Contig Data
morexGenes
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Map Locations of contig_58387 (5594 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_58387

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70697 1 554 bp MLOC_70697.1 Available Available None
MLOC_70696 2 3021 bp MLOC_70696.1 Available Available LOC_Os10g35770.1, FRAME:+2, EVALUE:1e-62, 13110.m03225 protein E2F-related protein, putative, expressed
MLOC_70698 1 1001 bp MLOC_70698.1 Available Available None





CDS Structure of MLOC_70697






CDS Structure of MLOC_70696






CDS Structure of MLOC_70698






Contig Sequence (5594 bp)

>contig_58387 5594 assembly3_WGSMorex_rbca.fasta
TCAACCCCCTAGCGGTACTACCCAACGGCCCGCGGGCGCCCCCCCCGCGCCCCCCCGCGC
GCCCACCACCCCCGCCGCCCGCGCGCCCCCCGCCCCGCCCCGCCCGCATCCTCCCACTCC
CAGGGAGGCCGCGACGGTCGTGGCCAGCCTCACGGTGGAGGAGGCCCGGAAGGTGCTGCG
CGCCACGCAGATGGAGGCGGCGCGCGCGCGGGTGCGGGCCTCCCGCGAGGGCACCGTCAC
CCACGCCGAGTTCCTGCGCCTCTGCTGCGACGCCGCGGGGGCCGACGACGGGCCCTCCGT
CGCGCGCGCTCGACGAGTCCGGATCCGTCATCGTGCTCGGCAGGACCGTCTTCCTCAGGC
CCGAAATGGTACGGCCCCTCCCCTCTTCCTCCCCGCCTCCCATTTCAATACCTCAAATCA
AATCTAATCAATGGCCTGTCTGTCTAAATGTTGCTTGATCCATCCCCAACCTTTGTGCTC
TAGCTTTGCCTTGCAGTTACCGTCTTTTACAGACGAAAAAAAACAGAAACGTTGGTTGCT
CTGTTCTTCTCCTGTTCTACTCTTCATTTTTAATCCGGGTCACCGGGTACCGATTTCACA
AGGCTAGAGATCTGATGAGATTTTTCGCGTGTTTTGCATGTTTCTCCCAACAGGAAATGA
ACCAAAGAAACGGCGGTGTTCTAAAACAATAGAGCAGTTGTGACACCAAAAGTTTGGGGG
ATTTTATCCCCCCGTCCCGTCCCGTTCCGTTCCAAGATGGGAGTTTCCTTTTCTTCTCTC
AAAACCAGGAGGAAAACTACAAATCTAATTTCTACCCCTCGATCTAAATCTGAGGAGGGA
AGAAACAAAACAGACACTCTTGCTAAAAAAACTATCTCCGATGAATGAACATGAGGAGAA
CCTAGCTGCCACTCAGCACCCAAAAAAGAACATGCATGATTATTCTCTATATTCAGATTG
GTTGGCATCTAGTCACCATGCTGATGGTAATGGCTCCATTATTTTGGGAATTGGAATGGG
GCCATCAACCCTACTATTGTTTGAGCACATATTTTCAACTTCATCATTACCATTCATAGT
CATATAGATGTTCATACTGAAGTACTTCACCAGGTTTTCTACTCTATAGTTTAAAAGACA
CATTAGTGAAGGACCATTCCACTAGCTGTTTTCCGGTCTACAATTAGATGGCAGTAATAA
GTAGTAATTGACAGTATGAATCTGCTGTTTGAATTGCATAGTAGAAGATTCAAATCTACA
GTACAGTCATATGTCCGTGGTGGGGGTGGTTTGATTTACCTTTGATCATGTCATGCATGC
CAACGATTTAGTTAGTCACATAGTGGAAGATGAAGTAGTGCTACTACCATTTGCATAAGA
AGTAGTGCCTGTTGTGTCCATGAGATCATCCCTTTTTGGCAATCGTGACACCGGAATGGC
CCATCATGTGGTCTCCTTGTCGTCACTGGTTCCGTTCGTTTGTTAGGGTAAAAGCTATTT
ACTTGCAAAAATATCAATTTTGTTTGGAGATTTTAACCTGCATCTTAACTGCAACAGTGT
AAAATTAATCTTGTGAATGCTATTTGTTTTCATGAGATATGAAGTACCAAAAAAATGGTG
TTCTTATTTCCTGCTGAATAGATAAGCTGCATCCCATCCCATTTGAAAAATAGGAGACTA
ATGCAGGGCTAACAAGTCAATGACAAATCTACTTCTCTTATCTTCGTGACCTTCTCTCCC
AAAAAGTTTTGGGTGGACCTAAACAAAGTTTAGGAACATCATCACATGCCATCTGGTTCA
GATTAGGTCATAGCAGTTGCAGGCAAGACAAGTGGTATGATTTATTGTTTGTTTTTTGCT
TGGTCCCTCCGTGGTCACCAGAACATGCCAAGCTACCCCTTGCAAGTTGTGCCTGTTGGT
GGTGACAAAACTAGTTGTGGAAAATCTTTTTGCATGATTTAGTCTGTAGTTGTATCTGCT
GTTAATAGCCTGTTAACTTTGTCATGGAACTCTTCAACATGGATGCTAAGGCGTGCAGTC
GAGATGTTTAATGCCCAATACTGACTTACAAAAAAAACACTTTCTTTTGGAAGGTATTTG
AATCCACGTGGATGATAGAACCAAAACATTTTGCACCTGTTTTGACCGTCCAATCATATA
CAGTTTGAGTGAAATGTTTTTGCCTTCCAGCATTGCTCTTTCTTTTATTGAAAAGAAGAG
CAGCCAAGTAAAATTTGGAAATGTTTTTGTCCTTTTTGTTAAAAATTCCAGGTTGTGAAA
GCAATTGAGAAGGCCATACCCATACCACGAGGGGTACCTGTCGGAGAGAATGACCCTGCA
AGGGAGGAGCTGAAGGCCATGGAGGCACAGAAGGTGGACATTGACCGCATGGCGACGCTC
CAGGTGCGGCGGGAGCTGTGGGGAGGGCTGGCCGCCCTAGCCCTCCAAACGGCCGGCTTC
ATGAGGCTCACATTCTGGGAGCTCTCCTGGGACGTCATGGAGCCCATCTGCTTCTTCGTG
ACGTCGACCTACTTCATGGCCGGCTATGCCTTCTTCCTCCGGACCAAGAGGGAGCCGTCG
TTCGAGGGCTTCTTCCAGAGCCGTTTTGCAGTGAAGCAGAAGCGACTGATGCAAGCCAGG
GATTTCGATGTCCGAAGGTACAGCGAGCTCCGGCGAGCCTGCGGCCTCCCGGCGCTATAT
CCTCAGAGCCCCTGCACGTCGTCCTCCTCGCAGGAGAGCCACCACCATTGCCATTGTCAT
TGATGTGTGTTGTTTCGGATTTTTTATGCCCCATTTGATGTGGTTGCTGCTTCATGTACC
GTTGTGGAATGTGGATGCGAAGCATACTCATTGACGAGATCAGATTCAGATTTTAAACTC
GAAATGGCCGTGTCCTGTCCTGATGGATGGATGGATGCATCTGAGTCGTGGGGTTAGGCG
AGGGAGGTCAGCGTGTATATACCGGCTGTAAACAATCCATGAGAAGAAGAATGAAAATGA
CGAAGAAAAATTGATCCCATCACAAGAAATTGTCATCCAGCTCATCTGGCTCAACTTGTC
CAAAATGCGTGTTGGCAAGGAATCTTGAGCGATTATTCTCTTTATAGGCATGGTCATAAT
CCATCATCATGGTATCTTTTATTTGTCATGGTTGGGTCTAGCTTATTCTTTAAGAAAATC
AAAGTGATCTCGAAGCATCAAGGGCATCAAAAAAGGCATCTTCAACGGCTACGCCGCGGA
AGGCAGCAGGGCCGTCAGCTTTTTCGTTTGGGCCTGTCCGTCCTTTTTCTCGCTGTCCGT
TTTTGGCCTGTCAGTACGTCATGGCATGATCCCCCACAAAGTCTGGTGGGGTTTCCTTCA
TTTGATGCCTTGTGCTCGTGACCGTCCATTGCCATCTCCACCCACCCGGCTGAAGCTTTT
AACTCGTCAGAGCAACTAGTGGCTGGCACGGCATCCGCACCACGCACGCGCAGCAAATCA
ACACGTACTGGTCCTTCCTTCCGTAGTTAACTGGCCATGCAGCAGATGCAGGAAGTAGTG
GATCTGTGGATGGCACGGCACCGCGCAGCCAGTCCGACTAATTTAGATGGTTTGGGTTTT
ATTTCTAAACAGTATTCTTTGAATTTATTTCAGCCATTTCGATAAAAAGAAGATACAGGT
AGCAATCTGGCACTGCCGCGTTCGTGAAGGAACAATCATAAAGCTGTTGGCCAGCTTTCC
AGGAAAGGAACAAGGAACGAACGAAGGAACGAGCTCCGGAGAGCGCGGTGGCGTGACGCG
CCGAGTTACCGGAACGGGGGTCGCGGAGTGGAACCGGCCGTGACGACGCGCACCCGCGAG
GAAAGCGGCAGTTTCCGCACGCGTCGGGTGAGGCGCCACGTCGTCCGGGCGTGGCTGGCG
CTGGCGGACCAGGCCGGTGCCGTGTCTCCCTCTCTCGCGTGTCGACGCCGCGCCGCACGC
CGCAGAGGATTCTATTCGCGCGGTCACGCACGCTGCCCAGTTTCCCACCCACCCCACCGG
CGACCGGGCGCCCCGTTCCTTGCCGCGCGCCGGCGGCTTCGGTCCAGCCCGGCACCGGCA
CGCGCCACGCGACTGGAGCGCACCGTCGTGGCCGGGAGCCATCTGGGGGAGGTGGGGTGA
GGACGCTGCTGCCGAGTGCCGACCCGGGGAGGGCCGTGTGGCCGTGTGTGGATTATTTTC
GCACTGCAGTCTGGACTGTGGAACACGCTGGTGACACTGACTCGATCCTTGCTCGTCTCC
CGATGTATATCTGCAGGACAACAGCGACGATGAGTACGTATTTGCTGGTACTAGATAAAC
CAACTAGGAAGGCAGCATCATGAACTCAAGCTTGTGAACTTGTTGGAAGCCGGGCGGTGA
CGCACTCGCTTATGGGGCAATGGGACATGGCATCTCGACCCGCTTCATACTCTGATTGAT
ACATTCTAGTTGCGCTGTTGTGGACCGCTCACCTGTCCATTGTTCAAGTGCTCACATGCT
AGACATGCACCACTGTTCGTACCTAGTGTCACAAGTCCATATGGATGTGTTTGATTGCGT
GCATACATGTCAATCAATTTCAGGCGATAAAAATGCCACCCATCTGATTACATGCATTTA
TTATTGGATATGCATAGCATGAAACTCAAAATACCTTTGATCTGTCTCGTTGCTACGTTC
GAATCAACGGTTTCTTCAAAAACCAAGCCCTTGTGATGCACGCAGGCGGCGGGGGCTGTA
CGGGAACGACCATGCTCGAGAAGCCGCATTGCTTTTCGAAGCATCGTCATTTATTTTTCT
CACCTTCCCTCACTCACGGCGGTGGCGACGTTCAACAGATCGGAGAACAGCAAGGCGACC
TACATCCCATTCACCGGCATCCACAACAGCACTTTGGCAATGACGGTAAGCACTTTCTTC
ACCTTCTCACGTACTATTTCACATTCGATCCGTGTTTAAATTTGATCTGCGTTAGGGAAT
GGGGAATCGGGGTAAATGGCCATAGGAGTGATCATGACATCGTTGTGAGTCCGTAGTACC
GATGGATTTGAGGTTCGCGATCCGGATCGAGTATAGGAGGAATGGTGATTTGGAGTTAAT
CTTACACAATAGTCTCAAATCTTAGCTCGGCAACCCTGGAGGCGGTTGGAGCGATGGGTG
CCCTTTGCCTTGTTCTTCTCGTTGAGCTGCACCATTGTCTCTTCTTCCTCGTAGGAGTCC
ACATCGATTAGCATGCTTCGGTATCCTCGCTTCGACGCCCTTACAACCATCGCCACCGCA
CCACATCATCTTCTTCTACCTCCATCGGCACCTAATGAGGACATGGCTAATGTCGGATTT
CGGGCTCCGTAGAACCCTAAGGATTCGAACACAGGGGCATGTGCGTAGGTTCCTCCCTGC
TTCACCCCGCCTAGCCCGCAACTCGATGGTAACAGCAAAGAACTCATTCGAAGGTGAGGA
GGACACATAACACATCAGTTTACCCAGGTTCGGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGGATTGCCTCTCTCGGAGGTTGAGGAACGAGATAGTATAGTGCTTTTGTG
CCTCCGGAGGCCAA