Map Locations of contig_58995 (6207 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_58995

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71031 5 877 bp MLOC_71031.2 Available Available LOC_Os11g02110.1, FRAME:-3, EVALUE:3e-32, 13111.m00131 protein expressed protein





CDS Structure of MLOC_71031






Contig Sequence (6207 bp)

>contig_58995 6207 assembly3_WGSMorex_rbca.fasta
GGAGGAGGCACCAGAACTGGGCGGCGCCGGCAACGAGGTTAGGAGCGAGGCGAGGGCGAG
CTGCCAGGGCTGTCAGTAGGGGTGGAGGACGACCAATGTGCCACCGAATGGCGGACCAAG
GATCGAGAAAGCGGGCGTCGTCCGTGTCCGCTTTGTGTCCGCACCGACCCAAATCAGGCT
CGAAATTGGGCCGAGAATGGGTCGGCAGGTGGACAAAAAGTGGACGGATATACGTTTGGG
TCGACGCGTTGGACCGTTTTTTCTGTCTGCGCAAATCCGAACAGACGGCGACGGACGAAA
TGGATCGCCCCGTTAGAGTTGCTCCCCGTTAGAGTTGCTCTAACACCCATGCTTCTTCTG
CTCAGTCTTGATGCCAACAATTTGAAAGCGATCTTAGGCGCAGTATGGCGCGCGTCATGC
TTCTTAGGAATCGGCGTACCTAGGGCCTGATTTAACCTTCTAAAACCCCTTTCATTGTTG
AGGAATAAGCTTTTTTTTTTTTTGGATGGAAAACACTAACTTTATTAATCAAACTTCACA
TTCGGTGGGATAAAAAAGGATCATGAGGGTGGAGCAACCACGCATGTCGCCCCTGATCCA
AAGAGTACGAGAACTTAACTAGTCTATTGACATCTATATTAGCTTCTCTATCTTCAAAGG
TAATTTTACAATTAAAAGAAGAGGCCAGAGCAGAAATCTCTCTTAGGATCGGCCCCTACA
AACCATCAGCTCCCAGGTTTGCAAAGCAATAATGATGTCGTGCAAATGAAGGTCCTCTGC
CAGAGCCAGTCCTTCTCTGATTGACATAGTCTTCATTGCCGCGACGTTCGTGCCACCATG
TAAAACCAAAGCCAAAGTTGAGTCACTTTGTACTAACTTTAATACAAAGTTGAGTCATTT
TTAAGTCACTTATTTTGGAACGAAGGAAGTATTCTTTATGAGATTCATACCTTCTATTTA
TATTTAATCATTTATGGATGCAATACGAGCAATGGATATATTTCAGAATATATGTATATC
ATCAATATCGAGAACTCGAGAATGCAAGGTAGCATTCCAGTACAAAAGTTGGTAAGAGTT
GGTTTTCTGAATGAGTACAAACACACCAGTTTTTTTTCTCGAAACGGAAACACACCGGTT
AATTGATTCTGTACCAGAGAGATCACGACTAGGAAAAAAATCCAACGGAGAAGAGAACAG
GGCGAACACTTTGTAGCATCATAGTGACTAAGAAATATTACAGATGGCTACATTGATACC
TTTACAGTCACAACCTATGATCTTCATCCAGTTTTCGGTCAAGAAATTTCCTATATATAA
AAAAGGAAGAAACGCTCCATAGCATTATAGTTGCAGGCACCGGACAAAATCATGACCGAT
GAATGTTACGAATGGCTGCATTTATACTTTTACAGTCAAAATCCATGATCTTCATCCAGT
TTTCAAAGTCTCCAATTTCCTATAAAAACAATCATGAATGGATGTTTTAGAATAACGAGT
GCACATAGCTGCGAAAAACAATTATGTGGTTTGTTCAGCACTGCACCTTTCAATTTATTA
AGTATCTACTCCCTCTGTTCCGAAATACATGTTGTTGGGAAGAACTAGATTAGTTCTCCC
CAACAAGTATTGTGGTACAGAGGGAGTAGTTATCATCTTGAGCTTAGTGTTATCCACCGA
TGATAATTTTGGGGCAAAAGAGCCAACCAGATTAAAAAAACTATTTATGGCATTTCACCT
TTCTAGATTCGTGCACTACTCAGTTTAAGGGTAGGATTTTGTTTTACTGCAGGCAAAGGT
TATGTAAGGAAAACATTACAAGATACTCCCTCCGATCCAAATTAATTTTGTTTATTTTGG
ATCGTCAGCTACATTATTTATGTCAATTAGGATCCCCTATTGAACTGTCGCAACGAATAT
CATGGGTAATGCCGAACAAAAGAATCATCGGTTCAAAGCAAAAAAGAATCATACATCCAT
TTTGCGGATAATAATAATGTTTCAACGGATATCATGGTAATGAGAAACAAAACATGTGAT
TAGGCAAATCCATTTTGTAACAATAATAACACAGGGTGTTTGGTTCACGTTGTTTTGCCC
GTAATCTGATTACAGTGTCATCTAAAACCCTTACCCGTGTTTGGTTATTTTGGAACGTAA
TCACATACTACCACGTAAACGAATCCCAGGGCGACTCTCGACTGATACCGCCCGAGTAAA
ATGCATCTTTGGTCCTTAAAGTTGTTGGCGATGTCTACAATGGTCCCCAAACTCACAAAC
CGATTTAATACACTCCTGAAACTTTTAAATACGGGCTCAGTTTGGTCCTCGAAGTTGTCA
AACCGGTCCTGGGCTACGGCTAGAGTACGTCTCGCGTATGCCCAGCTTACCGCATCGGCC
ACGTCAGTTTAGGTTGTCTCAGGAAAAAAACACACGCCAGCTTAGGAGTAGTTTGCGGGC
ATCCGACGCAAGTTGTGGGCATATTCAGTTATTCCAATTGCAGTTGAAACTTTGCGATCA
GGTTGTGGCGGCGTTCGCCGATCATCGACGACAAGACCGGCCGGTACCTGCGCCCACCAA
GTTCACGGAATAGCTGACCATCAAGTTCACTAATCTGACATGCATAATACTGACAAATAC
ATAGCCTGATATTCATTCACAAGTTCAGAACTAGCCACTGCTCAACTTTGCCCAGAACAT
GGCTGTTTCTGTGCACGGGCGTCAGGTCGATGCCCAACTCTCGACGGTAGGCAGCAGGAT
CACCATCACGGATGGCAGAGCACCCACCACTGGTCGATGGCAGCTAAAAGTACGGCCGGC
ATCACTGCATCACTGCCATATCCCCAAATGCCGTCGTCATCAGCACACGTCGACGTTATC
ATGCCTGCAACACATCCACAGCGAACGTGCGCGCGAGGCACATAGCCATACCTCCTGCGC
GCAAGCTCCGGCTTGAGACACCGACGGCGACCACAGGAGCGGAGCCGATGACACCCTCAC
CATTGATGGAGAACTCGCTCTTGCTGCCCATGCTGAGGGAAAGTGGGGATTCGAGTTAGG
GATTTCGGGAGGGAATCGGCGCCGCGAGACAGTTAATCGGCTGGCCCTGGGCCCTATACT
GACGTGGCGGGCGTGACGTACACCACACGTACGCGTTGTCGTAGCACAGGACCAGCTTGC
CGAGATTAAGGACTGTACTGAGCCTGTATTTGCAAGTTCCAGGATTGTATTGAATCAGTT
TGTGAGTTTGGGACCATTGTAGACATGACCAACAATTTGAAGGACCAAAGATGCAGTCGA
TACCAGACTGAGCCCATTCTTCCCCTCGCGAAAGGACTCCTCTTCTTCCCCTCGATCTCT
CTACATAGGCAAGATCTTCAACACGTGTGGCAGGAGGCTGAGGCGCCTGTGGTCACATGG
GACGCGACAGCAACTGACCCGGTTGGACCTGGGCGGCTCTACGCTGCGGCGTCGCTCAAT
CTGGTGGCGGTGCATGAGGACGCCACAGCGGCCGTGGGGAGGCGGAGAGCACCAGCAGCT
GCACAGAGCCGGCATAGGGAGGTTGGAGGATTCAGGGTAGAAGGGGAGCGAGATGCAGCA
GGAGGACCTCGACGGCCAGCCACAGAGGAGCTCCGGCAAGGACGATGGCTGCTAGTGCAT
GAACTGCGTGGGCGTGGCAGAGTCGAAGCAGCAGAAAAAACTCACCGGCGAACTGTATTG
TGTACGCTCCCTCGCCTCTACCTCAGCCTCCTGCTTAGATTTGTTCCTGATTGATTCTAT
TCTTGGATTTTAGCCCACTGCTTGCAAGGGTTGTTGTACAGATAAATTTTCTCCAATTTC
TCGAACCAAACACTGTACTCCGTAAAGGCATACCATTTACGTTGACAAAACAAACAAAGT
TCATTTCTCCTCATTCTGTTTACATTGCCAGCGCAATCTGAATTCGTTACCATTTGCGTT
ACCAATTTCTGAAACAAACACCTCCGTAATAATAATGTCAAAACGTGCGTATTAAACAAG
AACACGAGAGAAATGGAGGGCAGCAGCAGAGCATACACACCTTGAGGACCGAGTTGACCG
CGTTGGTGGCGGCGAGCCACTGGTCGCTCTGCTTCCTGTACCGCGCGATGGTCCCGAGTA
GCGCGCGGGCCTCGAGCTCGATGCGCTTCTCGTTGACGAAGAGCTCCTGCACCCCGCCGT
CGACGGCCTCCACGAGATGACCGGCGACCCGCGCCGCGCTCCGCAGGGCGTCCTTCTTCG
CCCTCTCTGCGGCGCGTTGCGTGTGAGATAGTTCAGCAAGAGAAGATTGGATTTGCTCGG
CGGATTAGGAATTTTGGATACATCGTCGGTTTATTGTTACCGGTTTGTTGGCGCTGGCGG
AGGGACTGGTGGTGGTGTTGCTGCATGATGTGGAGGAGCGCCGATTCCAGCCGCCCACCC
GCCGCCGGCCCCGCCGCTGCCTTGGCTCCTTCCATCTTCTCCGATCTGAGCTCTTGCTTA
TTTTATTTTTATTTTTTTGGAGACGACGGACTCTGAGCTCTCGTCTTCCACACCCCGTCA
TCCGACGATACTCTTTGCCAGTTTGTTCTTTGCTACGGGCTACGGCCCATGTAACTTGGT
GGGTACAAATTACAGACATCACACAAATGACTTGGCCCGTCAGTGTCCGCTAGCAGAGAT
TGAAATATAAACAGTACTCCCTCCGTTTTTAAATATAAGTTTTTTTAGAGATTTTACTAG
AGGACTACATACGAAGCAAAATGAATAAATTTATACTTTAAAATATGTTTATATACATCC
GTATGTAATCTTTTAGTGAAACATACAAAAATACTTATATTTAGAAACGAATGGAGTAGT
ATAAAATAAGAGATTGCATCAATTAATTCATATCGGAGGGAGTATAAAAGATCTAACATG
AACACACAATGGGTTCAAATAAAGTCCGGTTATTAGAATGAATAAGATTGGCTAGTATAC
AATAGGATAATCCGATTTATCAATCCACGCTATTCAATATTTTGAATATGGTTATCCATT
TTATTGTGAAATTTAAGCTATTAAATTGTGCCCTTTTCTGTGAGGTGGACATAAATCATC
TGGATTGTAACTACATGTGAATAATCCGTTTTATTGTTTCCACAATCTATCTTGAATGTT
TAATAAGAATAGGAAATTAGGTGTTTACGGCAGTGTTATTTTAGAAGTGTCATGTAAGAT
AAATGTTAAGATAAAGAAAGGAGAAAACATTAAAAAAAACTTGTCTTCTCTTGCTTAAGA
GATAATCTCTTAACAACACCACATATTTAGACACATCCACTTATTGAAGATAAGACTAGA
AAACAACTCGTTCTATAAGGGCATGTGTAGTGGTTGATAAGACAATTTTGTCTTAAGTTT
TGTACGTAATTTGAAGATCACAATAAAAGCATGTTTACAATGGATTATTTCTTAGTCTTA
CCTTCAATAACTAGTTATTTCTTAAAACATGGTGAGATGTATTGTGCTAAGAGATGATTT
CTTAAATAAGAGAAAACAAGCATTTTTTATAATTTCTTTCTCCGCCATCTCAACATTTAT
CATACGTGACATACCTAAGATAGCATCATTATACATGTCCTAACATTACTTATTATCTTC
TCTTGGGATCAAGATAAAATTGTACTAGAAAGCATGCCATTAGAAATCCAATAAGTTGCT
GATTGATCAAGGGAGATTTTGCTTTCTTTTCTAAGAGAGGAAGTGTGATGCTTGTTAAAC
AAAGTTGCGTGTGGGGCTGCCATGTAGTGTTTTATTATAATTTTTACTACCTTTCATTGT
GTTTATGTGTGCTTAATGTGTATAACTAATAATAGTCAATGTATATGTATAGTTTTTAGT
CTTTTTAACATAGTACAGACTTAAGTGTTTATATAAATACGCATACACTCATTCATACGA
ATGCACATACGCACATCCTACCCTCATAAGCACCTTCGAAAAACTAAGCCGAAATATCTT
ACGAAGTCATCATAGGCGCCTCGTCGTCGACCGGGAACGTCTCCTCCCACTGAATGTTTA
TCACCGAAAATCTTAAAATAATAAATCCAGAGATAATACGAGCATTAGGACTTGAATCTT
GGAATTGGAGGAGGAGTCCTCCTCCCCCTTTGGCTGGCACACCCTTGGGGCCCTTGTGCC
CCAAGGCTAGCCCCCCCACCCCTCCTA