGACTTCGCGTCCAAATACAGACCACGAACTTCCTTG
AGATCAGCCTGATATAGGATCATGAGATCAGGTTAGGAAGATGACATTTTATTGAAATTC
AACACATACCTTGCAGATCTTCTCTCTCCCATTAGCCTTGGCAACTACGCTAGCAGGCGA
CAGCAACTGAATAGCATGTCTGCAAAGAGATTGAAGATCCATTGCAACCGTTACAACCAA
CAATAAACTGGCCTAGTTATGACAAACCCGGTGATGGTAATGCGTACGCTAGACATACAT
GCATGTCGAAATTCACATAGCAGGACACTAAAAGTGGGATGAAAGCCAAAAGACAGCGTT
GAAACAGTCCTAACTTCAAAGGCTCGAGAAAGCTCTTTCAACCCACATTCCAGCTAAATT
TTATTTAATTTCTAATTTCTAATCTTGGCACGGGACACAAATGTGTCCAAAACAACAAGA
ACCATACCTCAAAGATGTCTGCTGTCCAACCTCTCCTAGAAATGCAAGACTGTCTTCGTC
AATTTCAATCTCCTCCACTTGTAAAATATCTGCAACACACAGTAAACAAACATCAAATGC
ATTTCTAAATAGGAAAGTTGAACATATGATAAGACAAGAAATAGGAACCTGGATCATCTC
AATAGGGCCATATATCTATGTCCGTATGATAACCAACCTATCTAGAAGGTCGACTGGGAT
ACCATGTGGGCTTGTCATGTCAGTTCCCCTGGATAAATAGAGTTGTAAAATCATAATAAG
TGCAAGGAAAAAATAGTACTAGATAAAGCACCCACTACAATGACCCCTAAGCGCCTACAG
CAGGCATAATTGAAATGTATTGCCAGGGATTCCGATGTTGAAATGTGCTGCCATAATTGA
AAGGCATAATTGAAAGGTGCTGCCAGGAATTCCAGTATTGCAGTTCAGCATGGAGCAGTT
GAACAGGTAAATCAAATTTCTTACCTTACAGTACATATTCCTCTGTTCGTAGCGAGTATC
ACAATTGGCAATAATGAGCTGTCAAGAGCACGATTAAGATAAGAGAAGGACTCAATGTCC
AGCATGTGAACCTACAGATAAAGTTATTGTCATTAATGAAATCAGGTCACTATAAGGCAT
AATTCTACCATTTAGTAGCATGAAGGCCAATTAGTTCATCAGAACAATGCTGCTCCACAA
GGGGGACACATTTATTTGGCAATAGGAGAAGTTGAAAATAAATAAGCCCAAGCTCATTCA
CATTTTAGGAAATCCAAAACAAGCATACCAAGACAAGTA
