morexGenes - Barley RNA-seq Database

Contig contig_5828
Source Contig contig_5828
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_5828 (7779 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_5828

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_70646	2	3826 bp	MLOC_70646.2	Available	Available	LOC_Os06g49320.1, FRAME:+3, EVALUE:0.0, 13106.m05270 protein glycosyltransferase, putative, expressed
CDS Structure of MLOC_70646

Contig Sequence (7779 bp)

>contig_5828 7779 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCCCACTGAAGCAACAGTGATTGATGGAGCTGCGCTGTCTGTCT
TGGATCCAATGCTATGTTGTGCTTAGGCTTCGGGGACCAGGGCCTCGGGTCAGTGGAAGC
GAACGAATTGATCCGGATCCGAGCAAGTGCGTGCGTGCGTGGCTGGGGATCTCATCTCAT
CTCATCTCACTAGCCACAGTAGCTCGTTGCGAACGATGCTGGTTTTCTAGTTTGTCTATT
GGACGGGATGTCATGGATGGGCGGCAGCTAGCCGATGGGATCGGGGTTGTGTGTTTTACA
GGACACGAAACGTGCACCCCGTTGCTTGTGACGAGCACCGTCTGTCCGGATCATACAGCT
GGTAAGTAAGTGGTATGGCATGCTTCCTCTCGCCTTCAAGATTAGGTAAAGAGCAGCAAG
AGCGACGGGACATCCACTGGATGGATCAGGCGTGTAGCCGAGACATGTAGTAGTACGTCC
TAGCCTGCTTTTTCTCCGGTCTCAAGCTGACAAGGAACGCCTCCTCCTCCTCCTCCTCTA
CTTACTTCTTTCCCGTTGCATTATCACAGCTACTAGTACTACTTCGGTGCAGCCATGTTG
ATATGCATGATACACCAGATGGCGTGGTTCTGTCGCCGGGGGTCCGTACGGGCCCAGGGA
TGTCAAAGATGCGCCAGCATTATGTGACCGTGATTTGCATGATCACGCGAGGCTTCACTG
ACGAAGATGAATGAACCCGGCGAAGTCAATCCCGTCTGGTCGCGGGCGGTTGGGCAGGTT
CCGGCAATCGCAAGGCAGCGCCAAACCAAGGAGAGCCCTTGCAGTTGCCGGAGGAGGACA
CAGCACGTGCTCGCACGGACGCCGCAATCACACAACCAACGCGCCACGACCTGCGTGCCA
TCTGCCATGCCAGCATTTCTTGGTTTGGCGGACGCCTGGCTGACACGGACGAACACGCTT
GTCGTCCTAGTTCGGCGGACGCCAGCCGAACTCGCCGCCGCCGTGGAAAACCGCGTGCAT
GGACGCGCTAACCCGGCCAGCGTCCTCCTCATGGGCCACAGCACGCCATTCTCTTCTCTT
CGCACCGACGGTTGCCTCTTGCAAGTGAGTGACAGCATGGGCCGTGTCGTGATCGTAGGT
AAAGGAGGAAGATGTGCTTCAGTTTCAGACAGGCATCAACGCGGCCTTGGAAGTTGCCAG
GTTGTCTCGGAGAGCCAACGTGAAATGTACTGACGTGAAGTGCAGACGAGAAGTAGCCAG
GACAGGAGGCTTTATCCGAGTGCAGCCATCCCCGGCCAATCGGCGGCGAGGGGGCAACGC
AACGGCCGGCGGGTCCAGCGTCACCGGAGTGGTTGCCGTGCCGGGTCCCTCAGGTCAGGT
GAGGCCGAGCCACACCCACCAACCAACCTCTCAAGTCTGAAGTCTGAACCTCCTCCGCGC
GCTCCATCGCCATCGCCTCCACCAACCACGCCTTTAATACCCTTACGCCGCACAGCTCCC
CCGCCCGCGCTGCGCTGCCGCTCCCACTCCATCTCCGGCGTGCCAGGCCACCTCCTCCAC
CACCGGCGGGCGCCATGAAGCAGCCGAGGTCGCGGCAGGAGCCGCGCCGGATGGGCAACT
CCGCCATGGTCGTCACCATGCTGCTCTCCCTCTGCGTCCTCACCTTCATCAAGGCCCGCT
ACTGCTCCACCCCGTACCGTACGTCCATCCCCATTCCTCCCTCCATCCCCTTGATCCTCG
ATCCCTCCGCGCGCTTCCCAACAAGGGATGCTTGCTGAATGATGGCGAGGCCGCTCCGCT
GACCTCGACTGCTCCGTCGCTGCTGTACGTGCAGCCAACAAGCCGGCGCCGCTGCTGGAC
CTGGAGGCGGGGATCGACGAGGACTACGACAGCAGCCGGTACAAGATCTCCGGCCCCATC
GGGGAGGAGGAGTTCGACCCCAGCCGCCCCACCTGCTACAACACCAGCAAGCGCTCCGAG
CGGTGCGCGGCGGTCGGCGACATCCGGGTCGACGGCAACCACTCCAAAATCTACATCAGC
CCGCTGGACAGGGTGTGGCGGACCAAGCCGTACGCGCGCAGGCACGACGCCGTCGCCATG
GACGACGTCCGCGAGTTCGCGCTCCTCCCCTTCGGCGGCGGCAACGACAGCGCCGTGCCG
CCGCTCTGCACCAGGAACCACTCCGTCCCGGCCTTCCTCTTCTCCAGCGGCGGGTTCGCG
GGCAACCTGTACCACGACTACACGGACGTGCTCGTCCCGCTCTTCACCAGCACCCACCAC
TTCGGCGGCGAGGTGCAGTTCCTGCTCACCGACATCAAGGACTGGTGGCTCGACAAGTTC
ACGCCGCTCTTCCGCCAGCTCTCCAACTACGACGTCATCGACGTCGACAACGACCAGGAG
GTGCACTGCTTCCCGCGCATCGTCATCGGCTCCACCTTCCACCGCCCCATGGGCATCGAC
GGCACCCGCTCCCCGGGCGGCGAGACCGTGGCCGACTTCAAGCGCCTGCTCCGCCGCGCC
TTCCGGCTCGACCGCGTGGTGGCATCCCACGACGGGTCGGCCAGCCTCGGCAAGCCGCGG
CTCCTCATCATCTCCCGCAAGTCGTCCCGCCGGTTCCTCAACGAGCGCGCCATGGCGCAC
GCCGCCGCGCTGGCGCAGTTCGACGTGCGCATCGCGGAGCCGGACAACCACACGGACATG
CCAAACTTCGCGCGGCTGGTGAACTCGGCGGACGTGATGATGGGGGTGCACGGCGCCGGG
CTGACCAACATGGTGTTCCTCCCGAGCCGGGCCGTGCTGCTGCAGGTGGTGCCGTTCGGA
GGGCTGGAGTGGCTGTCCCGGGTGACCTTCAAGGACCCGGCCAAGGACTTCGACGTGACC
TACATGGAATACAACGTGTCGCTGGAGGAGAGCTCGCTCAAGAACCTCTACCCCAAGGAC
CATTTCTACCTGCAGCACCCCTACGACGTGCACAAGAAGGGATGGAACGCCATTAAGACC
GTCTACCTCGACAAGCAGAGCGTCCGGCTCGACCTCGCCAAGCTGACGCGCACGCTCGAG
CACGCGCGCAGCCTACTGCCCTCCTCATCCTCGCACTGACAGTGAGCTCTGCTTGCATCA
CCCTGCAAGTTCGGTTTCTCCATGATAGATTAGGCCCTCTTCTTCTCTCCCATGTTTGGT
TCACTTCCCTCTTCTGATTTGTTGTTGTTGTTGTGGTGGTGGCAAAGATTCATTTCTTTT
CTTTTCTTTTTTATTGGTAAAGGAGGAGACGAACAAGTTCGTGTCAAGCATAGCCCAAAG
GTTAATTTACACTCTGTAAATTCGATTGATTGTCCCAGCAGCCAGCACACACATGCAGAG
AAAAATGTAATTATTTGCCCACATGGGGACTGAGTGATCGATCTCTTTGCTACTACACCT
TCAGAGACAGGGCATGTGAACAATTGAGTTTGAGTGTGATGCTTTTCTGGTCCCAAACTG
GATTCATCATGCATGCCATGCCCCACCCATTGTCAACAACATATTATGCTTTAAATTCTG
ACCAGTTTCGGAGGCTTCAACTTTGTTCATACTTTTGGACCAGTTGAGTAGGGGGTGTAC
GATAGTTGAGGAGGACTTGTACGCGAGCGGTCGTTGGAGTAGCTTGTGGCCTAGAGCGGT
ACTGTACTACAGAACAGAAACACTGTCGCTCTCCACACCCGAGGTTATCTGAAGGCACTT
GCAACATTTCAGACAAAATGCTTTCATTTCGGACCAGTTTCTGCCTCTGAAGAAAAAAAA
ATCGGACAAATTTCAGAGGCCTCGGCTTTGTATTCATGAGCATCTTAAGGTACTTCAGCT
TTATATACTTCAGACAAGCTTAATTAGGAGCGTCTGCTTTATATTTCAGACAAGCTTGAT
TGGGTCTTGGCTATAGTTTTCGGAGCAGCTGAGGAGGCTTGGGCTTAGTTTTCGGAGCAG
TTGAGGAGGCTTGGACCTTAGCTCGAAGCACCTATAGTCATATAAATGGTACGTACTACT
ACTCGCTAGCATCATGTCGTTAGAGTAGCTTAATTGTTTGCAATGTTAGATTAGAGTAGC
TTAATCATATGCAGTACTGCTGTGATATATCCAAGTCCTTTAGCCCCATAGTTTTATCTG
AAGAAAAAAGAAGAAGAATAAACACCTTTCTAAAACTAAAATGCGATTAGAGTAGCTTAA
TCATATGCAGTACTGCTGTGATATATCCAAGTCCTTTAGCCCCATGGTTTTATCTGAAGA
AAAAAGAGAAGAATAAACACCTTCTAAAACTAAAAGGGCCCCCTCAAAATAAAATAAATA
ACTTAAAGGACGCACCGGCCTTGTGCTAGCTAGGTCACGCACGCACCCACGCATGCACAC
ACCGGAGTCCGGAGGTAGGGGAAAAAGGTCTTAAACTAGAAGCCAAGGCAAGCCACCACG
AGGAACCCAGCAGTGGTTGTCCCTCTGTTCTCCACACGGGAAAAGACTGTCTACGCAGTG
GCCACGACAGAGCACCAACCTAAAGTTAATCAGTCATCGGTCCCTTTTCCTCTTCTTCTT
CTTGGATTAATTATTGTTGCGAGTCAAGTTACCTGCATAAAACGTGATGATTAGATGCCA
ATATACTCCATCGGCCCGGGAAAACGCCGGTACAACCGACGATCATCAGCGGTATCAATC
AGATAAGAACCGTTTAACCCTACGCGGTTATCAGCTAGGTGGTGGAAACAGCTCGGCGGC
TTCCACGACGATCGATCGGATCCGGATCCGGATCGATCTCCGCCACCAGATTTCTGTTGG
CTCCTCGCCGTCCACGCACGCTGAGCGTTCGGCTAGTAGATTATTAAGCCATACGGTCCA
TCCCCCGTAACGCAAGCAAAGTGTTTGGCAACTTCTTCTTCTGTTTTGCAGTACAGTATA
CAGTATGTATGTGTGTGTGTATCTGGATGATGGCTCAGTCCTGCCGTCCGTCTGCTGCGC
GTCCACGCAAGAACGGGGGACCGTCTACGGGTCTGAAACCGGTTTGGTCTCGGCTGCAGT
GCGGCTACAGTCTCTGCGTACCGCCGATCTGGTGGATTCCAAGGCTGGAGCTTCATCGTT
TCATCATGCTTGCACGCACTGTGGGTTGTTCTCGCTGTTTATTTTCAACAGGGCGGGCGC
GGCGGTTTGACGAGGACAACAGCAGCAACAAAGAACAGGGAACACGCACGCAGTCTTTGA
AAAATGAGCAGCGGCTGGTTTCTTCAAGCGGTCAGAGGCCTCTGTCTTGTCTCTGCTTTT
GTCCGGCTCAGCCCTCTGACCTTGATCACAGCCACGGGCCGTGCCTAAACCGGCAGGCGG
CAGCGCAAATGTAGCTTTACGATGCCATCAGTGTGTTAGGTGCCTTGACCTCGGAGCACG
TTGTGGTGCCGATTAAGTGCGCCTGGTCCTGTGCGTTAGGCTTGGCAAAAAGGCCAAGCA
ATGATGCCGTGGTGGATCGATGGTATTAGCATGTGTGCATCCAGAAGCTCTGCTCCTTAT
CCGGCCGGGTTAGCTGCCCGCTGCTTTACATTACTACTGGTGCTTTACGTGCCGGAGACT
TCTGTTCCAGCAAGAGGGCGACACATCACACACGTATGGGGCCAGCGATACCATGTTGAG
TTCTTGATAATCCTCTGAGGGGCATGCATGTTGGACAGTGAATCGATCTGAACTTCGGTG
AAACAACTTTCAGGCTTGTTTCCAAACCTGTCGTTTCAGAGTCTCTGTACTCCTTTCTCT
ACCTGAAGAACAAGGAAAATGTTTGCACTGCCTGGCGTTGCCACACTTATTTCACTGTCA
ATTAAACAAGAGGTGATTCTCTGTTCTCAGTACACATGTTGTAAATTTATACAGGTGAGG
AGACTGTGTCTTGTATTATAAAACGTAGCCGAGGGGGCCGTATCCAACAACCAACTGAGG
AACGTTGGGGTGTGAACATCGGATGCTAGACAAAGGCTTTAGTCAAGATGTACGCTACAG
TAGCTTTGAGTAGCTAAGCTAGAGGACAACGGATTTGGTAGAGCAATGGCAGTGCATGTT
ATGGTTATTAAATGATTAGTGTCCTCTTCGTTCTGAACTGCAACAGTCCGATCTGGTGAA
GGTGGGGAACCCTAAACAATAGTGTCGAGCTATCATCGTAGCGTTTCTGTGCTTTTGCGG
CTTCAGTTTAAGGTCCTGATGGTTTTGTGTCGCCTACTTCTGCCACCATCAATAACTGTC
AAGCGAAATGTGCTTTACTATTTCATTCGTAGACCAAGTGTTTACTGTGTGAAAATGTAC
ATGAACGGAACTCTAAATAAATCTTAATAATAATTCCACTGTCTACTACGACAAGTTTGC
CCTGTTTCGGTGAAGGAGGGGTGATGGCGATGGTACGCCTTCGATTTGCTCCAGTGCTTG
TAGTCATCACTAGATAGTCTACCTAAAAAAAACCATACTTTCTCCTTTCCATCTCGACAA
ATCTCTGTATTTTATCTTTCATTTGGAAATTTCAATCGGCCATACCTTCTAAACTATAAT
TTCATTTTTGCAACTTTAAATGCATTTAAACTCCTGATGCTAAGACATTTTGAACAAGAG
CAATATTGGATAAATTTAAAACACATTTATATTTCAACGTTCCAATCCACTTATTTCACA
CAATCAGTGTGTTTGTCAAGTTGCTTATTCCAGTATGTGCCAATATGTGATGCATATTAT
TTGAAATATGTGATTTTTCTGTTTCATTGTGCGAAATAGATTATTTTCAAATATATTAAA
CAAGTATGTTTCATTTACGGAACATATATTGCTTCGTTCAAGTTGCTTATTCCAGTCTCT
AAATATATATGAAACATGTTATAAAAAAATATGGAACACGTTATTTCAAAAAATATGAAA
TTGATTGTTTCAATGAGTGAATTTGGTTATTTCAAGTATATGAAAGTTGTATTTTCCAAA
TATATGATACATATTTCAGTTCATTTGTCAGCTAGATTTAAGAATAATGTGTTTCACACA
TTTCCAAAACATAACTCGTAGCATAGATTTCACATACTTAAAAAATCTAATTTCAATCAT
TTCATATATTTTAATTATTTCAGAGAATTGAAATATGTCTTTTTAATTCAAAATGAGTGG
AAATCGGGTTTTCAAAATTACTGAAATCTCTTTTCAAAACATGCAAAACATGAGTTTTGA
AATGGGTGGAATTGTTTTAAAAATTGCTTGAAATATGTGTTTTAAAGTAAGTGAACCATT
GTTTTAAATGAGTGATATTAGTTATCATGAGTAAAATTAGTTTATGAAATTATTAAAATT
GTTTTGAAAATGAGTGAATTGTGTGTTCAAAATAAGGGAAACCAATGATTAGAAATGAGT
GAAATATGTTTTTTAATGACTGAAATTAGTGAATTCGTTTTTATAAATAAGGAAATATGT
GTTTAAAAAAATTGAAACTAATGTTTAAAAAGGCATAAAAATAGTTTTCTACTAGTGAAG
TAATTTACTTGAAACTATTGTGTCAAACTTATTTTTACGATATAGCTAAACAATTTTATG
TTTTATGAAAGTTATTTCGCAAATAATTAAATTATATAAAATAAAATGTGGTTAAAATAT
ATCCAGGATTGATCTTGTTCTAAAGGCGTTTTTACCAGATTTTAAATGTAATTTTTTTTT
GGAAAATGGACATTTTGTTTAAAAGATAACAGTCATTCAAAATAAAAGAATGAAATAAAA
TGCATACCATTTTGATGGGAAGCGGGGGGGGGGGGGGGG