morexGenes - Barley RNA-seq Database

Contig contig_58765
Source Contig contig_58765
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_58765 (9081 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_58765

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_70904	2	2935 bp	MLOC_70904.2	Available	Available	LOC_Os11g01620.1, FRAME:-3, EVALUE:0.0, 13111.m00078 protein inactive receptor kinase At2g26730 precursor, putative, expressed
CDS Structure of MLOC_70904

Contig Sequence (9081 bp)

>contig_58765 9081 assembly3_WGSMorex_rbca.fasta
TCCTTTCTTGCATCAAGGGGCATCTCTACATAAACATTTAGCCAAAGCTCTCCATGAACT
AAACCTGAAATATCTAGGTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
ATCAAAACCACCAAGGGAGCATATCATGCTTTCAATTGCTCACGTGTTTGGAGCCCATTC
AGTTGTCAACCGAACAAGACAAGTTTCGATGGAACTTCGCCAGAACGGAAAGTTTTCAGT
CAAGTCCTTATATGGGTGATTGCCCACTACGATGTTCCCATTGATAGTAAAAAATGTGAA
AGCTCACACTACATCTTCAAGTGAAGACATTCCTCTGGCTTTTAAATAGAGGTGTGATCT
TGACTAGAGATAACCTGTCATGCCACAACTGGCAAGGTAGCAAGACTTGTGTCTTTTGCT
AACATGACAAATCAATTAAACATTTACTTTTTGAGTGTAAATTTTCTCATGCAATATGGT
CCATTGTTCAAGTAGCTTTAAATCTTTACCTGTATCGCAGTCTGTGTGATATGTCTGGCA
ATTGGTTGTGGGGTATTGATAAACAATTTTGTGCACACATTCTTATGGGGGGCGGTTTGT
CTTATGTTGGTCTCTATGGCTTACGAGGAATGATGTGATTTTTAACAAAAAATAATGTGT
TTCATCTCCTGTGAGGTTATTTATGCATGTAAGTGATGACTTCGTACTTGGTCTATCCTC
TAGAGACCGGAGGTATGATGGTGCCTATCCGCGTGAATCATATGGTCAGGAAGAATTTTC
TCCCGTTATGGATGGTGGTGTAATCTTCAAGTAGATTTTACCCCACCTTAGGACCTTCCA
TTTTTTGGTTCTGTTGGAAGTTTTGAATGTGTGCATCGTGCTATGCACAACATGAGGTTG
GATGCTCGGATGAAACCAAGGTAAGGATATGCCAAATTGAACGTGGACGCTGGTTTTGAT
AGTGATATGTTCGATGGAACTGTTGGAGCGGTTGCACGTGATTATTGTGAATAGTTCATC
ACGACGGTAAATGGAAAATTTGATATATGTTTTGACTCAACGAAAGCCATAGCACGGAGA
TTTGGGATGGTTCTTGCACGCATTGTTGGGTGCAGCAAGTTTGAAATTAACTCGGATAGT
GCGGAGGTGGTCGCAACATTACTTGATGGATTTTCTTCTTCATTCGCTTGTGTTATCTTC
GAGGATTGTTATTTTATGTTTCTTGATTTCACTCCATGTGGTATATGAACATTGTAATAA
AAAGAGAAATAGGGCAGCTCATCAAATAGGTAGGATTGCTAGGTTTTTTAATCCTTGCAA
TTCATTTTATTGTAACCGATGTCACAGTGTCATGAATGAATGAAGGAGGAGATGATTGTA
AAAAAAAATCATGAGCACACATTCGTCATGTATGGTTAAGATGCACATAATCAATATGAA
AACACACACAAAAATACAGGCAACTAGCAAAGTCATATAAGATTGAAGCTATGCATATGC
GTGGAAAAATAAAAAATGACGCAAAGCAACGAGATCCGTGGTTGGCAAACTATAGCAATG
ACAATATTCGTACCAATGACCATATTCACATCAACTATTTCATGACGCCACACGTACAAC
AAAGTTCTTTAACGACAACGTTTTGAGAAAGGAAGCGACGTTCAAGTACCGTCCTCATCG
GATCCGACCACTAAGATTAGAATTTAAATTTTCACCTTAAAGATTTTTGGCATGCTAGAC
TTCATCCAGTAAACTATTGTCCTGAACATTCTTCCTTGTCGGTTGGTATATCTGGTGGTT
GATTATCCACAACTCTTGATTAAACCAAGTTACTGGAGCACCACTATTTACTGGACATAA
TTAGGCCGCCTTCAGAAGGAAGAGAGTGCGAGGTTTACTGGAATCGGTTTTTGAATGTAT
CAAAATTCAGTTTGAAATTCTGAATGACATGACGACTTGACGAGGAAGCAAGCCATGAGA
AATTCAGAAGTGTGATCAACAGCTGTGACAAATCAATAATGTTTATATGGGTTTGGAATT
CCTGACAGAGATTCTAGTGGCGCAAATAATATTTGCCTATACAAACTATATAGAAAATGA
AAAAGAAGGGTGATCCCTTCAACTTATAAATGAATCAAAAAATTATCAAAACAACTAAAC
CTCAATGTAACAATCTTCTTTCCTCTCTAATCCATCCAAGTCGGCCACTGCTCTACTCGT
TGCTTGCAGAAGCAACATGGCCTTCCTCGCTCGGTCCGGCGGCGCCGCCCTCCGGTCCAG
GCCGAATCTCCTCGAGCTGCCGCAGCACCTCCCGCGCCTCCGGCCTGGCCGACGGCGAGA
CCTCGACGCACTGCAGCGCCAGCTTGAGCGTGTCCATGAGCTCGTCCCCCTCCGGGCCGG
CGGCCGTGTCCCGCATCAGCTCCAGGTCGAACACCTCGTTGGTCCACTCCTCCTTCACGA
TCGACCCCACCCACTGCGGCAGGTCCATGCCGTTGGTCGTGTCGGCGGGGGACTTGCCGG
TGAGCAGCTCCAGGATGATGACGCCGAGGCTGTACACGTCGGTCTTGCCGCTCGCCTTCT
TGAGCTTGGACAGCTCCGGCGCGCGGTACCCCAGCGCACCCGCCGCGGCGAGCACGCTTG
AGTTGGCGGCGGCCGTCATGAGGCGAGACAGGCCGATGTCGGCGATCTTGGGGCTCGAGT
CGTCGTCGAGGAGGACGTTGCTGCCGGTGAGGTTGCCGTGGGTGATGCTCATGTCGTCGT
GGAGGTACGCGAGCCCGCGGGCCGTGCCCTTGGCGATCGCCATCCGCGTCGCCCAGTCCA
CCGGCGTGTTGGGAGCTCGAGCTGAACGAACGCCATGAACCAAATGTCTGAACTCAGAAC
CACAGATTTGAATGTAATCTCCTTCAAAGGATGAACAATTTTTGAGGAATCTCACCGTGC
AAGAAGGCGGAGAGGCTGCCCCTGGGAATGTAATCGAAGACGAGCAGCTTCTCCCCCTTG
GGGCCGAGGTAGTAGGCTCTGAGCGAGAGCAGGTTGGGATGCCGGACCTTGCCGAGCGCC
GCCGCCTCGGCCTCGAACTCCTTCTGCCCCTTGGTTATCTTCTCCCGCAGCCGCTTCACG
GCCACCAGGCTGCCGTCCTCCAGCGTCGCCTTGTACACCGTGCCGTACGTGCTCTTCCCC
ATGATCTCTGCGGTGGCGCACAGCAGGTCGTCGGCCGTGAACGCCAGCGGCCCGTCGAAG
TGCACCAGTTTGCCACCTACGTCGCCGCCGGACTCCGCTTCGGATGCCCCCGGCTTCTCG
CCTCGCCCAGCAGCTGCAGCGGCGCCGGCACCGGCGGCGTCCTTGCTTGACGACTGCTTC
CCGCTCCGTGCTCCAGTGCTAGTGCTGGACTTCTTCTTCCTTGTCAGTAAACAGAGCAGG
AGGCAGCAGAGCGACAGCAAGATGAGGACACCAATCACGATCCCGGCGATGATCAATGCG
AGCTCCTTGGTGCTGAACTTGCGGAGGCCGTGGCGCCCGGTTGCCCCTTGCGAGGTTGCC
CCCGGCGCCGGAGACGGAGACACGGGACAGGGCGGCGAAGAAGCAGAGTAGCCGCAGAGC
AGTATGTTACCGGTGAAGGAGGCGGGCCCAAACTTCTGGGCGAGCGAGGCCGGCACCGCA
CCGGAGAGGTTGTTGTACGAGACGTTGAAGGACTGGAGCTTAGCGGTGAGGTTTGCGAGG
CTCTCCGGGATCTCCCCGGCGAGCTCGTTGCCCGAGAGGTCGAGCGTCGTGAGGTCGTGA
AGCGAGCCCAACTGGGCGGGGATGGAGCCGTCGAGGTTGTTGCCGGCCAGGTCCAGCTCC
TGCAGCTTGCTGAGCCCGGCGAGCGACTCCGGCACCGGCCCGTCGAGCGAGTTGTGCGCG
AGGCTGATGAAGACGAGCTGGTAGCTCCCAGTGACGGCTTCTTTCCGCGAGGACGAGGAC
GGCGCCTTGGAGCCGCCCCCGAAAGAGTCAGGGATGTGGCCGGAGAGCTTGTTGTATGAG
AGGTCGAGGAAGAGGAGCGACGAGGAGCCGACGACCTCCGCGGGGACCTCGCCGGAGATG
GCGTTGCGGCTGAGGTTGAGGCGGATGAGCTTGGTGGAGTTGGCAATCGAAGCCGGGAGG
ACGCCGGTGAGGAGGTTACTGCTCGCATCGAACGACTGCAGCGCGAGGCAGCGGCCGATC
TCCGGCGGGATGGCGCCGGAGAAGCGGTTGTTGAAGAGGTAGAGGCCGCGGAGGTCGGGG
AGGAAGCCGAGCGAGCTCGGGACCGCCCCGGCGATGGCGTTGTCGTGGAGGCTGAGGCGG
CGGAGCTGGGTGAGCTGGCCGAGCCCCCGCGCGGAGAGGGTGCCGGCGAGGCCGCGCCAG
GGGAGCGTGATGGCGACCACGTTGCCGTTGACGCACTTGATCCCCGTCCAGGCCCCCGAG
CAGGCGCCGCCGAGGCCGGTGTCGTTCCAGGAGCGGAGGAAGCCGCGGGGGTCGGAGAGG
TCCTGCTTGATGGCCTGCAGGCCCTGCCGGTCCGCCTCGCTGATCACGACGCCGTCCCCG
GCGGGATGGTGGCGGTGGGCGGCGGCGGCTGCCGGCGACGGGAAGAGGAGCGGAGCGCAG
CAGCAGTGCAGGACGAGCAGCAGGGCGGCCGCGCGGTTACCGCCTAGCCGCAGCGGCATG
GCGCCGGCCGGTCTGCAGTCTGTACACGAAGTGAAGCAGGGGAGGCTATGGAGCACGAGA
GAGACGTTGCGGTGGCGAGGGGAGAGGAGTGAGGGAGGGGGTGGGCTCGTTGGTAGGTAA
GGTAGGGTGTGAGGGGTGGTGGTGTCATAAATGTGGCGCGCCCGCGAGCTATTCCTGCCG
CTGCAGAGATGGCGCGGGAAGAAGACGAGGGCGTGCACGAGGCCACCAACGGCTAGTAGA
GGCAGGAGGGGAGCACGAGCTAATGGATTGATTCCCCCTCCCAACGGCTAGTTTCGGATT
AACTCATCACGATGCAAAGTGTACATCATGTTCTGCGGGCCAACGACACGTCCGCATCGT
CCGCATCGTTAGAATCCATCATCTACAACCGGACTGAGCTGTTTTTTCTTTCAAAAAAAG
AAACATCTCGTACATTAATTAATTATTAAAAAAGTTATTACAACTATTCATTGCAACGTA
AGACCGTCCGGACAAAAAAACTATTAAGAAGAACACCATCAAACTTACTATCAGAACAAT
TTACTATACTCTCTTCGTCTCAGTTTACAAGTTCGACATATGTACCTAGATCGATAATTT
AATAAACTTAATGAAAAGCATATATTACAAAAAAGATATTATTAAAAACTTCACATATTC
TATTTTCTAGTAATATAATTTTTATGTTTAATAATATATTTTATATAAATCAAATTGACG
ACCTACGTACACGTGCATGTCTTCTAAACTGTGATGGAAGGAGTAAAACAAAACTTTGCA
ATTTTGTGTGCCACTCCATTAGCGCACCGATTAGTTTCTGAAATTTTGAAATTCTAAAGA
AGCCTGAAGATACTCAATGTCTCTTACTAGAGATAATAAGAAGGAACTTGACAAGGTTTT
CATTTGCAAGAAAAGAAATTAAAAAAGCACAAGCAATCTTAAAAAATGATAGAATTGTAA
GAGCATTTACAGTCGGACCCCTTAAATCCGTCACAAACATTCAGATAGATTTTCCGATCA
CTAACCGGTCACAAAAAAATTGACCTAGCTGAAACCTTCAGACGGGCCTCAAACGTCCGG
GTAACCGATAACCCTCGTATTGAGCCCAAATATGAAGCGGATATGAGTGTGACACCTTTA
GGTTAATCTACAATGATCATTGAATTGAACTACAGTGATGGCCAATATTAAGCTAATTAT
TTTGCTAAACAGTGCTTGATCAATNTTAAAATCATATCTCATTTCAAATTCCATTTTGAA
ATTCAAACTCCTTTTAATAAGTGGATTAAATCTTTTGACAGATATGAGAACTAAAATCAT
GATTGGGTTTCAAATATTCTTGAGGTATCTATAAAATTGAAACCATATTTTTTCAAGGTA
TTTAAGTGCCTCCAAACAATAATAACAGAGGCCAAAACAATTAATTAAATACCTTTTTTG
AATAATGAAAATTCCCACACTTCCGAATGGGCCCCAAACTTTTTATGGCACAACCTAAAA
AATGCAAGTTAATGATTGGGTGAAACACTATATTGTTACAAAAGTAACTTGCTGTTATAA
TTAAATAAAATCAGAAACAAAGAGAAAAATAAAAAAAAACGAAAGGGGCCAGGCGACACT
GTGCACTTAAGCCAACTAGCTAGAGTGCCGGGCGAGCACACCTACCTCCATTGTCCTCCC
CTCCCCACCCGAACCGACGTGGGCGCGACGATGACCGCCATCGGCCGCCCCCGTCACCGT
GGCGCGCATTTGGTGCCTCCTCGACGCCTACAAGTTCTCCCCGCACCCGTGGAACCCTAG
CACGCCTCCCACTTCCCCCTCGCTCGTCCCCTTCCTCTGACCGCTCGAGGCAGCGCCGCC
GTCGCCACGGCCCCGGCGTAACCACGACTACCGTGCCCCGCTCGCCCTCGATGTTGTCGA
GGAGCTCCGCCATCGAACGCCGCGTCCACCCCGACTTCGAGCGCGAGCCCGCTGCCTCTA
CATCGCCCCCGTACCTCCGTATTCCTCCTCGGGTCACCGCCGCCCCTCGCTGTCGATCCG
ACCGCACCGAGCCCTCCCTGATCAGTCTCAGCACATCTGCAGGACTTCTATAAGCTCATG
CACCTTCCCCTGCTCTTCGATGGCTCGCACGTGCCCTGCACCCCCTAGACAATGTGACTG
AGGCTCGGCTCAGCTCGAGCTCGACGCCGGCGAGCCTCTGGCGAGAAAATATCCCGGGCT
CGTGCCCTTTAGCTCCCACGCGTCGCGCAAGTTCCCCTTAGTCCGTGTGGTAGCTCGCTA
GTGCGCCACATCATATTGCCCACTGTTGCCCGACCATGGCTGCCGCTGCAGCTCAACATC
GGCGCCGCTCCAGGACGCCCCAGCTCCTCCCGCTCGTCGAATGGATGCACGCTGGCCTCC
GTGTCCAAACGAGCCCCTCCGCGCTCGATTTGGCCCCCAATGGCAAATTTTCATCGCTGG
CCCGAGCCCTCCGTCGTGTTTCTGGATCGCCAGAGCTGCCTCGGCCACCGCCGCTGACCT
GGCCGACAAGGGCCACCCGGTCGTTGCAAGTGCCCACCGGGCTGTGTTGACCGTTAACCG
TGGCCAAGTGCTGACTGGGCAGCCCCGAGCAGCCGACTAGTGGGCCACCACCCCGTAGCC
ACTAACATGTGGGCCCAGGTATAATTAGCCCCTAATTAAACTATTAAATTAATTAAACTA
ATTAATTTGGTTAAATAGACACTAACATGTGGGCCCTGGTAGTTAGATTATTTAATTAGA
TAAAATAAACTCTGGAATTAGCCCTATGTTTATGACGGGTGGGGTCGAGCTAACAGTTTG
ACGAGTCAATAGCCCTATTGACTGCTGACATCATCATGATGGCATGCTGATGCAATAAAG
ACTTTTTCAAATTAAAATAATTCTGATAATTTGTTAAAATGATTTACAACTTTGAAAAAT
CTTATAAAATAATCTATAAGTTAGATGAAAATAATTTGTACGTAAAAGTTGATTAGAAAA
ATCCCACGAATCCAAATACTTTGTGCGTTCATGTGTCACAAGCTCCTAACATGATGAACA
TATGGCGTTAGGATTATCTGTTCGGTAGTAGCCACAGACCCGGGAAATATCGTCAGATAT
TTTCCCACTCTCTGCATGACGTGCAGTACTGCGTTAGCTCATCCCTAGCAATGCATATTG
CCATGTCATGCATCGTGATGCATCTGCTTGCTATTATTTATTGTTCTTCCCCCTCTTCTC
TCCTGTAGACGCTGAAGTTGAGGCTGTTGTCGGGTGCGACAACCCCCTGACAACCAACCT
TTTGTAGTAGAGCGACAAGGCAAGCAAACCCCTTTGATCATCCCCATATCGTCCATTCTT
TCTCCCTCATGCTTGCATTAGATTTTGCTACTGTTATAGATAGCTCTGATCCATAGCCTG
TTTTTGTTAAAATCATATTGTACCCTACTACATATTAAATGCTTAGTATAGGTGGATTAG
TGGTCCCTAGTGACCCCAGTTAGTCGCAGTTGCCGCTGCTTCGTCATCGAAGACTCGACG
ACATTGAAGACTCGAAGACTCCATCATCTGATTGACAAGCCATGACACATCACATCACCT
CACACCCCTTAGTTGTACGAATCTGCAGAGGTACTATCGAGTACCGAGGGTGATACCTTG
TATTGTACTCCTGATGTTAACTTTGTAGTGTAGTTAAACGGAAGTGGATTACGATGGGTG
ATTCCTCCTTCACCACTTCTGATAATTACTCTGTCGTGCAACCCCTCAAACGTGAACCAT
CGAGGGTGATTCCTCTCCGATCACCTTAACGGTTACATCGATTGAAATCCATCAAGGGTC
ATTCATCTGATTCTTGTGATGTTACAAACACACGGTTACTTTCACTTTCTCGCGTGGTTG
TGACGAGGCATGGCCAGGAATTCTTGGCCCTTGCCACACATCCTCGAGACGAGGCAATGG
GACCACATATCGTGGATCACTGATCGTCACAATAGTTGACAAAACATTAATGGGATTGGG
AATTTGATGTGAGTTGGTCGTTTGACCTATACACACTAACCTTCACGCAGGGACAATTAT
GGGCACTCAGCGTCGCAGTATCAGCCGAAGCTCTTCGTACATCAGCAATGGAGTGGCGCA
CGCCCGAGTAGTCTGCGTAATCATTTATCTTGTATAAGAGGTGGCAGGACTAGTCTCGGC
CGCCCTCACAACATGCAGGAGTGTAAAGAGCAATGAGCCCAAGACCCGTGCACGCTTAGG
ATGTAGACGAGCGGGCTGGACTCTCTATTGAGCCTAGGTAGGTGATACGTCTCCAATGTA
TCTATATTTTTGATGGTTTTATGCTATTATCTTGTGAAACTTTGGNNNNNNNNTATGCCT
TTTATATCTTTTTTGGGCGTA