morexGenes - Barley RNA-seq Database

Contig contig_58675

Source Contig contig_58675

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_58675 (2361 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_58675

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_70851	1	1068 bp	AK250035.1	Available	Available	None

CDS Structure of MLOC_70851

Contig Sequence (2361 bp)

>contig_58675 2361 assembly3_WGSMorex_rbca.fasta
ACCCCAAACAGTGCGCTATAGGAACTGCCCGAAACGACAAAACAACGAGTGTCTGCGACA
TCTCGATAGCCGTGCACANNGTTCATGGTGCATCAAAAATTGACCTTGTACCCCAAAAGA
GTGCGCTATAGCGCAAGAAACTGGCCCGGAAGGACAAAAACAACGAGTTTTTGCGACATC
TCGATAGTCGTGCACAAGGTTAATGGAGCATCAAAAATCGATTCGGGACTCCAAAACAAT
GCGCTATAGCCCATGAAACTCGCCCGAAACGATACAAACGACGAGTTTTTGCGATGTCTC
GATAGCGGTGCACAAGCTTCATGGAGTATCAAAAATTGATCTGGGACCCCAAAACAGTGC
GCTAGCCCATGAAANNNNNNNNAAAGGACAAAACAACGAGTTTTTGCGACGTTACGATAG
TCGTGCACAGTGTTCATGGTGCATTAAAAATTGACCCGGGACCCCAAAACAGTGCGCTAT
AGATCATGAGACTCGTGAGAAACGACAAAAACAACGAGTTTTTTAAACATTTTGATAGCC
GTGCACAGGGTTCATGTAGTATTAAAAATGGTCCCGGGACCCCAAAACAATGCGCTATAG
CCCACGAAAATGGTCCGAAATAACAAAACAATGAGTTTTTGCGACGTCTCGATAGCAGTT
CACAGGGTTCATGGAACATAGAAAATCGACCAGGTACACCAAAATAGTGCGCTATAGACC
ATGAAACTGACGAAAAACGACAAAAAACATGAGCTTTTGCGACGTCTTGATAGACGTGGA
CACGGTTCATGGTGCATAAAAAATCGACCTTGTACACCAAAAGAGTGCGCTATAGCCCAC
GAAATTGGCCTGAAACGACCAAAACAACTAGTTTTTGTGACGTCTCCATAGCGTTGCACA
AGGTTCAATGGATTTTTATATTTTAGTATGGAGATGACGACCTTGAGCCTAACAATCTGT
GTACTAGAATCATACTAGCAACGTTGATGACTGGCGGCGTTGTTACTTCTCGAAGAGCAA
GGGCAATTTTCCCTCTCGATCTGCCAACCAAGATCCGTCCCACACCGATGAAAACTTCAT
GTGCAAGCCGCACTTTTCCTTGACAAGAAATTGTTGATTGTAAGTACTAAGTGAAGGGTG
CATGCATCATATGCTGATGCAGAAGCCGGGGTTATCCTTCTTTTTCAAAAAATAAAAAAC
TGTTGAGTGAATCTAACTTTCCTTCTTTTCATTTTTTTTGCACGTGACTGTTGGTGCGTG
AAAGGTAGATTACTTAATGGATTACAACGATTTATTTTGTTTGGGGAAAATGATAGGGAA
ACAATGATGGATCAACCACCGCACTGATTACACAAAGAAGTGTAAGTTATTAGGGTGTGT
CTTTCATAGCAGGTGGGAAGAGAAATGTAATGCACAAACTCAATATATAGTGCTTTTCGA
TCTCGCATGATTTAAAGGAGGAGCAATATATAGTCATCCACTGGAGTGGAGTGGTGCAAC
ACTTGATGGCCTCCGACTCGGATCGTGTTGGTGCGCTCAAGGCCTTCGACGACACCAAGG
CCGGCGTCAAGGGCCTCGTCGACGCGGGCGCCACCACCGTCCCCTCCATCTTCCACCACC
CCCTCCCCCACCTCCACCACTTGCATGCACATCATGAGCACCACTTCACCATCCCGGTCA
TCGACCTCGCGGCAGCCATGGGTGGTAGTGGTACTACTACTACGCCGACGTCCGAGCGAG
CTGAGCTGGTCGCCGCGGTGAAGGCGGCCGCGGAGACGGTGGGCTTCTTCCAGGTGGCGA
ACCACGGCGTGCCCAAGGCGGCCATGTCGGAGATGCTGGCGGCGGTGAAGGGCTTCCATG
AGGAGTCGGCGGGGGCCAAGGCACCGTACTACAGCCGGGATTTTAGCAGGCGCGTGAGGT
ATTGGAGCAACTTGGACCTGTTCCAGTCACCGGCGGCCTGCTGGCGCGACACCTTGTTTT
TCGAGACGGCGCCGGAGCTGCCGGCGCCCGAGGAGATCCCACCCTCGTGCAGGACCATCG
CGCCCGAGTACGCGAGGATGATGCAGCAGCTGGGACGCACCCTGCTGGAGCTGCTGTCGG
AGGCGCTGGGACTCCGCCGTGGCCACCTGGAGGAGGACGCCGCGTGCCTGGAGAGGCTCG
CCGGACACTACTACCCGCCCTGCCCGGAGCCGCACCTGACGCTGGGCACCACGCGCCACT
CCGACCCTTGCTTCCTCGCCGTGCTGCTCCAGGACGCCGTCGGCGGCCTCCAAGTGCTTC
TCCACGAAGACGAAGGCCACGACGGCAACAACAACAAGTCGTCAGGTGTGTGGGTGGACG
TGCCGGCGGTGGAGGGAGCGG