| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_58380
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_70693 |
4 |
1910 bp |
MLOC_70693.3 |
Available |
Available |
LOC_Os12g41930.1, FRAME:-1, EVALUE:3e-79, 13112.m04389 protein SRP40, C-terminal domain containing protein, expressed |
| MLOC_70734 |
6 |
3209 bp |
MLOC_70734.3 |
Available |
Available |
LOC_Os01g02570.1, FRAME:-3, EVALUE:0.0, 13101.m00199 protein protein kinase domain containing protein, expressed |
| MLOC_70692 |
1 |
1186 bp |
MLOC_70692.1 |
Available |
Available |
LOC_Os10g41330.1, FRAME:-2, EVALUE:3e-31, 13110.m03852 protein AP2 domain containing protein, expressed |
CDS Structure of MLOC_70693
CDS Structure of MLOC_70734
CDS Structure of MLOC_70692
Contig Sequence (4422 bp)
>contig_58380 4422 assembly3_WGSMorex_rbca.fasta
CGTCATCCACGACAAGATAGTCCATGGCAACCGGCACCACGGCGATATCGACAACAGTAT
TTGGCTGGAGCGCTGCGATGGCGTCGGCAAGAGGTTGCAGGTGATCTGCATCAGGATGAG
AAGAGTTGACATGACAAGATTAGGGAGGTGAATGTTAGGTTTAATCTTGTCATGTTCATG
TATCTATATGTTTGTTTAGTGGACGTGACGGTTGCTGCGACGACGAAGCTTCAACAGAGG
CGTGCGAAGACGGCGAGATGCCGGACTGTCGTGTGATGCGGCGAGCAAGGCGAGATTTCT
ATGTTGTCGTGCGATGCGGCGACGCCGTGAGAAGAGGCAAAAACGCAAAAAAGACTGAGG
CTTGACGGACTACTTCATATTTAGTCGGGTGAGCCGGCCAACTGACACGTGTAGAGGGGG
AGAAGAGAGAGAGAAAGCTGCGAGAGAAAGCAGCAAGGAAGAAGAAGCGGCGCCTACATC
TCTATGGCTTCTCCCTATTTTGACAACATTCGATCCAACGCTGGCAAAGGACCAGTGAGA
ATAGGCGCTACCAAATTTGCCGCGTCTCTTCGAATTTTGGTAATTGATGTGTGTATCATG
GAAAGCAGTTGGCTGGATTTTGATGCGATGACTTTGACCTCTTCTCTTGGTTTCTTATGT
GGCAAGGTTCGTTTTATCCATTCTTCCAATTTATAGTGAAGGATTGCAAGCATGTGATGC
GTATTGTGTTGTCCAGTCAATGCCCAGTCAATGTTTCTCATGCGGTCTACTAGATCTCTT
CTGTTTACAGCGAGTGGTTATTGAGGACTTCAAAGGTTTAGGTATTTAGATGTAGTAGTA
CTCTCGAAAAAAAGTTTTAGATGTCAAGAGCGTTTGCAGGTGTCATTTATCATTATTGCT
TTTTCATGCTTCGACGGGTGACGAGAGGAAGAAGACGATCATTATCGTTTTTGGCATAAA
TTTTCTTTTCACAGTTTGTTCTGTGACAAGTTGTTATTCCTTTGTAGTACCCCTTGTTTT
CTTTGGATTAGATGCCCATGTCATTCACGTGTCTTTAAAAAACAGCTTCGTACTTTAGTT
TGCAAATTCCATGTCATTGACAAATCGCTGCTGTAACCAAAGAACGAATGAACGAATGAA
TTTATCGTAGTAACGACAGATTAATCAAAGAACGCCCTGTGATCCAACCAAATTCAGGGT
TAAGCAGAGGGCGCTCCCCTGTCATGCATGCGGCACGACAGGTCTAACAGGCCAGTAGCC
ACCCCTGCGCGCGCGTGTCTGGCCGTCGGCGGTCGGCCGGCTCTGCTTAGTTGACGGCCG
AGAGCTGCGGGAAGGCAAAGAGCGGGTACGGCGACAGCGGTGAGAGGGGCGGCAGGCTGC
AGATCACCTTCAGCTCCTCCCAGAAGTCGGCGTCTCTAGCTGCAGCGCTGCAATTCGCCG
CAATTGCACTCTCCTCCTCCTCATCCTTCATCAGCTGCAGCTTCTCCTTCTTCACCACCC
TCAGGCGCTCCTCCTCCTGTGCCGGCCTCATCCTTTTGCCGCCGGTGTGCATGGCGGCGG
CGAGGGGAGCAGCCGGGACCCACTGGATGGATTGGGTGCCGACCTCGTTGGGGAAGTTGA
GGATGGCCTTGGACCCGCGGAGGCGGAAGGCGGCGCGGTCGTAGGCGCGCGCGGCCTCCA
CGGCGTCGTCGTAGGTGCCGAGCCACACGCGCGCGCCCTTCCGCGCCGGGTCCCGAATCT
CCGCCGCGAACTTGCCCCACGGCCGCAGCCGCACGCCCCGGTACCGCCGGAAGTCGTCGT
CCTCCTCCTCCTGTCCCTCCACGTAGCCGCAGCTCGCTTGCTGAAGCTGCCGCTCCAGGA
CCATCGTCGTGGCCGGCTTCGACGGCAGCGACAAAGAGAGCGCCGGCCTCCGCCGCCCGG
GCGGCGACGAAGCGCTTGAATCGGAGTCGCCGCTGCTGCTGGCGAGGGCGTCGGCGTGGA
GGTCGTCGAGGAGGTGGGCGCGGATGAGGTCGAGGTGCCGGTGCGTGAACGCCATGGTTG
CCGTTGCACTGACCTGGCTGAGAGGGAGGAGTCACCGTCTAGCTCGTGCGCTGGTGTCGT
GGCTGGTGGCTGGAGTCTGGAGAGAGAGCTCGGGTGCGTGGAGTGTGGTGGTGCAGTCCT
CCTCCTGTGCGGGTGGTAATAAAGGGCAGGGGATAAGACGGGTTCCAGGAGACTTCTTGG
GGGGCCGCGCGAAGCATGGGACGATGCGCTCGTGCTGCACTGCTGCTCTTGACTCTTCTT
CCTCGTGGGTTCGGCTCGCGGCGCAAGTTGTCCATCGCTACCCCGTGCCTCGACTTCAAT
TCGTTCGGCGCAGACGGAGACCGCCCAAATTGGCTAGTTGATCTGGCGATTTTTTTTCCT
TTCCAGCTACAGCAAAATTGGGGTGGAAGACCAAAACATGTGGCCAGAGAGAGAAAACGT
AGAGACCCTAGCCTTTGCATTGCGTTGCAGCTCAAAATTGTTGGACAACCCGCATTGGCA
TTCGCGGCTCTATTGTCCACCCATGAGCCATTGTGACATCTTCATGATGTCGCGACAAGA
GCATGAGATCTGGTCTTTGGCGGGGAGAGCTTGATCAACTGATGACCACAATGTTTTATG
TATTCCTTCGAGAGTTCTTTTTGTAAAAGTTGGGAGCAACTACCTTATATTATGTCAGGG
TGTATAGAAAACAATATGGTCGGATCATATCTATACCTATTAATAAAAGAAATTAATATT
TTTAATTCGTCATGCTTTTTTTTAGAAAACCCACTTAAATTTTTGGTAATCAACCCGCAG
TACGTATTAATTGATTTTTTAAAAATCTATATCTTTTCATGCTAACTCTAATCTAACATG
TTATATATAAAATTTGATTAGAAAATATGTAAAATCAGAATATTGTATTATTTTACGTGT
TCACCATTTAAAAAATATTATTTACGACGAAACCTTAACCAATAACGCACGACCAGTCTT
TCCTTCATATCGGTGCCGATCTGAATTAAAAATGAACACTTCGGTAAAACTAGGATGGGG
AACAAAAACAATATCTATAATCACGCATGCACGCCTCGTCAAAACTTTACAAAATAAATA
AATTATCATCTTATGCCGAGAGGGAGATGTCTTAAGATTGATAACATTCATGATGGTGTT
AATACTAAGGCCAGGGTCGACGGTACTGGGAAGAAGGGTAAACAGAAACACAGAGGGGAT
GCCATGTGTTGAAATAAAAGACATGGACCTATGAACTCGTTGTTAATTAAATTAGTGAGT
GTTTTTCCCACCCGTCTGTTGCAACGCACAGGCTCTTTTGCTAATGAATTTTAAATGTAA
TATTCTCATTGTACTAATTTGAGAATTTTAATTTGGTTCTAGCTGGAGACAACGGGTTCC
CCTCTCACACAAACAAGAACTATATTCTACATCTTGCACTTTCACATTTAGGTGAATTTT
AAACCATAATAGCATACATCTCTAAATAAGCAATCTGTAATATACCTCGACATATGTCAA
ACCGGAGCCCGGCCAAAAAAAGTCCGATGCTAAAAAACTTAAGCCCGAGCCCAGCCAGGC
CCGACCGCCGGGCCTAGTAAATCGGGTCGGAGCCCTCACATGGCCTGATTGATCCGATCC
GACTATTGGTAAAATTAAGTTTTCCACAAGCCCGAGCCCTGCCCAGCCCGAACATCCGTC
TCAATTTTGAGGCTCGAGCCCGGCCCGATGGGACGAAAGCCTGGCACAGCGAGATTCTTC
AAGTCAGGTCGGGTCGGGTCGTCCAAGACGGGCTGACCATGGTCAGGTATAATGTACACT
AACCTACTTCTCTTAAGGTGCAACCATGATATGTCAAACATTTGAACATGCACAGAAAAA
GTTCACCGCAGCATGCAAACATACATGCAAAAATATTTAGTCATTTCTCTTCATTTTTAT
AGAAAAAAAATTAGTCATTTCAATTTCATTATACTACTCCTTTCTATCCTAAATCGACGA
CAATTAAGATCATCTCTAGCAGACCTCATAAAAACGTAAACTATAAAACTTGAATACGGG
TCAAAAAAGTATTTTAAGGATCCATTTTAGCTATGACCGAACAAAAACTGTAAAACAAAC
TGTAAAACTGGGATAAAGAGCTTCTTCCTCCGGTCCCGCACCGCCGTCCCTTCCTCCAGC
CGGCCGTGCAAGCCATGCCGGCCGTGTCAGCCACGTCGGCCGCGTCCAACCCCGTCGGAA
GCGCCCCGTCGCCCGTCGTCCATGCCTCGTCCCCGTCGGTCGCGCCCCATCACCACGCCC
GTCGTCCATGCCTCGTCCCCGATGGCCGCGCCACATCACTACGCCGGTCCCCTCCAGCCC
CGCCGGCCATGTCCCGGCGCACGCCTCTACTGGCGTCATGCG
