| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_58926
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_71004 |
3 |
1833 bp |
None |
Available |
Available |
LOC_Os02g50990.3, FRAME:-2, EVALUE:1e-51, 13102.m05791 protein RING-H2 finger protein ATL1Q, putative, expressed |
CDS Structure of MLOC_71004
Contig Sequence (3844 bp)
>contig_58926 3844 assembly3_WGSMorex_rbca.fasta
AAGCCTTTTTTTAAATTATACATTTTCATATACGGGGTTTATTCTGCAGCGCAAGATTTC
GCCCCGTAAAACCCCTCTTTGTCGAACTGTAAATGACTTTTGCAGGTCGTAAAAATACGG
AATCCGCTAGAGATACTCTAATAGTAACATTATCCATCACATCGTGAGAAGTTAACGGCC
ATATTCGATTGTGAGCATCTTAGAACAGCTCAAAACAATGATGAAAAAGGAAAGATCATG
ATAGAAAACGACATAAAGCAACTCCCAGCGGCATTGCATTTATTAGCAGGCAAAAATTGG
TATGAAATCCGATAATGGCAATTGCTTTTAAAAATCTAACGAAGACATAAACGTGGTAGT
TGTTGCACCGCGCTGCATTCATTGCCCGATCGTGGTATTGTAGTGTCACAGTGAAGAAAA
CGGTTTGGTCCTAGGCGAGTATTTTTAGAGTACTATAGGTGAATTTTGTTACAGAAGGCT
CCCTGAACCTTAGTCTTTAGCACAATGTTTCGTCTTGAATTTGGCACCAGATAGATCATC
ACTGACAACCAGCTGGAAAATAGAAACAACTACCTTGTGGTCGACAGGTAGGTACTATGC
TACGGATCTCCAGCACACTGATCAACATACAACCACCTAGTGGTAAAGTACCAAGTACTC
AGCTATGGATGTCAAGAGAGTGATCTATCTAACAACCATTTATGACCCAGTGGTACATAG
CTTAATTTTTGCTCCCTTGTACAACCTCGGTCCTGAACTAACTGTCGCTGAAATAAGTGT
ATCTAAGAAGTATGAAATCACATAACCTCGACATAATGCAGTTCTTCTACTGCTAGTTTT
TTTTTGGCGCTTCTGTAAAAAAAAGGAATGAAATCGACACTGCGTCTGCCTTTTCCGTTC
GTTTTTTTTTTGTCTTGAACAAAATGAAGGGAAAACTACGCACGAGAGGTTCGGATGATA
ACTGTACCTGTAGACAGATGGCACACGACAGGTTTTCACCCGATTTGCCCTGAGTCTGAG
CCTCATCAGCCACCACGTAGTGTGGTAGTTTCTCCAGTGCCTCTCGCGAAAGCCCTCTAG
ACGAAATGTCTCCGAAGATGTCGTACACATCATCGTGCCCAAAATCCGGTATGCTGAGCT
GTTGATGAAGAAAAAACCAATCTAAGTTCAGCACAGATGCAGCAACAACGCATGACGGGA
CCGCCATTGATTGTCTGAATCCAACAACTCCCTTTTTGCAGTGCTGGCCATTCAATCTGA
TTTAATTCTTTCACCAAATGCAGCATACACTTGACAAGCAACACTCATATATACATCACC
ATCGGTGTGGTGCCATTTCTCTCTCCGTTTTGTGGCAAACGTTGTCATAAACGATAATGA
GATTGATAATATGGCAATTGGAGCTGACCTGCCAACGGTACGCCATATGTGCTGACGATC
CAAGCTGCTGTTGCACAAACCGGGCATGCAGGAGCTGCTCTATGAAATCTGCCTGAACAA
ATGAATTAATGGACTTTCTTAGAGGCGCGTCGATCTACCAAATAATGATACCTCGTATAG
TTAAGGGAAATATGTGGTTGAGCTCGGGTGTAGGTTCACCCACACCCACACCAATTTTGA
ATATTATGGAACTAAAGTAATGAGTAACAACATATGTCCGACAATTAATCGAAGGAAAAC
CCGACAGTATATGGCGCATCAAAAAGACAAGTGGTAGCAAATATGTATAAATATAAAAAC
ACAGAATTCGCCAAATGGCACAAAATTATGGAACTGATTGTGGCATAAGGCATCCAGGCC
AACAAGCACACATATCAACTTGGGAAGACATTATGGAACTGATTGCCACAACAAATTATC
TGAAATTCCGAATTCTGGTAGCATCAAGGCCTCAAGGGGGTGAAAGAAGCTTAATGTTAC
TGACCATGGAGGAAGTGCCGAGCCGGTCCGAGCACCAGTAGGCGCGAGACGCCTCGAGAA
CCTCGATGGAGAGGACGGCCCCGGCGATCGCTCCCAATCCAGCTCCCCGCAGAACGCCGC
TGTCGGAGGCTCTGCCCGCCAGCGCGCCGGTGACGGCTCCGGTCAATGCTCCAGCTTAAT
AACACACCACAAAGCATGCGTCAATCAGAACACATTCTCGGGGCCATGGCGAACTGTGCG
TGCCCAACAAGAACGGCCGACGAGAGCACGCGAGAGAGGAGGAGCTGCCAGCAATAAATT
ACCGAGAGCGAAGAGGCCGGTGAGCGCGCCGGAGATGACGCCGGCGATCAGCCGTGGGAG
GTACACGGCGTCCACGCCGCGCTCCTCCAGCCACTCGCCCGCGGGCGCCGGCTCTCCCGC
CGCGGCAACCTCCATCGACGGCCTCCACGAGGATCGGGGGGAGAGGTACGGGTTTATTTT
TGGCGCCTCGGCTCGTTGGAGCGGGCGGCGAGAGGAGAGGCTCTCCGGGAGAGGAGGGCC
ACGACCACGAGGCTAGCTAGAAGAGATCGGCAGCAAAAGGGTCCAGCTTTAGCAGCTTCG
GCGAGGGGCTTCCCGTGAGGCGATACTGCTCGGGAGCCGCTTTTGCGACGTCCATGGCCT
CGCTTTCCACTGTGCTTTCTGTTCCTCTCTGTGTTGGTAGCGGCTTCTTTTCGGGGCAGA
ATTTAGGCACACTCCAAGCAACACATCTCGTGCCAGCTCTTCTTACTTTACTTCACCTCG
TGTGTGTATTTTCTTTTTCTTTTTCTTCCTGTGTTTGAGTTGGAGCCCATGTCGTGTAAT
GATTGGTACGGATGGAAGCTTCTGACGCTGTTGCCGGGTTTTCTTTTCTTGTGTTACAAA
CTTGCAATGAAAAGACTCGGGACTCTTTGATTTAAATGAAAATTTTGTAGGAACTTTGAA
GGATGAAATTTTATACATATTTCTTTTTTTTGAAGCCCTTTGGTTTATAAGAATGGGTTT
GTGTTCCTATGTAGGATAGGCTTGCCTCATGGGCATGGCGGGTGGGCCACGGGCCAGGGT
GGGCCCACCGTCATGGATTCTTTTCGATTACGTCCACATGATGTTTCTGATGAGGACGGA
TTCGTCTGATAGTGTCAGTGACAATATACCAGAATGGTTCACACGCGTGAGGCTCCTACG
TAGGGCCTACCCATTTACGTCGTGTTGTTTGGCTCACATGAGGCGTGTGCGAGCGGGCGC
AATGTTGTTTGCCTCGTGTCCGACCTTATCATGTCTACCATGATGGTTTCTTTACTCAGA
TGTCGATCCGTTTTTTTTCCTTTTCTTCCCTGGTATAGTGTGTTTTGCTTGCATCCTTGC
ATGGTCGTTGCTTGATCCGCCCCAGCATCCCTTTTTATGGGCCGGTTGGTGGTGAACCCA
ATGGCTTGCGTGTCGAGCACGCACGGTTCATTTTCTCGTGGTGTTGTGGGGTTCTGCGTG
CATGTATCCTATGCAGATAACCGGCCAGAGGATGGCTGGCAAATAAAAAACGATTGGTGA
TGGACCTAGTGCAGACCAGATGTCTTGTAGTCGGGCGCACGGGGTTGATCTACCGGTCGG
TGTTGCGTTCGCTGCGCTATTTCACTTATGTGTTGGTAGTTGGGTGTGCTATCCAGCTGT
GTCGGTTCAACTATTGTAAATGCTTTTCGACCATGCCTTGCCCGTAGGTATCAGGCGAGC
CTACGATGGGACGTGCAACCTCTCATATAGTAGCCCGTATCGGTATTTCACTAGTAGAAA
ATAGGCCTTTGGTCCACTTGATGAAATCCCATTAATCCTGGTTCACTTAAGAACCGGGAC
CCATGAGGGCATCGGTCCCGGTTTGTGAGGCCAGGGCATCGGCCGGGCCTCGTGGGCCAT
TGGT
