Contig Data
morexGenes
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Map Locations of contig_59029 (4201 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_59029

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71041 1 1597 bp MLOC_71041.1 Available Available LOC_Os05g35500.1, FRAME:+2, EVALUE:2e-123, 13105.m03718 protein MYB family transcription factor, putative, expressed





CDS Structure of MLOC_71041






Contig Sequence (4201 bp)

>contig_59029 4201 assembly3_WGSMorex_rbca.fasta
GTCTATTATTGAAATGCACGTAAATTAAACCATGTTTTCTAAACCGTGACGGAGGGAGTA
TATTACTAGGCTCGTTTTAAGTCTAACTGAGTTAAAGTGCTTTGAGTCTCACGCCACATT
TAATTCATATTGATAAGATAAAGGAATTAATGGCTATGCATGCATATTTTTCTACATGCA
TTATGCAAGTGTAATAAAAAAAGAATACTATATTTATTGCCTAAAAAATTAAATATGCAT
ATTTTTCTACATGCATTATGCAAGTGTAATAAAAAAAGAATACTATATTTATTGCCTAAA
AAATTAAATATGTGAGAAATATTTTATTGACTACTAGTTAAAATTAGTATCATCCATTAC
AATTCAATTTGGTTGATGAAAATTTATATTTAAGCCCTATAAACAAAAAATGGAGTAGTT
CTGGTGTGTGGGCTTTGCGTACGGCGTTCACACTTTGAATGACAGGTCACGTCGCACCTA
CCAGTTTTAACTCGCTGCATCAGGGATCGTTTTCGTTTTTATGGTGCGCCTGCTGTTACG
TTCACGCGCACGTGCCGGTTACTTTACACAACAGGGTAACCTTTTTATTTGGCAGATTTT
TAATTAAAAAAAACTTTTTATTTGGTGAGAAAATCTATTTTTCTCTTCAGATCTGGCGGG
AAACCCTTAGCCTTGGGTCATGCAGCCTATCAAGCGCATGCAGTCATTTGTTTTAAAAAA
TATATTTTTTAATTCTTTTGCGGAAAGCATGCAGTCAGTGTTGCTGCCACTTTATGTCCC
GCGTCGTCGCAGCATGTTGAGCGCACCGTGAGCGGAGACGACAAGTTGCAGCAGCACGAC
CGATCGATCGCTTGCCCAACCCATACATACCCTGCTCCTAGCTGCATACACCCACGAGCC
ACGAGCCACGAGCATCTTGCTTGCGGCCGGTGACCGCAGGCCCGATCGACCGCGCCGGGG
ATCCCAGCCGCTGACCCGCTTTACGCCCATCCTTTTCGCCCCGGTCGGATTCAATCCATC
CATCTACTCCTAGTACTCTACTCTACTTGCCATTTGCCAACGGCGGCCCGTGTTCCGCAT
GACATGTACGTGCAGCGCCTAGCTCGCGAGGGTGAAAAACGCGGTGCCGTCGTGCAGCTC
CCTTTCCAGCCTGGCCCTGGACACGATCACACGACCAATTCCTGCGGGTGTGAGCTTCTC
ACCAGTAGCACAGCCCGCTGCGTCTGATCGGGCACGCTCGGAAACCCTCACTCACTCCAT
GCACACGACGGTACGTCGCCAGGCCCGATTCACCGGGGCCGGTCGCCAGTGGACCCGACC
CGATACGACCAAAAGCGGTTCCCAACGAAAAGGGGAGCCCGGCATGTTAGCTTTGACCCT
GGGGGCCGCGCGGCTTTGCCGGATTCTTTATCGGATCCGAGCCGAGCTGCCTAGCCCACC
CATGCACCAAACTCGACCTGCCTAAACTCGTAGTAGTACTACTAACCAGAATACCAGATG
CACGTCACCTAACCGCAACCGGACGGAGTCCTAAATTATTGCGACCTTCTAGAGGGTTTC
GCACCTACTGCTCGTAAAGTTGGCCCGATCCGTGTCACGGTTGGTTCTTTTGTTTTGTTC
CTTCCATCGCTTCGACCGGATTTTGCTGCAGCAACAGGGGCTAGCTGTGGTTGAGCGGAA
TTCCGGAGATTCTCGTCCCTGCTCGACCCCTTTCAGGTCATGGCTCCTCGAATTGACGTG
GTAGGAGTACTACTACTAGCGCCGTTCCTTTTGCATTTATGGGGTTTCGTTGCAAGTACT
GAACTCTACTGTCTGCCAGTCAATGGATTCTGCCTGCCTTTCGACCCATCCATCCATCCA
TCCAACGAGTAGGACTACCAACTTGTACCGATCGTAGCTCATAAAGAGGAGCGAGCGAAC
ATCCAACCGTACCCGCACCTTGCAGCGACGTCCGTGAATGTGATTTAAAATTTAAATCCA
CCCCCACCCAACTCTGCCTACTACCAAACTCAAGCTCAAGTGCAGCGGTACGTGCCAAGT
ACGCGCGGGGCGGGAACAAAAAACACGCGGGCTCCACCGCCGCAACCGCACCGCCTCCGC
CCCGCCCGCAACCACCACCCAACCCAACCCAACCCAACCCACTACTCCATGCAGCCGAGT
CAATGCGCGCGGAGACAGAAAAAAGGCGCGCAACCAACACACAGCGCGCCCTCACACGCC
ATATATACCGCTCCGCCTCCGCTCTGCTCGGCTGAGTTGCGACTGCGAGAGAGAAGCTAG
CTGGTAGGAGGAGCTAGGATCGAATCGGATCGACCGGCATGGGGAGGTCGCCGTGCTGCG
AGAAGGAGCACACCAACAAGGGGGCGTGGACCAAGGAGGAGGACCAGCGGCTGATCGCCT
ACATCAGGGCCAACGGCGAGGGCTGCTGGCGCTCGCTGCCCAAGGCGGCGGGCCTGCTGC
GCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCGACCTCAAGCGCG
GCAACTTCACCGACGACGAGGACGAGCTCATCATCCGCCTCCACAGCCTACTCGGCAACA
AGTAAGCCGCCGACATCGCCAACACTCTTCTTGCTGCAATCGCGCGCTCTTCTTGGTTCT
TGCTACGACCATGGCTGCTTCTTATCTACTGTAACTGTAGTATGTTTGCTGACCACGGGA
ATGCTCGCTCGTCTCGTGCAGGTGGTCTCTCATCGCCGGCCAGCTGCCGGGCAGGACGGA
CAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTCTCCCGCGGCAT
GGACCCGCACACGCACCGCCCGCTCACGGCCGTCATCGACGCCGCCGCGCCGACCCGCCC
GGCACAGAGCGCCGGCCGGGGGGGGGGGGCGCCCACCACGATGTTCGCCCTGCCAACCAA
ACAGCAGCAGCCGCCGGTGCCGGTCGAGTCGTCGGACGACGACGGCAGCAGCGGCGCGAC
GAGCACCGGGGAGCCACGGTGCCCCGACCTCAACCTCGACCTGTCCGTGGGCCCGCCGGC
GGCCGACACGCCGACGTCGCACCCGGTCTGCCTCTGCCGCCACCTCGGCTTCCGCGGCGG
GGAGGCGTGCAGCTGCCGGCAGGCCGACAGCGCGGGCTCCCAGGGCGGCGGCTTTAGATA
TTTCAGGCCGTTGGAGGAGGGCCAGTACATATGAGAGACGACGGGACGGCTAGGCCCTAG
AACTCCACAGCAATTTGTAAGACAGGGAAATTTTTCTACTTACTCCTCCTCCAGTCCACA
GCACCTAGCGCTGCTGGCTGGCTCACAAAACGGTGAAAACAAAATCTAATCTGTTCATAT
CCTTCCTTGTACGCCAAAACCGCGAATTTGTCCGCTCTCTTTTGTTGTTGGTTGGTGCTG
TTGCGTTGGGTGGGAAAAACCAGGGGATAATGTGACAAAGGTTGGTGTGTATTTTGTGGA
AAAAGGGAGGGCCTGATGTGAGGCAGCGACCACATTATTGTTTCCGGCATCAGATTCTGG
TGTTCCTTTCCTATGCAGTTTTGGTCATGTGGATGCTGCGCAAGGACATCATGTGGTGTG
GGTTTTTTTAGGTATTTCAGCTAGTCCAGGTTTGCACTCCACGAATTCTTGGTGCAACTT
GAAATAGCTGGGAGTTTGGCACGGAGGGTACTCGTACGGCCAAACTATGAGATCCTATTT
TCAGGTTTTTGTATTTCAAGGAGATGCATATTTTTTGACTTCTAAACTTTTTGTTTGGTT
TGATGTTGTGTACATCACTTAATACATAGGTCATGGCGGGATCGGAGCCACAAATACAAC
GTAAGGGAAGCCAATTGCGCACAAAATATGTTGGAAGGGGTCACATAGGTAAATTTAAGT
AAATTTGGGGTTAAAATTATAAATTAATAAGGGGGTCCTCATCATGGGATTTGGGGAGGG
GGATGCATGAAGAGTTATTGCCCAAATCTCAACCACCTGCGGCCAGTTGACGCAACTTCA
ACTTTGAAGGTCAAAATCAGGCACGGTTAACGCCACGGAAGATCACCAAACGGTCTACCT
GCAACCAGTAATCGTATACCACAGGACCTGCCGCCGCAGCTTCGACTCCATAGCAACAAA
CAAACCGAGGCAAAAATCGTGGACACGCCGAAAAAGAGCCGACTACCGCAATCATTGCCG
C