| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_5888
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_70979 |
1 |
1083 bp |
AK365163 |
Not available |
Available |
None |
CDS Structure of MLOC_70979
Contig Sequence (4675 bp)
>contig_5888 4675 assembly3_WGSMorex_rbca.fasta
CCGGCCGGCAGGGATGGCGTTGGCGGCGCGGCGCGGCAGCTAGGCTAGCGGGGCGCGGAG
GCGGAGCGGAGAGCGGGGCGAAGCGGAGCGGAGAGAGTCCATCCGGTCCATCATGATGGC
ACAATTGAAAAGCATACATGAAGGACTTCTGTCCAAACCTCTATACAAAGAACCAAACCA
CTGAAAGTTCAAAAATGTTTCATGCACCCACTGAATGGCTAAAAAAATAACTTCCTTATG
TAAAACATGCAATGTCAATATTATATGCAGTGTTGTTAAAAAAAATCCAGGTGAATCTAT
CATATTTCTAAGGATAAGGGGGAATCATCATTTAAACTGATAAATTTGTCAAAACTAATC
AGGCCTTGATGGCCTAACATATTAATATGACGTCCTGAATACGTGTGTGCATTGATGAAT
CATCAGATCATAAGCCTGATGAAGATGCTCTCGACATGGAATATAGAATAGCAATCAGTT
GGGAACTTTTAAAGTTTTGGTCATTACCTTTGTACCAAATTCTGATTGTCCAATTGGCCG
AACAGATACATTTACATCACAGCGAAGGGAACCCTCATCCATGTTACCATTGCCCACTCC
CAGGTACCTAACAAGCCTTTGCATCTCAGCACCATACTCGGCAGCTTCTATCCCTGACCT
CATATCTGGCTCTGAGACAATCTCAAGCAAAGGTACACCAGCTCTGTTTAAGTCAACCTA
GCCATCAGAATATAAATACTGGTTAACCACCTTAAATATGTAGTTACAATTAGCCAATAC
ATTACTGTTTGATGCTGAATTCACTTTGTTTTATTTCTTGTCTCCATCTTCTTGTATTAT
TTTTGAGAAAGAAAGTCTCTTTGCTTTTGACCAAAGCCACAAAGAGATAAAGACACTGAT
CTGATAGTAAGTGCAGTTCATCTTCTCTTGTCTCGTGAAGTTGTCACATTCGAATTTCAG
TTGGATATTACACTGGTATTTACATTCTGTATGACAGGCAGGGCTAAACCAAATGACCAC
ATAACTATAGATAAGTGTGATATCCAGTACATATATGACACCTGTAGCAAAAATGCATAA
GAAACCGAATCCCCTGTATTGTTTGATCTTTCGAGTTCATAGCAAGGTGTTACAGATAGT
TTGTCTTAAATCAAATTCCACGACTCCTCATCTTTAGCATTTATGAATGAAAATGTACTG
TTGCACTGTGATGGATGTCAACCTTTTCCATGATTTTTGCAGCATAACAGAATAGCATGA
GAATTTGATAAGAGTACAAAACTTTAATGGAAAACAGGCAGTTAGCCAGGAATAACAAGG
ACACCTGAGAGTAATTTCCGGATTCAGAGTGAAGCAGCTTGCCAGCATCTTCTTCCATAT
GAACCCTCGTGACACCAAATCGCCTGTGACCACCACCAAACTCAACTGGAATATCCACAT
CAAGGTAACCCTTCTCGGCAATTGGAATGTCAAACTGGGAAATCTGGTACCCCTTGGGTA
GGTCCGGGTAGAAGTATTGCTTCCGATCAAACTTGGATGTCATGGCGATCTTGCAGTTGA
GAGCAATGCCTATTTTCACTGCACATTCAACAACCTTTGCATTCAGAAGTGGCAATGTTC
CAGGGTGGCCCATGCAGGTGGGGCAAACAGTGGTGTTAGGCTGCGAGCCATAGTTGTTTG
GGCAGGAGCAAAATGCCTTTGTGATGGTCGAGAGCTGGACATGGGTCTCAATGCCGATAA
CGGATTCAAAACCTTGTGTCTTCTGCTCCGCCGCCTCCTTAGTAGCCTGTTGAATTGACT
TGGGCACTGCTTTGGGCTCAGTAGTCTGCACACTCTCCGCTCTAGTTGTGAAGTGAGCTA
GTGGACGACGTTGAGTGGTACAGAACAGGCTGAAATTTGCTCTAAATAAGGTTGACGTTC
TGATCCCTCGGAGAAGCGTTAGAGCCATTGTGGGCAATGCGCCTCTCGTGAGTTGCAATA
CACAATGTACTGGGTGGACCACAGCCTGCAAGCGGGAGAGCAGAAATATTGAATACGGCC
CGATTTCAGGGTAACACAAGATACGTGCAGTTGCATAAATAAAGTACAAATTCTTTGTAC
TAGGATGCGAACGAGGTCCGAAGTAACTTGGAGAAATTGCAAGACAATTAGCAAGGTTTA
GAATTTATCCAGCATACTTTCATGAAGTTTAGGTGGCTACATAGAAGAATGACAAATCAA
CCCAGTTTTCAGAGGTGATTTTCTAGAAAAGATGCATCAAACCTTTGTTCTCCACAGGAT
TGACCAATCAGTGAATATAGTCAAGCCTGCTGTATGCTTCCAGACTTGGCTACTGACTGG
TTGCTCATGTGTCGAACAAGCAGGAGTACGGTTTGATGCATCTTTTCTGAATACCACTGT
TTGAAAATTGGGTTGATTTATCATTCATGAATGCACACCTAAAATTCACGAAAGGGCGGT
AGCACGGACACGGAGGTACGGATATAGGGATACGGCAATTTCTAGAAACAACCTTACGGG
GATACGACGAGTATATACATACAGATAATTAAAGAAAAATGCAGCATTCAGCATGTACGA
AAGACTTAAAATAATTTTAAGATGTGTGATCGACGCCAGCCCCACTCCCAATCCCCCAAC
AGAAGCTTGCTGCCTGTCATGCCACTGCGCCGACATGTCATTCGTTCCCACTCTCCGCTC
CCAAGCCAACAAGGGCACAAGTCGACAGAAATCTAAATAGAACAGCAAACTGCAACGGCA
GCAGGCCAGCAGCGCCGGCAGGAGCGCAAGACAGCAGGCGAGAGGAGGGGAAGGAGGGAG
GGGAGAGAAGAGGGCGTGGGACGTGAGATTATTACTTTGCTCACCGCTGGGAGGAGAGAT
GATACGGCGGCCCCGGCGGCGCGGTCGCCGGAGCTTGGAGTGGAGCGGCGCGTCCCCCCG
GGGAGATGCTGTGGCGCCCCTGGTCCACCGCGCCTCGATGTCCAGGGTTCGCCTTCACGC
AACTGGGCCTTTACTGGGCTCCTTCGTGTTGGGCCAACTCTTTTGAGCTTTTGTAGTGTA
AGTAGTTTCTTTTTTTAGTTTCGGGATTTTGTACTAGTTTTCCGCCAAGGCTGCGTTTGG
AACGTTGTATTTTTGCTATCCTTATAATATTTTACATTTATATTATTCTAGCCTACAACC
AAAACACATGTCAAGGATTGTATTCTCATTCCGCTTCTCAGCCTCTGTTTGAATTTATTT
TTCTACCCTTGTAACCTGGCTGCCATAGTCTAAACTTTTAAGAGCACAAACTTTCAACAA
AAGCAGAATTTCAACAACACAGAGTGCGCTTTTAACAATATAAATTTTTAAATACGCACA
TACAGATTTGAAAACAACACAGACTGCACTTCCACACATATTGCACAGGTATAAAATGAG
ATAATTTTTTTATTTATATAACAATACTACAACATAAAAATATAATATTTTTGCATTCAT
CCATTTGAACATAGTTTCGATAACTCATAGTGCTCAAAACCAACAGTTTAAATTACAAAT
TTATTGAGGCAGACTTGTCTCATCTCGTCCGCTGCTACATAACCAAAGTTAGAACTCGCA
ATTGTTCAATCATTGTTCATTTAGACATAAAGTATTTCAGGAAGATTAATCCTCGGCAAT
TGTTCAAGCAGTGAAGCAGCTTCAGGGCAGAAGAAAAATACTCCCTTCGTAAGATCTGAC
TCAAAGTTTTGGCAGTCTTTGGAGTATCTTCCTGTGCAAATAACAGATTACAGTGTCACA
ATCTGATATCACAATTTATCGTACCACAAAACCGTATGACAAACATGAACAGAGATGTAT
ACATTTTACAATTCAAAAGATTCAACTCATTCTCTCCATGTTTTTAGTAGAAATCTTATC
TCTATCATGTTTACATACTCTTTGGCGACAAAGAAGATACCCAAGCCTTACAGTGAGTTA
AACCTTAGAAGGGACATATAATAATATCTGAAGAGCATGGTCAGCACATGTCTAAATAAA
TTAGTAATACTGGGACATTGAGAAATTTCAAGAATAATAGAAAAATCTACCGTACCAGCA
TATCCGATGCAAACTAAACAAAATTATGAATGTGCTGGGAAACTAGTATAAGAAATGGTT
AAGCTGGTAAAAAATGAACGAGTGACTACAGAACATAATTTAAAGTACACAAGGAAATCG
TCGATCAAAGTTAAATATATAATTTAAATTAGTGCATGCCTTCAGCATTTATTTTAGACA
GTTGTGCAAATTTCAGACTAAATATTTCCTAGAACTTGAGGGATTCTAAAATCCAATGTC
GAAGGACTTGTGAAACATCTCTCAACCATAAGAGAGCATGACATCATTCAGGCAAACTTC
TGTTGGGCAACTGTGTCCAATGACCCCTGCACTTCATACTCATGCAGTATGGTGTATGAT
TTAACACGGAGGGAGTTACTAGATTAGTCGAATATTCAATTGAGTGTATACAATTAACTT
CCTTAAGAAAGGACCTACAAGTAACAGACTACAGTCGCAATCTTGTAGATACCATTACCA
TTTTTAAGTAATGCGAATTCAAACACTTCCCCAAGTATCAAATTGCAGAAGTTTTAAGAG
TTACCCTCAATAAATCAAGCTAATTAAGCTAAGTACCGCATCACTCAATCCATGT
