Contig Data
morexGenes
Links



Map Locations of contig_58773 (5530 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_58773

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70914 1 820 bp AK366111 Available Available None
MLOC_70912 11 2402 bp MLOC_70912.1 Available Available None
MLOC_70913 1 836 bp AK370822 Available Available None





CDS Structure of MLOC_70914






CDS Structure of MLOC_70912






CDS Structure of MLOC_70913






Contig Sequence (5530 bp)

>contig_58773 5530 assembly3_WGSMorex_rbca.fasta
TCCGTATGTAGTTTATAGTACAATCCCTAAAAAGTCTTATATTTAGGAACGGAGGGAGTA
GTTTATTTCTCCTTGATTAGTTTTTTATCATGTTTATTTGAATTCTGAGTTTATTTGTCC
GGTATGATATGTTTGAATTTAAACGGTTTGTGTTCAACAGTATAATTAATTATGTAATTA
AATTGTATGAAGTCAAATTGTTCCAAGTTTTAAATTCTTACATTAAGTTGGGAAATTAGA
ATTTTTAGCATAAAGGATCTTCAAGGAATGTCTAGACTAAACAAGAATTTTTAGCATAGA
GGATCTTAAGGATTGTTAGGCTATGCCAAGGCTGAACTCCACATAGCACAATCTAATACC
ACCACTGTAGACTAATATAAGACGTTTTTGCAGTTCAAATTGCACAAAACAGCCAACATT
ACTGTACATAGTTTTGCCAGATCAAGGAGCAGTTAGAAGCGTCAAGTTTTGACAGCACTC
TTAAGTTATTCGCGCCCTACATATGTGAAAATATGAACTAAAAAGGCACGGCAACAAACA
GATTGCAGGCAACAAACAGATTGCATCGTGGACAAGCATATGAGGGTACACAACTGTCAT
CCACAACATATTATATAACCGGTTCTCGCATGATCTTGATGAGCATATTGTTCCATCAGA
ATGGCAACTTAGGAGAAACAGCAGCAGTCTTTTATCGTCTTCATTCACCAGGACACGTGC
AAAATTCGATAAAAACTACGACACGACACTGAGATATTTAAGCATGAACATAGTAAGGAG
GTCCAGTATTGGAGGTAGCATCGATATAGACGGGTAGGCAGGGGCACGAGCTTAGAACAC
CCGGACAGGCTTCCCCATGGTGCTCTTGATGTACAGACACCTCACCTGCAAAAACCAAAA
GACATAACAAATGTCATGTCATGTCATGTCCAGTTTGGTTTTTCAGGCCTAACCCGCTTG
TCCATCTAAGTATTTCACTCGACCAACGAGAAGGAAATGAAACGGGAACACAAGGAGCAG
CAAAGTTTGAACGGGACTCACATTCTGCCAGTTCTTCTTGAGCAGGGAAACCAGGAAGTT
GACGCTCATCTGGATGTTCTGCTGGATCTGCTTCTCCTCCATCGACAGGTTGCCAACAGC
GACACCCATGCACAGCACCTTCTTGAGCTGGAACTTGATTGTGGCTTTCGTCTCATTCAC
CTTGGCTTCCAGAGACTCCTGGTGAGAAACCAGAGTCGGGAACTTTCCTGCAGGGCCATC
AAAACAAACAAAATTAAGTATGCACGCTAAAAAAAATGAGAACAAAGGTACGAGGATAGT
TAAGGCTTTCATGCAATGCCCAAAAAGGAGATGCCATAACTCTAATCATATTGGGGCATA
AGAGTGGGATATAATGCAAGCAGAACTCTACAAAACAATGACAGCATAATAGTTCGGTAA
AAAAACCTATGGATCCCAATGGAAGTGGAATGGAGTTATGTGCATGATCATCTCATCGCC
CACAAATACCTGGCATATGGCACTGATCATCCATATAGGGAATGGAATGAAACGCAAGAA
ACGCTTGCATGATTCTGACAGAAACCGATTGCTAAATCAATTCAATTAATAAATCGATGC
TAGATGAGACATGCAGCAAACATCAACATGACAACAGCCATGAAGAAACATTGTTCCAGG
TTTTAACTACGAGGGAGGGTTAACCCAACCAGCTGGAAGACAAGCAAAGTAATAGATGAC
AGATCAGAACACTTGCCTGCCTTGTTGAGACCAGGACCAAGGAGACGTGGAATCTGCTTG
ATAATAGCCTCTGAGGCCAAGAAAGCATGGTACTTCTTGGCAAGCCTCTTGACAAGCTTC
TTGTTCTTGTTCATCTTCTTAAGAGCTTCAACGTCCATGGAATCCAGACCAATCTTTTCA
GCCTGCAATCAGGAGAAAAAGCAAATGTAGATACTAAAAAGAACCATAAGCTATGAGAAA
GGTTAAAAGAACAGTGCTCCAGCTATCACTTCAAAGGCTACAGTTCTAAGATACAAAAAG
CATTCATGTGATGTAACAAAGTTATGAGTTGTCATATTAGCTAGACAGGAGCGGAGCAAC
TCATTTGAGTTGGGTACAAGTGAACCCGATAAAGTTTGCATATCACTTCAAGAATTACAC
TAGCTTAAGACTAAGCAAAGAACTAATCACATTATTTAGTAGAGCTGAACCAAATGATAA
TAATCTTACCAACGCCCCTATAACCAGACAACGATATAGAATATAAAAGAAAGAAGGTTG
TAGTGTCGGTCAACATTCTCACAGCATGATGCAATAACTCATGTAAAGAGTAAACTGTAA
TCACAGTATCAAACAATCATGTTAAAGAGGCCACAATACTAATATGCAACTAACATTCAC
TAGATGTAACAAAGTTATCAACGCTGCTAGAAATTCTCAGGACTAGTGATTGCTCATGGA
ACGAACGCAATAATACTAATTAAAATCACCACCTATGTTATTACAGAGGAAAAGGATAAG
TGATTAATTAACAGTAGCAGCAGGTCAATACCTCTCCCACGTGCTGGGCATCACCAAGCA
TGCAGACCCTCATCTTGGGGCGAGGGACATGGGGCAGCTTGACGGAGCCGCTGAAACGCT
TGTCCTTTTGCGGATCATAGTTCTTGAGGCCGATCTGGAGCTCAACGGTCTCAGTGAACT
TCCTGTTCTTCTCCTTGGCATCCGCCACCACCTGGGTGATGGCCTCCTTGAGGGCCTCAG
TCTGCAGCTTACTGCAAGGCAGAGCATAAAAGGTCAAAAGGGATGGAATTCGAAGCGCAA
AACAGCATGATCTCGCATCCAAGCAGCTCTTATAAGTAATAACTAGACCCTAGAGTTGTA
AAGACACAACTTACGTGTATTACTACTATAACAAACGATCTTGAATGCATGCATTTATTA
GCTATGAAAAGGGAAGGAGAAAAATGGTACATGAGCAGTAACCACAAACCCAGCAAATCC
AAGAGGAAGTAGAACCATCCTGCGAATCCATAATAACTAGACAAAGGAGTGTGCTATAAA
CCGAGTCTCCGCACGCTAATCACGGCCACGAAAGAAGAGTGTAAACAACGTCTATTCACC
GGAGCAGCAGTAGGTCCTTGTCCAGGCGCAACCGGAAGTTACTACTACTCCAGTCCAGGC
GCGAAGCCGGTGACAGTCTCACGGTAAGATCCAAGACAACCGTACGAAGGAGAGGCCCTA
TGTAGCAAACTCCGAATGCCAACCACCGCCGCAAATTAAGGGGTATAAACAAACACCATC
TAGATATATATCTACCATAAGAGCGGTTGATTCTAGTCACGCACGTCATGGATGCAAACA
GCCGGCCGGCCGGCCAGCCGATTACTACACCAGATACGACGAATTTGGTAACGGTTTATA
CTCCTCATCATGGTGTTTATGTAATCAAGTTACGAACTAGGCGCGAGATCCATATATCCA
TCCGTCTACCTATCTACGTCGGCCACTGCTTGAGCGAGATCTGTTTCATTGTAGGCACTA
GTATTCCTAGCACGAACGAACTAGGGCCTTGACGGGAGGGATCGATCGCACGAACGAACT
AGGGCCTGGACGGGAGGGATCGATCGCACGGGGGGGAAGCGGGGTTACCTCATGGCTCGG
GGGGGGGGGGTGGGGTGGATCGATTCGCCGGTCGCCGATTCACCTGCGGGGAAAGGGGGG
AAGAAACACGGTGAGATGACCGGCGGCGGGGAGCGGGAGAGGGAGAGGGATCGGCAGAGG
AGGCTACCTGGTGTGGTGTGGGGTTTGGGGAGGGGCGGCGCGAGGAAGGAAACCCCAAAG
CTCTATGTCTATGGTGGGGGATGGGATGGGATGGCGCTGCCGGCCGTTGGATGCGCTGGC
TGGACGGAGTCACGGCCGTCTGATCGTGGGCCGAGGCAACGTACTACGATGTGGGCTGCG
GGGTGCGTTTCCCAGCCCAATGAAAAATTGCGAAACGGCGTGCTTCGTATTTGATTCTCA
CTATAAAAAATCTCAAGCTTTGCTCAAAAAGAAAAGTAAAACCTCGAGCTTGAACTGGAT
TGTTTTTCCCAAGCGGGCTAGGCAACGAAAGCTCTCTTCTTGGACAAGTATGCCACGTTG
TCAGCTTCCAGCACACGATTTGACACGCACGCATGCAACAACTTAACCTGCATCAGCGCA
ACAGAAAGCCCATCATGATTGGGAAAAGCTTTTGCCTTCGTTTCAACAAAAAATTCCGCT
GACCATACTCGCAACATACTCAATTTCACGGCACAAATATGAAATATGTCGTAATAAAAA
GCTAACGGATCCCAGCAGCATCTCAAGTTGTAATAACATAACAACATAGTCAGTTAATAG
ACAAGTTGGGGGTCACCCAACTACTACTACCATGTATGTACAGACACATACTTAGTACTC
TATACTAGTACCAGGTTCGAATTGAAGAATCTTATCTTAAAGACAACACAAAGCCAGGAC
TTGAAACTCTTCGTCGTCATCATCATCAGCGGCGGCAGTTGCCTGGAGGCCCCTGAGAGC
AAGGGTGGCAATGACAGGGGGCGGCAGTCGATGCAGCTTGCCTCTGCTCCGGCTCAAGGC
ACGCACCTTCACACCAGTGCGGCTTCATCTGCTCCAGCTCGAGTCCCGTAGCTTCACACC
AGTGCGGCTTCACCCAGACGCAATAGGAGCGCAGAGCCTGGTGCTCCAGTCAGGCAGCTG
CACGTGGCAGTTCATTGTCTTCGGCCAGACGCAATAGGAGCGCTTGGCCTGGTGCTCCAG
TCGAGCAGCTGCACATAGCAGTTCATTGTCTTCGGCCAGAGCCAGTAGGAGCGCTTGGCC
TGGTGCTCCAGTCGGGCAGCTGCATGTGGCTGTTCATTGTCATTAGTTTTCATCAAAAGG
ATGAAGTGAAGAAGCGGAGCACAAAGATCATGGGACTAACCCAGGTCCTGGCCGTCAATC
CACATGCTGGATGCCCCCACGCCACTCTCTTCTCTTCTCTTCTCTTGCAGCCCACATGGC
GCCACTGTCTTCCAAGGAGCCAGTGGCGGTAGCATTTGCTGAGAACAAAGAGACCGAGCC
AAGGGCGAGAGGGCGACCGGCTCTGCCCTCAACTCCTCAGCTTCTTTTCATGCGATGGAC
TTCCCGAAGTCCACGCGACTGTCTGCAGTTTACTCCACCGACCGATGAAGGAGTACGTGC
CCCGCCTGCATCTCAATGTGCAGGGAGCAACAACACCGAGAAGCGCACGGGCATGACAAG
ATCAGGTGGATGACTAGCTCGGCCCGGCGCTTCTCGGTTCTTTCATGCCTGCTCCTGCCA
GCCAGAAATGAGACGGATATCCCATTTTATTTGATTTGGAAGTTCAGCGTGTGCTGGCAG
GAGCAGGCATGCCCAGGGCCCCTCACCGGGGCCGGGCTAACCGTAGACTAGCTTCAGATT
GTTGTTGGTGGTGAGTCTGCAAAAACATCGGGTGTGTCAAAGCCGGAAGGAAACCCTGCA
AGTGCATCTT