morexGenes - Barley RNA-seq Database

Contig contig_58267
Source Contig contig_58267
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_58267 (8379 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_58267

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_70636	3	3715 bp	MLOC_70636.1	Available	Available	LOC_Os02g35080.1, FRAME:-2, EVALUE:0.0, 13102.m03801 protein T-complex protein 11, putative, expressed
CDS Structure of MLOC_70636

Contig Sequence (8379 bp)

>contig_58267 8379 assembly3_WGSMorex_rbca.fasta
CCGTATGAAGGGAAACTCCCACGTACAGTTTGTTTTGGGGGGGAAGGAGCCCGACAGGGT
CCCCCCACTGACTTGGCCCGGGCCTAAGTGAAAGTGCAAAAGTGAAGTGGTGGGCCTACC
CATCCCAACCTGGGGTATGCTGGGATTCGTGAACCAACGAACCTTTTTGGAAAATCTGGA
ATAATTTATGAAATTCTTGAACAAAAATAATTTCTAAAAAACTAGAACTCATGAATATTT
TTTTGGATTCGTGAACATTTATTATTTGTGTTTTTTTCTCAAATCCACCCTTATTTTATA
TATGAGAAGAATTTTTGAATCCACAAACGTTTTTATTTTGGAACATTTTCAAAATTACGA
TGTTTTTTGAATTGGATTTTTTTTTAATTCATGAATATATTTTGTATTTTGGAATTTTTT
TAAATTCAAACTTTATTTGAAACCCAAAACATTTTTTAAAGAAACAAATAAAAGGAAACA
AAAGCAGTGTAGCATCGCCGAGCATATGGGCCGGCCCAAAGCTAGTGCAGGGGAAGAACA
CGCACATGTTTCCTCTCTATTCCTCGGGTAGATCGGGGAATAGGAGGTCATGTGGAAGGA
ATCGAGCATGAGGGCCGACGCCCATGAGGGTGTCTTCATGCTCCGACGCCCATGAGGGTG
TCTCACTCGCGTATTTGGACTTTTTAAGGCCTTATACAATGTAAGATGCTTAGGGAAGAT
GCTTAGAGAAATAAATCATTTTTTGTTAAGCATCATGCTTATTTGTGGACCAAATCATTA
TTCTGACCTTCTCATCGATCTTTCTCGCAACTGAACTCGACATGAAAGTTTTTCACGATC
TGACCCTTTTAGCAACACTATAGCCCGTGGAGTTACTGCCCAACATAGAAACGTTGAGCT
AGATAGCGTTTCTGCCGTTGCCCTCTGCCAGACCGAAACTCTATCTAGCTGGACGTTTTT
ATGTTTGGCAATAACGCCACGGGCTATGGCATTGCCAAAAGAATGAGATCGTGAAATGCT
TTTATGTCGAATTCAGTTTATGACAAAAATTATTGAAAAGGTTAAGAGAGTGATTTTGAA
TGACATATGCAAAATTGTTGAAAAGGTTAAGAGAGTGATTTCAAATGACATATGCTTAAC
TAGGCATCCTTTCTATAGAAACATGCGTCGATACTTAAAAAAACTCAGTTTATTTTATCA
TACACATTACTAAACACCTTACACTGTATAAGGCCTAAGCATCTCCAACAGGTGTCTTAT
TTTAGGGCACTAAAGAGTGATTTTTAGGGCACTTAAAATTGTAGTCTCGAGCCATTGCCC
TATTTTAGGGCACTCAAACATGCTAAAAAATATATATCTTAATGAATATCTACACTACTT
AATCATATTGCATACTTCATCACTACAAACTTCCAATATTCATGGTTTTTATCATGCAAC
TGTCTAAAAATACAAACATCCGAACTTAAACATAGTAGAGTACTCACACCATAGACACTA
GACAACTACTCCTCATCCCTCTCACGTGCAAGCCCCTCCACTCAATGTCGGAGCCCTCGT
TAGAGCATCTATAGCCCGACCCTTTAAATTCGGCCCTTAAACATTCATGGACGTATCCGG
ACGTGTTCATGGACACTGATTGGTTACGTCTTAAATAATTCATTTTGCATCCGTACATCT
TACATTAGGATTCTCAAATCCATACAAAAACATACAAGAAATGAAATATATGTACTACGT
AAAACCTATTTGAGCTACACTATAACCGTTGGGTTCACTTGAACCCAACGAATTTTCCTA
CCATCGTACTAGTAAACTAATATTTTTTGTGTATGAACCCAGTAAAATGGCAAGGCTGCA
CCCATCGAAGCTTCAATGTGCATCTGTGAAGCCTTTTAATCTACTCCCTCCGTCTCAAAA
TAAGTGTCTTAAGTTTAGTGTAATTTTATACTAGAGCTAGTACAAAGTTAAGACAATTAT
TTTGAAACGGAGGGAGTATTTAATTCTCATATATTTTAACGTGACTGGCACAACTAAAAG
ACCACACAAGTAGCGTGGGAATAACCAGATTGATCTAGGCTAGGGAACAATGCTTTCAAA
AGAACAATCAATAACCGAATTTAGATAATGATGCGAAGCACTTTAAGACAACCGTTAGAT
GTGAAAAAGTGCATTAAAATGTTTTTGATGCAACTAGTCTCCAAAAAATACTATTGAGAG
CAAAAATAATTTAGAAGATCTGCCTTATGATTCAACTAATGTGAAGAGAATGTCAGAGCA
CACAAGTAATCCTAAGAAGATGAGGTTAGACCGCTATATGTGGTAAGTGATAATTTATTT
TTATGGATTATGTTGTCTTTTAGCAGTATATTTGTTGGACTTTTTACACTTGATTAACAC
ATGCCAAATCCCCATAATGAGTTACTTAGTGAACCCAATGACCAATTTTTCTGGCTCCGC
CCCTGTGCATGGTTGAATGTTATGGTGGATTTTATATAGAATAACTGTACAAAAAAGCCA
GCGTCTGGACCTTGGACAAACAAAACAGGACTGTTCCAGTAATCGTACAAAATAACTATT
GCAGAAATTTTCCACCGGGGATGCATCGCGATGTGTGACCCAGCGGCTATGATCACCCAC
CCCGGATTCACAAAACCAGCAAGACATTTACAGGAGACGACTGTACCACGGGCCATGAAC
CTGCTCTGATATTGTTGCTACTTTGATTAGCACTTCCGCTGCCTTCACTACGCGGTCGGT
GAGCTTTGTCGCCCCTATGCGCCCCAGGGCCGCCTCGGCGAGTTTCCTGCCCTTCGTCCC
GTTGCCACCCAGGGTGATTGCACGGAACGTGCAGTAAACAGATCGAGACACCTTCCTGAA
GACAGTGTCATCAGTCTGGAGGCTTTTGAGGAAGACCCTGCTCAACATCTGCTTCCTGTT
CTCAACCATTTCATCCGAACAAGGGCCGGCCGAGGTCGATGAACGGACCATCACCTCGAT
GATCTTATCTGTGCCAAAATCAGAAAAACTGCCTAGTAGCTCCGTGAGCGTGCTGAACAG
TTCCAAGCTTGCATTTTCCAGTTCTGAGGGAGAGATCTTTGAGTCCTCGCTCATCAATAC
TTGACGCTGGACAAGCGCGCTGTAAGAGAAACGTAACTAGGTTCAGTCAATGCGTTCTAG
TGCTCTGATATTACATAATGATGAAGAAAAAATAATATTTCACCCAGTTGCCATAACGAT
CACTTGTTGGAACTGACTCTGGACACCACGCAGCCTCAACCAGTTGAGTTTAAATGTCTC
GGGTACTGAGTTTCTTTCCAAGCCCTCCATCCTGCTGACAAGCTGTAATAGCCCAATCCT
TACTAGCCTGTCGAGTATTTCTCCCGTGCACTCTGGTAGTAGCTCTGTACTTCCTGTTCC
ACATTATGAAACGTGGTTAACAAACTAAAGCTAAATGGCCAGCATAAAATTAATGAGCAA
ATACCTGCTACAGGAACTGTAGATTGTTGCTGATCTGGAATTCCACGACCAGCTCGGAGG
GTCGTAACCAATGGCTGAACCTGTTTATGAAAGACAGGTGTAAATTCAATCAACAGCAGC
AAATGAGAATCATAAATGCTTACGATAGTGTTGCTTAAAGCAGCCCATAGGGGTCTGTAG
CTTAATCAATAACAGCGGGTAAAAACTGCAACTACTCCCTCCTTTCCGGATTATAGGGCT
CAAATCTAAAATCTCATCAACCAAGGTGAACTGTGAGTGGATGACACTAGTTTTAACTAG
CCAATGAAATATTTCTCACATATTCAATTTCCGATGCAATAAATGTAGGAGCTGTTCGGC
AACGCTCCAGCTCCATAAAATCTGAAAATCTGTGGAGTATCTCTAGTCCAGCTCTGCAAT
TTTTACATGCGGCTCCTCCAACTCCGGGAGTGGAGATGCGGAGTGGAAGTCATCCGAACA
GGCCTGTAGCATCCTCCTTCTCATTGGACTTGCATGGTGCATGTAGAAAAAGATGCATGC
ATAGCCACTAATTTCTTTTCTCTTATCTCTATGAATTAAATATGCCGTGAGACTCAAAGC
ACTTTAACTCAATTAGACTCAAAATGAGCGTAATATAATGGAAATCTGAAGTTTTTGAAA
CGAGCCCTATAAACCGGAAAGGAGGGAGTACTTGACCTATTATTACTGCTAGGCTGTGCA
TAGTGTTTACTAAAATTTAGGAATATGAAACTAACATGGTCTGTTGCAGGCAGGATCTGT
AAGGAGCTGACATATTCATTCCATTCTTCTTCTACGATATCCTTTGAGGTAGAAAGCCAC
TGAATAGTTGAAGTGAGAGAAACTAATGCATTGGAACGGGATCCATAGCGATCGGCAAAA
GATTTCTGCAGGTACTCGACCCCACCTGAGCCCTTTATAATTGGTTTCAGTAGTTGGATT
CGTGCTCTACTGACTTCAGACTGAAGATCCTGTTTAGTAGAAAATATTTAGTTTCTGAAT
GATGTTATAGTTTCACTGTATAGCCAGTGTAAATTATTCCAAACCTCGAGGTAGTATTAA
GGAATAAACAAACCTTTAATTCTTCCATAGTGAACCGCAAGCCCTTGATGACAGCTATTA
TGAATGCATTTGGACCTCTATCATGAGAATCAGAGTGTTCGATCAATTCATTCAATAATT
TGTCATGACTGATCTTCATTTCGTCTTCCTTTGCAGGAGAAGATAGTTTACGCAGCATAC
CCAGAGAGTACTGCAGAATCTGCCCCAAATATTGTGTGCCTTGGGTGCTCGAGCTCGACT
CAAGTACCTTTCCACAAGAAAATGATTTGTTGGTACCAGATGTATTAAATAGATTCAAGA
TAACACTCACTCAGACTCTTCTTACCTGGGACAAAATTTCAAGGTTAATATTGTTTGTTA
TTTCTTCTTTCCACCCTTTACTAGCCATCTGGTGCAATGCATCCCTGACTTCCTTTACTA
GGTTGACCAGATAACTGTAGTCTGGTGTGTCTCCTTTCATTGAATCCACAACCACATCCC
AGAAAGCTTTCTCCATTGTTTCTCTGACTTGTGCCTGAGAGTAAAAAAGTGGGCAGCTGA
GAAAATTATATACTCCCTCTGTCTCAAAATAAGTGTCTCAAGCTTAGTACAATTTTGTAC
TAGAGCTAGTATAAANNNNNNNNNNNNNTTTTGGGACGGAGGGAGTAGTACTTAACCGGA
GGTGCATCTTACACTGAAAAAGATTCACCCTAGATCATGGCATTTAAGTTCCCCTAGACA
CTCAAAGCTGACACAGATTCTCTACAATGATACATTTTGGTTCTTAGATTACCCCAGATG
TGAAGCTCGACAGTAATATTCTAATATGCGATAGGGCCTAACCTTGAAATCCCCCTCAAC
TTTACCAACATCATCAGAGCTATCAGAAAAAGAACCATGCAGAATCTCATTGACCATTTG
TTCATTCTCTGTTGGCAGCTTTTCTGGCACCGTTCTGCTCATTTGGCTGCTGGTGACCTT
GTCTCCTGAGTTACTTTCAGATGGTGAAGAGGAAGCTTTGAACAAATATCCGACAAGCTC
ATTCTCTATTGGCAGCTTTCCTGGACATATGCTGCTCATTTGACCACCGTTGCCTCTAGT
GTTACTTTGAGACGTTGAAGAAGAAGCCTTGGACGAAGATTGAACAACTCTACCTAGCCT
TTCAGCATCCTTGTCCAAATTATCTTTAGCGTCAGAAAGAAGAGACTGTCCAGAAAAAGA
TGTGACATTTGCATCTGATGTTGCCAAGGGGCTTCTATTTTCCTTGGCTCCAATAAACTT
TGACCTTGTTTCTGATAAAGCAAGTTCCATCCTCTCAATACCAGCTTCACCACCTAGGTG
CCAAACCTTCTCCCTTAGAAGTTTCTGGTCCACCATAACCTGGACGACAAACAGGATTTG
TTTCAGCAGATGTTATACTTATGAAGATGTCAAGAAAAGAGCATCGGGGTAAATAAACTA
AATGTTAACATTCTAGAATGTTTTTTAGAACGCCCAAGGCTTTATTCCTCAGATGATACA
GTAAAATTCTACAACTGAGATGCATTCTGCAATAGACAAATCATATGCACCCAAATAAGA
CTTGTTCAAAACCAAATCATATGCACCATCGTGCTGCTGAATAGACAAATCATATGCACC
CAAAATTCCAAAAGGGGTATGGCACAACATAAAAAAAAGCACCAATATAGAATTATGAAT
CATACCTGTTTCTGGATGGCCTTCGAATTAATATTAGTATAATTAAGGCTATCTGACCGG
CCTTCGGTAGTTAATTTGCATGTTTGCATCATTGAGAGCTCAAGCTTGCATGCAGCTGTC
ACGAGATCTTCCTCTAGCGACTTAGCATCTTTTGCTTTCCACACCACAAAGTGGTAAAGA
TAAGCACACCAAGCTTTGTCAAAAGAAGCCAGCTGAGATCTGAATTTTGTTCGATCAGCA
GCAATTGAAGAACACTCCTGGTTATTAGAAGATCCAGGAGAGACTGCGCCTAATGTAGAT
TGCTGCAATATGCATGCACCATCTAACCCATCAAGTATTGTCTTCATCAGCAGCTCAAAT
TGCTTCACAAAGTTTGTTGCTGACTCCACAAGTAGTTTCTCTCGCTCGCCTTGTACATTA
AAAACAGCGCTTGGATGACCTAGTATCATGTAAGCACAGAGCACTACCCTTGGTGAATAT
CTAGGTAACTTGCCAGCGTCAGAATTTCTAGTTGTCTTTTTTAGTGTTACTCTAGCTCTT
GCTGCACTACTTGGTAGGATTCTCGTATTTGGTGATCCCAGGTGCTTGAGTAGATGGTCG
ATATTTTCTGGTGTGCATGAACTTGATGTCTCAGAAAGAATAAAACGACTCTCCAAGCAA
TCAAGCAATGCCCTGGTGGTCTGAAGAACTTTTGGAGATTCAATACAGAGAGCTAGTTTT
TCAAATGGTAGAGAATTAGCAGATTCCTGATTTATCCCCAGCACGTCAAAGGCCGCAGCC
AACACCGCTGTTGTCTCCCTGTACTTGTTCTCTGATGTCACTCTTTGCCCAAAGAACCTT
TTTGTCCTCTCCTCTAGCGCAGCTCGCCTCTGCAAGCGAGCATGCAAGAGTTGAATACGA
TTCTCCTCCGCTTGCTGTACCCGATGTTCAACTCTCATGCCAAGCTCCTCCCTTTCCCTG
TTGAACCTCATTTCTGCATCCTTCTTAGCAGCCTGACGCAGCTCATCCAATTTAGCTAAA
CGATTCTGCTCTTTCTCCAAGAGGCTCAACCTACAATTATAGAATTTTCTTGAATGCTCT
TTTTGCGAAAAAAGAATCAAACAACATACTCTACCGGTCTGCCTCTTTTGATTACCTCTT
CTGCTTAGCAGCCACAAGCTTCACTTCAAGGCGCCGCTGCTTGGGATCCTCCCCCTGAGA
TGGCTGTGAAGTACTCCTGACCGCACGCCTTGCTTTGCATGATAATGTTTCATGGAATTG
CTGGAGAGCACAACAATTTATATAAGTAAGCAGTAGCAAACATATATGTTTTACCAGTCC
ATGAAACTTCACAAATTTTACCCCATTTTGGTCATTTCACCCTTCACACAGTTCTCAAAA
GTCAAAAGTTAGTTAGCAAAAAACAAGAGAATGAACTTTCTGGTCATATAAATTGTAATG
GAGACTCAACATCCTTACCATCAGAACCAACCAGGACTCAAACAAACCCTCTTCTAATCA
ATGCAGCAAGACACAAAGCTTTCACGTTTTCTCTACAAAAAAATAACTAGGCAGGGCTCC
CATTCCCACAAAGTTAAGATAAACCTCAACTGCCTTGCAGCTCTAAGATCTGATCAAATA
AACTAACACACGGTGCCAACTTGGCAGCCAATTCGCCAGCATGAAGGTCGACACAGCTCT
GAGACCTGGTGGGTTCGTGGTATAGTTTTTCAAGAAGTTCTTGGGGGTTAGTAAAGAGTT
TTGTTCTTCAAATTCTCAAGGACGTAACTACGTAGCGGCGCCGCATACCCGCGTTGCCAT
GCGGCGGCTGCTAAACCATTCATTAACGCAAGAAGAAGCGATGAGGTCTTTTTTTTTCTT
TTAAAATTTCTTGTCGTCACACAATACACCGCATGCAGAGGACACCAAAGCATAAAAAAA
GCACCTGTCGCTTTCAATCCACACTATGTGCTCTATGCATGCATGCATGTGCATGTATGT
AGGCTGTAAAAAATGATTTATCTCACAGATTAATAATTTGATTGGAGATTCGCCTTCACC
ATTAGGTTCGTCTCGACGAGACCTTCAAAATAAGATCTCATGTTGACATGTTTCGTTGAT
TTTTTTTTCGTTATTCATAGTTGCCACATTTATGTCATC