| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_58652
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_70839 |
5 |
1397 bp |
MLOC_70839.3 |
Available |
Available |
LOC_Os01g39270.1, FRAME:-2, EVALUE:5e-174, 13101.m04008 protein NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed |
CDS Structure of MLOC_70839
Contig Sequence (5849 bp)
>contig_58652 5849 assembly3_WGSMorex_rbca.fasta
CAACTGCGCGTACATCGGACGGACCTCCAGGTGGCGGATGTTTACTAAACATCCGTCGGT
AGATGCGTAGCAGCCCCATTTGTATAAAGTTGTAAAGTATTAGAATACTACATCTGCACA
ACTGTAAAACCCTCTTATATTTTGATACCGAGAAACACGCGCTCCCTCCGTTAACTTAAG
ATATTTTTTAATATAAATTATTTTTTGGTTATCCCAATTACAAGCATTTAGGTATAGAGA
AAATAAATATGAACTAAAATGAGTGAACATACACACTAAAATGCATCTATATACAACATC
TTATAATAGTGAAGCGAGTAGTTTCTTTCTTCCAAAAAGGAGGGAGTAGAAGCTAAGCTG
CAACGAAACCAAAAGCTATAAGGTCTTTTAAAGATTTTGATATGAACTACACACACGTAT
GTATAAAATACACATTCATTGATTTTGCTTTATATGTCTTTTGTATTAAAATATTTAAAA
GATCTTATATTTATAAACAGCACTATATAAAAAATATATTTACATACACATGACATATAC
ACATACACACCGTTGGTTTTCTTTTTCTTCCAGAAGTGGTCACCCTTGGTCAGATAGTTG
GTTTGGGACCTTAAATTTGCTAGGTTATCTTTACCATTTCTAACAGCTGACTGCCATAAC
CAAACTTAATTACAAACATACCAAAAATATCGACACCCTTTCCCCTTTTGCATGGTTGAT
ATTCTGCATACACTCACTTTTTGTAAACAAGGCAAAATATTTACTATTTTTATTGATTAA
GAAAAAAAGAGTTGGTCGGTTAATTAAAGAAAATCAGACGAAAACCTATATTACAAAACC
CATGGGGCATCCGTCGATGATGTGGCCACAAACAAGATCACGATACAACTAACAACACAA
CTGTCGAGAGGAAGCACCGAGCAACAAAGCAACGCCAAATAGTCGACCACGACGCCGAGG
ACATGACACCTCCGATTTTGCCAACGAGCTTCATAGGAGAAAGTTGCAAGCCTCGGACCG
AGTCCAACGCAACATCCAAAGATCACCGCATGCTAAAGATCACCCTTGAAGCCATCGTTG
CTGCAGTGGCCCCGTCGCCCGCAACTCCGACCTCTGTGTCACAGCTAGAAACCAGCATAG
ACACCCACTCGCGCACGAGACCTTCGACATCAGAAGGACAAGCCGCGGCCAAGCTCTGCT
CGCTACCATTGTCGTTGCGACACACATCGCAATGCCATACAAACCTCACCGTCGACCGGC
CACCTGCCGACCACGATGATGTACACGTCCAACCTTCAAGAAGCACAAATGGGACCAAGA
AACTCTAAGACTGCGCCCGAAAAAGGAAATACGATGTTGAAGACGTCGTCACCGCCGCCT
GACACAAACAAGATCTTAACTTTCGTCCGAGGAACTTGACCCGAGAGAAGAGGATGCGCA
GGTCACTTCAATGACGCCTTCAAGGAATGAAGGAAGAATGCGACGCCGCCGCCGTCGATC
GACAAGCATCGGCTAAGCTTTTGCCTCAAATAGTAACAACATCACTCCCGCGTGGTTGAC
CATGCCAACCAACACCTCCACTGGCCCGTGCACCCCTGCACAGCAATCGCACCATCATCA
TGCAGGGACCACCACCACGCTTCTCTATCGAGCAAACCACGGCAAGCCTCCGGGCAGGGA
CGAACAGACTGCCACCCCGCACCACCTCGTCGGCCAGATCCCGCACTGCGCCAGCGATGC
ATCCCGAAGCTACAACCCACCGAAGAACCGCTGTCGCCGAGCTGCCCAGACAGGAGAGAC
GAAACCCTGTGTTGGACAATAAGCTAGACTAGCTAGCCGTTCGTTGGTTAGGATTTGCTT
TCCCAATTAGTTTCAGTTAGCTAGGTAATAGGTCAAGTTCAGTTAGCTAGTTAGCCGGTG
GCTAAAACCCCGTCAGACGTGGGCTGTGCGACCGGCCCATCAGACGTGGGCTGTGCGATC
GGCGGGGGAGTAGTTGGCGTCGTGGACTGCAGGCTCGATCGTGGGATGGCGCGATTCAGT
AGGAGCTCGGGATCACGGCACCTTTGCGTTCTTCAGTTAATAAGAGAAAGACCGAAAAAC
AGCAGTTAGTTGTGAGCTGCACAAAACACTCTCTCTCTCTCGCTCTCGCCATTGACAGCC
GAGCTCAAGCTCTCTGGTAATTCTCTAGGTGACACCCTGCAACCCTGCAGCTCGACCGCG
CCGCCGGGAAGACAGAGCCACCACGCGCACCGCTGCGGAAAGAGGAACGCCCCGCCGCTA
CCTTCCCCGGGGCATGCGCGGGCTTCGTCGTCGGCTCCTCTAGTCTAGTGACAGCGATGC
GGGGGAGCATGGAGGCGAGGGCCTTTGGCGGCGGCGCCAGTGTCGCCCCAGGCGACGCGG
GGATCGCGGGGGGATGCTTTCTTCATACACTCATTTTACATTTCTGTGTATATTCTGCCT
GTAAAACAAGCACATATGCATGTCCGCAACAAGAGACAAGATCGGCGAATAGATTTGAAT
GCCACACTCAAACTTGGCCGGCTGAAGTCTAGTCTAGTGCTGCGAGCTCTGCACTTTGGC
CTTGAGCGCCTCAATGACCGCGGAGAAGTCCTGGTCGGCGAGGCCCAACGATTTGGCAAC
CTTGTACAGCTCGTTTGCAGCTGCAGCTGTAGGAATGGGCTGGGACACCGATTCTGCCAG
GGCCAGCGCCAGCCTTAGATCCTGTCATGTTTCAGCAAAGTTTCTTCTCAGTGTCAGATT
AAGACTAGGTGCAACATGCAACTTTCTTTTTCAGTGCTCTGTTTACCTTCTGCTGATGTT
TCAGGGGAAAGGCAGTAGGGTATGCAGCCTTAACCATGGAAGGGCCCTTGAGGGAGAACA
TGGGAGCATTGATAGCACCTTGTGAAATAACCTGTTGGAGCACCCTGGGTTAGATGAAAA
ACTCTCTTGACATATTTCAGGTTATTACTTGTTTCCGTATAGCTACCTCGACGACAGTAT
TCGGGTCTAACCCAACTTTTTCACTCAAGAGTAGCCCTTCTGCAAATGAGACCATCATGC
TGCAGTGTTTCACCGCGAGGATCAGTAAAACCAAATATATGATAATCTCCATCACCATAC
ATAGGATTCACATAAATGAGGTTCCACTTTACCTCCCCATCACCATGTTAACCACGAGCT
TCATTACTGCGCCGTTTCCGACATCCCCAAGATAAAATCTGGACTGCTTTCAGAGTAAGG
AAAACGTAAGTGCACTCTCTTATCAACACCAACTGCTTTTCTTATTCAAGTGCCTCTTTC
TGATTAGAGATGCTAACCTTGCCCATCACATCAAGTAGGGGCGCCACTCTCTTGTACAAA
GATTCATCACCTAGTGCAATCAATCATATCGACAATTTAAGGTGTCAGAAGAAAAGGAGA
TTTAATTACTCCCTCCGATCCATATTACTTGTCACTCAAACGGATGTATCTAGCACTGAA
ATACGTTCAGATACATCCGTTTGAGCGATAAGTAATATGGATCGGAGGGAGTACTAGATT
TCCTCAATGACCAAGAATGAAGAAACAAGTTTACCTGCAGTAAGAAAGATTAGCAGTCCA
TCTTCTGCTGGCTTTTTTGAGCCTGAAACTGGAGCCTACTGAAAAATCATCAACTAAACA
TTGGACCAAGAGTAGAAGCACTGAAATTACATTGCTAGTTGCACATCCACACAACAAAAT
CAACAATTACATACAGGAACAGTACAACCAATGATATGGACCAAAAACTACCTCGAGAAA
AGATGCCCCAGTACTTGTAATACGTTTGCCAATTAGCTTAGATGTTGCATCATCGACTGT
TGACACATCGACATACCTACGGCAGACAAGCAAGACAAATATGATCGAAACATCGACATA
CCTATGACGGACAAGCAAGAGAAAATATGATGTTTTTAAGGTCTACTTCTGCTGTTCTGC
AAATGCTCTGGAATTTTTAACCCTTTTTCTTGAGAGCAATTAGTTAGCACTTACCCTTTC
CCTGGGGCCATCCCTTCTGCGGCTCCATTAGCCCCACATGCAACCTCAAACTTTGAAACA
AATCGTTTATGGACATGATTAGGTATGTTATCATGCCGAGACTTCATGAATAAAAGAAAT
GGCCATTGGAATGCTGAAACGGAACTTATACCGCGCTTTCTGGGTCAGCAAGCATTGCAA
AGGTGACATCACAGGATGATGAAACTCTGGCGGGCGAAGATTCGAACCTGTAGGAAGCCA
TCCTCTTGTATGAGAGAGTCAATCAAACGGAGTGTTGCTTACATCTTTTGTTACACGCAA
TACTGTCTCTTAACTTTGATCAACATCAACAACATGAACTATCTAATAGACTAAATCCAT
TCACACCATAATCTTTGGTCTCTTTCAAGTGGGAACAGTTTTTAGTGGAACTAGATGATA
CCCCGCACGTTGTTGCGGGAATGTTTTGTAATATATTTGGTTATATGGGTATTTGGAGTA
ACAATATGATAACTATAAAAAGAAAATATAAATGATATATTATGTTTGATTACTGTGTAG
TTGTATATTTTTTATTAAATATAAATAGCATAATAGAATGGAAATTCTTATGCATGTTTG
GATGTTGAGGTGGACCTTTTCCCATGCATGTTACATGATGAGGTGGCATGCTTGCATGTT
GATATTAATATAGTAGCGGGGGCTAGCTATCTAGATGTACAAGATTTTAGGAAAATATAA
TGTTTTCAAATAAAGTAGAGCAGAACAAGGTAGTCAGAGAAGAAAAATGTAGTTGTGTTT
ACTAGTGAACATGTGAGAGTTTTATAGTTATATCAAGTTTCAGTTATGAGGTGGTGTGGT
TTCGGCCCGAATCCACGAGCTACAGACAATCCCTCAGGTAGTTGTTTAGGAAATGGCACA
TATTTAATAAGTAGAAGATGGTTGTAGATCACAATTGAGTTGATGTGGAGCATACTTGGC
ACCGAGGCTGAGAAGAGGATCGCACTTGCTCTTGGTTCTGTTCCAAACTGTAATATCACA
ACTGCAGATCACCAGTCAGTAAAAGCATAAGCATAAAACCATACATTCGATATTTTGATC
ACCAGTCAGTAAAAGCATAAGCATAATACTGATTTGAAATGTATAAAAATCCAAGACAAG
AAGACAAGGTACCAAAGTAAAACTGTATGTTTCCCGGTAACAACAAAAGGGAAAAGAAGG
AAGAGAGACAGAAGTAGAAGAGAAGGGAATCACCCAGCCTTGATGAGGTTTGATGCCATG
GGGGCGCCCATGATCCCGAGGCCCAAGAACCCCACCCTTCCCTGGAATCCCATCCCTCCA
GCAGCATCTGAGACGCAAGAAGAATCTGATAAGTACTAGTACTACATTGAATCTTTCAAC
TACACTACATACACAGCTGCGTCTGCTGAACCGAAGAAGGGAGCCGACACCTGACGAGGA
GGACGACGAAGAGGCGGAGCAGGACACGAGGAGGCGGGATCCTCGGCGCAGGGGCAGCGT
CACCCTGGGGCTGAGGAGGAAGCTGGCCGCGGCCATGGATGCAGATAATAAGCGGGATAA
GATTCGAGCTCCGCGACGACGAAGCTACAACTGCTGGTGGTCGCGGATCCGCGGTCGCAA
AAGCGTGATCTGGGACAGCGTGCGAGCCCAACGCGACGCGGCTGCGCCACCCGATCCGAA
CCCCGCTCCGGTTAGAGCAAGTACAAGGTCAGTCTGCACACTGTAAGGATTAAAATGCTA
CTCCCTCCGTTCTAAAATAAGTGTTTTAACTTTGTACTAGCTCTAGTACAAATTTGTACT
AAGCTTGAGACAATAATTTTGAAACGGAG
