Contig Data
morexGenes
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Map Locations of contig_58316 (5221 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_58316

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70664 3 3672 bp MLOC_70664.2 Available Available LOC_Os03g52860.1, FRAME:+3, EVALUE:0.0, 13103.m05766 protein lipoxygenase, putative, expressed





CDS Structure of MLOC_70664






Contig Sequence (5221 bp)

>contig_58316 5221 assembly3_WGSMorex_rbca.fasta
TCCGCCGCGACCCAAACCCCGCGCAAATTTGCGTTCGAAATGGGTCGTCCCGGACACAAA
ACGAACAAGATGGGTGCCGGCCGTCTCGCGCTGGGCCGACCGGTTTGTCCCTTTTATCTC
AAACGGACGGGGCCGTACATGATGGGGTCGCACGGTGGAGTTGGCCTAAAAAAATAAATA
TTTTGAGGGGCTAAACTTTTTTACTTGGCTATGAGATGCCCTAAACTTTAATCCATCCAT
GTAAATGACATTTGTTTCACTCAATGAGCTAAATCCATTACACACACACATTAAATTCGT
TATATCCATCATACACACTTTGGAATAAACCTTTGGAACAAACCATGCATTGACATGGTT
ACTACAGTGTGTACGATTAAGATCTTATCCTGATCCCCTAATAATCAAATCGATTTTACA
GGTACCCACCCAACGCACCGTTTACGCGGTAGCCAACGCTAATTAAGCACACACCCTCCC
CTGGGTCCATCTATAAATATCCCGGTTGCTCGTCGAGAAGTCTCACACCATCCGCAGCTC
AGCAAGGCACACTACCACTGCACACAACTGTTTTTCCATCTTAACAGAAGCTAGGATAAC
ATCAAGATGTTTGGCGGCGGTCTGGACCTCATCGGCGGGCTTACCGGGGGCGGGAGCAAG
ACCCGGCTCAAGGGGTCGGTGGTGCTGACGCGCAAGAATGCGCTCGACTTCAACGACTTG
GGCGCCACCGTGATTGACGGCATCACCGAGTTCCTCGGCCGCGGCGTCACCTGCCAGCTC
ATCAGCTCCACCAACGTCGACTCCAGTGAGCACCATCGAGCTCTCCCTTTCACCATTATA
GTACCTTGCATTGCAGTTTCTGACTAGCTCGTTTGATTACGTGGCTAGACAACGGTGGCC
GCGGTAAGGTGGGCGCGGAGGCGGGCCTGGAGCAGTGGATCACGACCCTGCCGTTCATCA
CGGTGGGCGAGAACAAGTTCGGCGTCACCTTCGACTGGGCTGTGGACAAGCTGGGCGTGC
CCGGCGCCATCATCGTCAAGAACAACCACGCCTCCGAGTTCTTCCTCAAGACCATCACCC
TCGACAACGTCCCCGGCCACGGCAAGGTCGTCTTCGTCGCCAACTCATGGGTGTACCCAC
AGTCCAAGTACCGCTACAACCGCGTCTTCTTCGCCAACGATGTGAGCTAGCTAGCTAGTT
CTTCAATCGCCACCAATTAATGGATGCAACGTACTACGTTTTTGCCTGTGTCCACTTATT
TAAGCATGTATGTATACATGTGCGTGCGTGCTTGCGCAGACGTACCTGCCCAGCAAGATG
CCGCCGGCACTGAAGCCGTACCGCGACGACGAGCTCCGGAACCTGAGGGGGGACGACCAG
CAGGGGCCCTACGCGGCGCACGACCGCGTCTACCGCTACGACGTCTACCACGACCTCGGC
GAGTCCCGGCAGATCCTCGGCGGCTCCAAGGAGTTCCCCTACCCTCGCCGCTGCCGCACC
GGCCGCAAGCTCTCACAAACCAGTGCGTTCATTTCTCTATCTTTTTCTCAATTGTTACTA
CGTACCTAGGAGTAGCAGTTTGCTTTGAACTTACGGATCGAAATCCTTGCAATTGTTACT
ACGTACGTAGGAGTAGCAGTTTGCTTTGAACTTACGGATCGAAATCCTTGCATGCAGACC
CCGATCGCGAGAGCCGGCTTCTGCCGCTGGTGCAGAGCATCTACGTGCCGCGGGACGAGC
TGTTCGGGCATCTCAAGCAGTCGGACTTCCTCGGCTACTCGCTCAAGGCGCTGGTGGACG
GGATCATACCGGCCATCCGCACCTACGTCGACCTCTCCCCCGGCGAGTTCGACTCCTTCG
CCGACATCCTCAAACTCTACGAGGGTGGCATCAAGCTGCCCGACATCCCGGCTCTCCAGG
AGATGCGCAAGCGCTTCCCGCTCCAGCTCGTCAAGGACCTCATCCCCAAGGGCGGCGACT
TCCTCCTCAAGCCCCCCAAGCCACAAGTCATCAAACGTACTCCTCATACCTACTTACTTA
TATTTTCGTTAGTTATTATTATTATTATTCTAACCTACTACCAGTAGTCAACTACTCCCT
CTGTAGCATAATATTTGTTGTTGGGAAGAACTAGTTTAGTTCTCCCCAACAACAAATATT
ATGGAACAGAGGGAGTAGTCATCAAGCGTTGGAAGAAAGATAAATATAATTTGGATTATT
TACGCACGTGCAGAGGACGAGAAAGCATGGATGACCGACGCGGAGTTTGCAAGGGAGATT
CTCGCCGGCGTCAACCCGATGATGATCACCCGTGTCACGGTGAGGCCCAACGATTCATAT
ATCCATCCATCGGCCAGATTATTAGTGCTATAAAATAAAATAAACTAATGGTAAATTCCA
TTGCATTTTATAGGAGTTCCCTCCCAAGAGTAGTCTTGATCCCAGCCAGTACGGCGACCA
CACCAGCACCATCACCGAGGCGCAGATCGGGAAGAGCCTGGAGGGCCTCACCGCGCAGCA
GGCAGTCGCCAGCAACAGGCTCTACATCCTCGACCACCACGACCACATGATGCCATACCT
CGTCAGGCTCAACAACCTCGACGACACCTTCCTCTACGCCACCAGGACTCTGCTCTTCCT
CAAAGGTGACGGCACGCTGGCGCCGGTCGCCATCGAGCTCAGCACGCCTCTGGTCCAGGG
TGGCCTCACCACCGCCAAGAGCACCGTCTACACTCCGGCGTCCACCGGCGTCGAGGCCTG
GATATGGCAGCTCGCCAAGGCGTACGTCTGCGTGAACGACTACGGCTATCACCAGCTGGT
CAGCCACTGGCTCAACACGCACGCCGTGATGGAGCCTTTCATCATCGCCACGAACCGGCA
GCTGAGCGTGATGCACCCGGTGCACAAGCTCCTGCACCCGCACTACCGTGACACGATGAA
CATCAACTCACGGGCGCGCGAGCTGCTCGTCAACGCCGGCGGGATCATCGAGCTCACCGT
CTTCCAGCGCAAGTACGCCATGGAGATGTCGTCCGTCACCTACAAGGACTGGAACCTCAA
CGAGCAGGCCCTGCCAGACGATCTAATCAAGAGGTAATTAAGTTTAAGTTGTTCTACTAT
ATGCTATAGAGCTACTAGCTAGTATGAGAAGAACCGTTCTTCAGTCAGTGACATGACATG
GTATGTTGGTGTTAATCATGAAATGCAGGGGCATGGCGGTGCGCGACCCATCGAGCCCAC
ACAAGGTGCGACTGCTGCTTGAGGACTACCCGTACGCAGTGGACGGGCTGGCCATCTGGC
ACGCGATTGAGGACTGGGTGACAGAGTACGTGGCCATCTACTACACCAGCGACAGCGTGC
TCCAGGGCGACGTGGAGCTGCAAGCCTGGTGGAAGGAGGTTCGCGAGGTCGGCCACGGCG
ACCTCAAGGACGCGGCATGGTGGCCGGAGATGAAGACGGTGGCGGAGCTGGTCAAGGTCT
GCACCACCATCATCTGGACCGGGTCGGCGCTGCACGCCGCCGTCAACTTCGGGCAGTACC
CGTACGCCGGTTACCACCCCAACAAGCCATCAGCGAGCCGTCGTCCGATGCCGGAGCCAG
GCACCGAGGAGTACGCATTGCTGGCCCGCGATCCAGAAAAGGTGTTCATCCGCACCATCA
CCAACCAGCTGCAGGCCATCATTGGCATTTCTCTGCTGGAGATCCTATCCAAGCACTCCT
CCGACGAGATTTACCTCGGGCAGCGTGACACGCCGGAGTGGACGTCGGATGCCAAGGCGC
TGGAGGCGTTCAAGCGGTTCGGCACGAGGCTGGAGGGCATCGAGAGCGAGGTGGTCGCCT
TGAACGGAAACCCCCAGCTCAAGAACCGCAATGGACCGGTCCACTTTCCATACATGCTGC
TCTACCCCAACACCTCCGACCACACGGGCAAGGCTGAGGGGCTCACTGCCAGGGGCATCC
CCAACAGCATCTCTATATGATGAGATGTGTGGAGGACGGCCACAACTGTAACATGCGAAA
ATGTTGAGTGGTTGGCCAAGGGTTAATGTATTTTCCTTTTAAATTTTCCGTTCCAATTTA
TATATTAATAAAGTGAGTTTTGTATCTTTTATGTGGAACAAGTTGGAAGTTTTATTACCC
GACCTTCCAAGAAACAATTCCTTCCTTAATATTATAGCAAAAGGGTTCATGCGTTGCAAC
GGGAAAAAAAATACCACATACTCTAATTTTACAAAAAGTGATTTATAAAATTTGAGTATT
GGTGGCTACGATTCAAACAAAGATGATCTTAGCCTAAAAACGCAGTTCAAGATTTCACAT
GTCTTCTATTTAAATACGGTTTGCATGTAGATTTAATACGTACAAAGAAATGGTCAAGTA
ATCTTCAATTTCGTCTGTAATTCTGATTTCGCTGAGATGTTCATCTACAATCCGAATCGG
TACCGCTACGAAAGAAAGACGGGTAATACATCCTAGATAGTATTTTTAAAACTGTTAACA
CGTAAAATAACACCATATTCAGATTCTACATATTTTCTTAATCAAAGCCCATATATAACA
TGTTAAATTTAGAATTACGGTTTAGAAGATATGGGTATTTTAGAAAACATTTCATATGTA
CTCCGGGTTTATTGTCAGAAACTTCAGGCGGTTTTCTATAAAATAGCATGATGGACTAAG
AATATCTATTTCTTTTATCAGTAGGTATAGATTTTAATTTTCATTTCTTTATTTAACACT
GGAAAAGTAATTTTTATTTATTTTTAATGACGAGTCTAAATTGTATGTCTTTTGTGACAC
TTCTATTCAATTTTAGTCTAAATGATACACGAAAAGACTCTTTTGCCTCTCATATGATAT
GTGTATGCGTGAAAGGACGTGGATGTCGCCTAAAGGGGATGAATAGACGATTTATAACAA
TTACGGTTTATGCTTGAATAAATGCGGAATAAAACTANNNNNTAATTAGTCAAGCACAAA
ACCTAAAATAACTAGGCTCATCTATGTGCACCAACAACCTATGTTGAGTAAGCTAAACAA
CTAAGTGATAGCAAGATATATAACAAGCAACAATATGGCTATCACAAAGTAAAGTGCATA
ATAAAGGGTTCGGGTAAGAGATAACTAAGGCACGCGGAGACGACGGTGTATCCCGAAGTT
CACACACTTGTGGACGCTAACCTTCGTTTGGAGCGGTGTGCTAGATTGGTGAATTGTTTT
G