Map Locations of contig_58375 (3792 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_58375

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70690 4 2435 bp AK372853 Available Available None





CDS Structure of MLOC_70690






Contig Sequence (3792 bp)

>contig_58375 3792 assembly3_WGSMorex_rbca.fasta
CAGCATAGAGCGTGGGCGCCCAGGGCGCAATGTACGCCGGTGCCGGCATGTCCAAGACGA
TGGCTTCGCTAGTTCTGGTTGGGTCCTGCCATCCACCTGCCGTCTCCTAGGCACATATGA
GTGGAAGATACGTTGGCCCGGGCAGCCCTGGAGATGCAGTCTTATTCGGAGGCGCCTGGC
AACGGCTGTGACGCGGCCTTGAGGCTCTGAGTCTAGCTACCTCGCCATTCATGTTTGGAG
GCTGGACAAGGCAAGAACTTTTGTCATTGCGGTCTGTAGTTGGTAGCACCTCCTCACCCG
CTCGTTTGGTGAGGACGATGATGTGTGTGCGTGTGTCCCTCCTCCTGGGAGGTTGTACCT
GTACTGCTGTTCTCTCCCTGTTCAATGAAATGAAACACAAACTCTTTTGCGTTTTCTCGA
AAAAGAACGAAAAAACATAGAATAACTGGTCAAGGCATTTAAGTCAGACATTTTTATATG
CTATAGGGCTGCATCACAATTATAATTAGAAGACAAAACTGTTATTTGATGATGGCCAGC
TAAAATCATGATCCGACTATCTAAGTCTTCCATAGTAACTTGGGTAGAAGATACAAAACT
AAGGAACCATGTGCACATATATGGACACATGTACATACTGTCCAACAGGGGCACTAGTCT
ATTCTACTAATACTTTTTTAGGGCTTAGAAACAATGGCATATAGTTCTCACCAAGAATGA
GAAAACATAGAATAACTGGTCAAGGCATTTAAGTCAGCCATTTTTATATGCTATAGGGAT
GCATTGCAATTATAATTAGAAGACGGAACTATTATTTGATGATGGCCAGCTAAAATCATG
ATCCGCCTAGCTACATCTTCCATAATAACTTGGGCAAAAGATACAAAACTAAGGAACCCT
ATGCACATATATGGACACATGCACATACTATCCAAGAAAGAAGTGTCACCAGTCTATTCT
ACTAACACATTTTTAGGGATGGCAAACAAGGGCATATATCCTCATTGCTGATGTTTGTGA
AAGCTTACAAACAACTACGCAATCAAAGTTAGAATGTAAGATTATTGCTAATTACTGTAA
TCCATGGCCCTGTTTGGACCTAAAATAGAGCTTATCTTTCTCAGAAATAGTGTGACCTAG
CAAGATTTCTACTCATGTGTCATGTCTAACATATTCATTTGTGTTCCAAACTTATCGGAG
CAACTGAGCCACACACATCCTTAGGAACAATGCATACACCCATAAAACGCAAAACAGCTC
ACTCTACTACCATATATGGATCTAAATAATGGAAAGTCAAGATTACCTGAGCAGGAAACT
TCCCGTTAAATACATTTCTGACAAGGTTTATCCCGCCCTTTGATGTCGCCTTGTACACCC
CATATAGCAGCCTCAAGTCGAAATCATACAGGAATACCTTTGTCCCTGGTCGGACCTTCT
CCACCATCTCCTTCTTCCCCATGGGCATGCCAAACACGCGGTTCTTGAAGCACTCCGGCT
TAGTCTGTGCATTGCACATGAAGATAAGCCCTCCTCCCCTGCTATCACCACCACCCCCTT
CTTTCTTGGCTCCCTCCTCCTTCACCGTCCCCTTCTTATTCCCCTGTGCCTCCTCCTGCT
TCCCCTTTCCCTTCCAAGCCATAAGCCTCTCCTTATGCCCCTTCTTGTTCTTCTTCTTGC
TACCACCACTACCGCTAGCACCCGCCCCATTGCTGGTGGCAGCTGCAGCATCAGCCGGCT
TTGGCTTTGGCTTTGGCTTTGGCTTCGGTTTTGGAGTCGACGCTGATGCTTCTTCAGCGG
TGTCTGGCTTTGGTGCCGGTACCTGGGCAGCAGACGATCCTTCAGCCACGGTGGCTGGCT
TCAAAGATGCCGCAGGCGACCCTCCAGAAGGGGTGGACCGTTTCGGCGCAGATGCAGGGG
CAGGGTCGTCCCTGCCGGCAGCGACCGCGGAGGCCGCCCCATCGGCCGCTGCCGCAGCAG
TGGCCGCGACCTTCGCACCGGTGCCAACGGCTTTCCGTTTCTTAAACTTCGACGCCTTCG
CCGAGCCAGAGCCGGAAGCGCCCGCCGGGGACGGCCGGGCAGCACTGCCGGAAGAGGCCG
CCTTGGCCTTGGCCTTGGCCTTGGGGGTGCTAGTGGGGGTCTTCACCATGGCCGCTCCAC
GGGGCGGGTCGGGGGAACAAACAACGACAAAATCACCGCAAAAACAGCGCCGCGCCCATC
AAAATCGACGAGACATCTGGAAGGAAGGGCAGAACGAAACAGGGGATTCAATTGTGGCAC
GTCCTAGGGGAATCAGGAACGAATTCGTGCGGCGGAGGAAACCCTAGATTGCTGGCCGGG
CGAGACGGGCCGCGGGCGGCGTACCTGGGATGCGCGAAGACGGCGAGAGGCGAGAGGCGA
GCTGAAACTGAAGGGGGAGCCAGCGAATGGGTGGGATGGGGCGAAGAATTATCAGGTTTG
TAGGTGCTTGGACGGCCCGGATCGAGCGAGGGCCCGATGAATAAATTGAAGCATCTCCAA
AAGCCGCGTTATATAAGCGCCGTTTTGAAAAAAGACGCTCTTTTGCACGCGCACAGCCGC
TCCGGTCGCTCCAGCGGAGACGTAAAAAATATGCGCGCGTCATAAATGGTTCAGCGCGCG
GGACGAAATGGCATCGCGCGTCGTTTATTTGAAGCGTCCGCTTCCGCGCGCTGGACAACG
ACGACTCACACGCGGCTTCCACCCACCACTAGGTCCATGTTGTGACACCGCCGTCCGCGC
CACCCCATTTGCTCCGGCGACCCGACGGCGCTACCCCGGCCTATCCCCGCGATGTCGCTG
GTTCCTCCATCTCCCTCTACCCGCTGCCGCCCCTCGCACGCGTCGTTCCTCCGACGAAGA
GCGTCCGGTCGCCCACTGTCGCTCGGCGCCCACAAGGTGTTCGATAAAACGCTTGCAAGG
TTGTATTGCTTCAACTTCACCTTTTTTACATGAATTTGGTGCTTGTATTTTTTAGTTTTT
AGACTAATTTAAGTTCAATATTATAGATGAGTTCGTCATATAATTCTTTCGAAGAAAAAT
TTAATATTCAAGAGGAGGAGAACCTAGCAATGATCCTAGCTATGCACATCAACAAAAAGC
CGAAACACGGTTGTTCGGTTATGGGTCGGCGGAAAATTTGGAGGGATACAATTAATGCCG
ACAACAGATTGATGAGGCACTATTTTGTGGAGAATCTCACATATCCCGAGTCGTACTTCA
GGCGTCGGTTTAGGATGAGCATCGAGTTGTTCATGCGCATTGCAGAGAAACTGGTGAGCC
ATGATTGGTTTTTTCAGCAAAGGAGGAATGCCGTCGGAGAACTCGAACATAACACCTTTC
AAAAGGTGACAACAACTTTGCTTATGTTGTCATACGGTATTCCGGCTGATCTAGTTGATG
ACTATTTGGCCATGGGTGAAAGTGAGGCCATCATGTGTGTCAAGCGCTTCGCGGTCGGAA
TTGTACAAGTGTTTGGTCCAGAGTATTTGAGATCCCCCAATGCTGACGACGTCGCAAGGC
TATTAGAGATGAACCAAGGTTGCGGGTTTCCAGGTATGCTTGGCTCAATAGATTGCATGC
GTTGGAGTTGGAAGAACTGTCCTAAGGCATGGCATGGGCAATTCCACAGCCAAAAAAGGG
ATTCCACTATAATCCTTAAAACGATGGCCGGTCAATAGACTTGGATTTGACATGCTTTTT
TTGGAATGCATGGATCTTTGAATGACATCAACGTTGTTAATCGGACACCACTCATAAATA
AGATTGCAAATG