Contig Data
morexGenes
Links



Map Locations of contig_58255 (5315 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_58255

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70629 1 1739 bp MLOC_70629.1 Available Available LOC_Os11g16320.1, FRAME:-2, EVALUE:7e-11, 13111.m01640 protein expressed protein





CDS Structure of MLOC_70629






Contig Sequence (5315 bp)

>contig_58255 5315 assembly3_WGSMorex_rbca.fasta
GTTGGTTGTTGAGATGTAACGGGGGGGGGGGGGGGGGGTTTGGGGGGGGGGGGGGCTTCA
GGGAGTGGGCGGCGAGGAAGGTTGGTGAGGAGGGTGCGGAAGCACGGTACAGAGGAGAGA
GAGGTGGCGGTGGCAAGTACTGGGTCCACCTCACCCTTTTCCTCCTGGACTGAGCACTGC
CGCAAGGCCATGGTGTGATCCCGCCAGGTGCCTAACTGCATCACTGCGACTGATACGTGG
GTCCACTTCTGCTCAGGTGTTTTGCTGAAAAAATAACTAGTGTACAAATGAGGGGTGTCT
TTTCAGGTGCCATTTAACACTCCCTGCTGGAAAAATGGATGGAAATGTCACACTAGGAAA
AAAATCACACCTACTGTCAAATAAGGAAGATTTTTTTTAGGGCCAAACAGGGAAGCGCAT
TTTTATAAAGGGGCAGACAAGGAATTGTCTCCGTCACCATGGCCAAGCTAGCATACCTAG
GCAAGAGAATACTAGCTAACGGTCATGGGTTAGCTAGGCAAATCCCTTCTTTGGATATTT
TGCCAACAGAAACCAATGACCAATTGATCATGCGCTAACTGACACTTGCTCTATTCTGAA
AATAATAGACTGACATTTGCTGTTGAGGGAAAGCCAATTCTGCTCTCATCCCTTGTGACC
CAGCTGTATCTCTTGCCTAGCAAAGCCAGATTTTATCGAGCTATCAATCAAACACCCAAT
GCTTCGTCATGCAAGGCTACAAGTACTTTGGATCGAAGTGTGCACCCTTTGTTGCTTGCG
GTTCTGTCACCTCACCTCGTAGTTGTTCTCCATGTGGAGATATGCGAGTAAGCAATGTAG
AATGATTGCATATTCTCGGAAAGGATGTGGCAACTGATTTCTGTGACCACACAGACTGTG
GGCAACAACAATGAAATGGTAAAGCTCATAATCATTTATCAACCTTATTATCTGCACTAC
CTACGTAGTAGCAACTCCTTTGCTAAAGGAACCAAACAACAAAACTGAACCGTCCTGATA
TACACACACAAGTCAAACAAATAGCGATGATCCGGAAGAACAAACTAACCAGATCCGATC
TATAGTTCACCTTCCCTAACAATTCGAACCACACAATTCAATGTACCTCCAAACCAAACA
GCTAGAAACTACCTATGGGGGCACGAACTCAACCAAATCTACCCTCTAGGCTCTAGCAGG
ATCCAATCACTAGCTGCTCATAGATCACAGGAACAGGAAGTGGAGAAAACAGATCAGCAA
GCAACGAGAGCTACGACGACGAGATCGGGTAAACCAAATCGGGAGAGAAGCTACCGGAAG
GACGCGAAGCAAACCTGGGAGCCGTGGGCCGAGGACTTGAGGCGGGCGGAGAAGGACCCG
GCGGGGGCGAACCCTAGGCCGGCTCCGAGGTCGTGCTCGAGGGTGAACTGGACGGTGTTG
GACTCGGAGGCGCCAGCCGCCTGCGTTGTGTCCGCGGATCGGCGGCGGGAGGAGGTCACT
ACCGGCGGTGTCGAGGGCGGCCGAGGGGAGGGGGTGGAGGAGGCCCTGGTGCCCTCGAAC
TCGTCGTCGTCGTGGAGGAGCAGCTCGTCCGACTCGAAGGCGGCGGCGAGGGAGAGGAAG
TGGGAGAGGAGGAGGAGGAGGGGCAGGAGCATGAGGAGAGAGCGACGCCGCGCGGCCATG
GCTTTGGGTGAAGGGGCTCAGGCTTGGACTCTGGACTGGAGGAGGGAGATCGGCAGCGCC
GGCCGAGGTGATGTATGCGGGGGAGGAGAGGGAGAGACGGTGCTTCTATTATTTCTCCTC
TTAAGAAGATTTTGATTATTATTTTTTAGGCAGCTTTTTTAGCACAATTCTGAGACAGCT
AAAGACCAAGATTTTGAATTTTTTAAAATGTGTAAAATCAAGTTTATATTTATAAAAATC
TACATATAGGATCACGGGGTGCCCTGTCCACACATAATGACATCCGTGAGAGTGCGAAAA
CTTGGCTAGACTATGTGCTTTATTGTTTGACCCACAACCTCGAAGCAAAAAAGTTACAAT
AAAAACAAAAGCCCGCAAATGAATCTCACTAGTGATTGTGTCATGGCCCCTTGACAACCC
TTGTGGATATCCTGTACTCCTTGCTTCGAGTCAAATGTAACAATGAAATGCTGAAGGAGA
AGATCTTTTGATAGACACAGGGCTTTCCTGTATGTGATAGCCTCGAGTGTTGCTGGATCG
TGGACCCCTGATCGTCGGAGTCGAGCTTCCCAAGTACTTCCTCCGTCCGGACGGAACGAG
TAGTTGCCATGCTCATCACGACATACGAGTGTCATTTTTCCTCCTCTGTTAGGTGTTGAA
ACTCATGCATCCATATTAGATTCACAAATCCCGTCAGAGGTGGTTTTGGCCTTCTTCTTC
GACGGCGTGGGGCAAGCGTGGAAATTTCACACGGGGCACTGCGTTAGGGAGGGGGGACTG
CGTCTCGACGGGGGTGGGACGGATAGAGGCATGTGGCAACGCGGGTAGCATCCATGGTGA
AGGCATGCGGATGCGAGGATGATTGAGGATGAAGATTGACATCTGACCTCAAATAATCAA
TGAGAGAAGTGAGTAATCCCACATATGCATATATAGTTTCTACTTGCTATACACAACCTT
CTTTTTCACTCGGGGGACAAGGGTTAAACTAGGTTCCTCCAAAAAGGTATCTGGTTTATC
ACTGCAAAGGCATGGGTTATTATATACCGCACACACCAGATGAGGAAGAATGTTAGTTCT
GCGAAACTAATCTCGACTCTAAACACTGTCACATGATGAAGGAAAGCTTAGCAGCTCAAC
AGGCATCTCCCTGCTTCGAGCGCTTCAGGTCCAGTCATAGAACTCCATGGGCGAAACGGA
AGTGATTCATCTCGAGCCGTGGTTTGTTCCTTGTATGGTTACATCACAACATGCAGTCAT
AGTTGAACCAGGATTGAAAAGTGAGTAGTATTTCTTCATAACTATTCAAGGGTTTTTTCA
TAACGAGTAAAACAATGGACTCTTACCTGTTTATCCATAGCATGTCTGCAGGAAAAGATT
ACCTCGGCCCATTTGACAGCAATCAATGCATCAAACTTGCCATCCCTCTGATTCAAAGAT
TCCTTTGAAATGACCTTACCTACAATCATATATGGCCATGGGCCGGGCCGGGCCCAAAAA
AGCCCGTAGCGGAAAACTGAGGCTCAGGCCCGACACTACCATCGGGCCTATTTTTCAAGC
CCAAGCCCGGCCCAGATGTTGAAAAGCCTGTCGGGCCTAGGGCTGCGGGCCGGGCCTCTT
CCTTAAAATCTCAATATGTCAAGCCCAAGCCCAGCCCTGCCCCGCTGGCGGGCTCAAAAC
TTAGGCCCAAGCCCGGCCCACGGGCGGTGCTACAATGGAGAAATGCTGGATCATAACTTA
TGTTCATAGTTTGTCAAATAAGCAAGCTGATAAGTGATAACTAACACCCTTTTGGCAGCA
GGGAACATGCAATTTTTAAAAACATTGTCTGAATCCACATGCGTGTTATGCATCCGATCG
TTTCTGCTTGGAGACAGCAAGACCAATAGATCTATAAATGAGGGCGGTGAAATGAAATTC
TGGTGCATAGTTATACATGAAGACTAATCATCAGATAGAAATTGCAGGCAACACAAAAGC
TGAAAGAGTGGCAATACACACTGCAAGCAACACATGTAACTGAAAGTGCAAAAAAGAAAT
ACAAGTGTTGAGTTTTTTTTTCCTAATTCACCATTTATGCAAAAACAACACAAAGTGAAA
GTATTCCAATCTCTCTTAACCTTATACAGAGATTCTTCCCGTCAAACTCAGCGAAGTTTG
TCCAAGAGTACTGGGCACATCCTGAGCAGGTTCCCATGTACTGGATTGCAGAGAATATAA
TACTATTGTCTCAGGAACCATAGCAGCAGCTTGTGCCCTATTAGGGAGCATTGTGGTGTA
TTAATTCCTTCTCCAACCACATAAGTCGTTTCTAGAGTTGCGGCCCCTGCATATCTTAAC
ACATGAAAGAAAGGTTCATGTCAAAATAAATAAATTACAAATATGTTTCTCAGACACTAC
AATCGGAAATCCTAAGCGATGAACACATATGACTCAAATAAAGGTAAGATCAATGCAGTA
CGGATATAATTTCCAGTTCAGCTCCCAGGAACAAAGGCAAGATCAATGCACTAAGGCTAT
AGTTTCTGGTTCAGTTCCCAAGCCTTACATTGTTATAGAACAGGATAACAACTAACTTAA
CTGCGGCATATCAGACAACATGACCAGGACATATGCAGTTGATAAGCTTGGGAAGGAAAA
GAATTTCATTAGATCCTTAGAAATACTCCTTAAGAAAGGATAAGAGAATAAGAGTCGGCA
TGCACCAAACTATTATCTATACGTTGACTAACCAATCAGAATAGTATACTTGTCAACATT
CAGTCTGTATGCTACAACAAAGGCAAGTGTGCTGTTATTTGGATCATAGAAAACTCGTCA
TGACTACCTGAATGCTATTTCCAAAATGATATCAGAACTGCTCTGCAAGCACATGGTAAG
AAAAAAGGGAAGTAACTGGATGTTATTTCCAAAATGATGTCAGAACTACTACCTCTGTAA
CTAAATATAAGACATTTTTGCAGTTCAATTTAAACTGCAAAAACGTCTTATATCTATTAT
GTTTTATTTCTACAAACGTACATAAAGAATCGATTACTTTGGTTCTATTAGGAACCATCT
TCCTTCTTCTGTTCACACAGAAGAAAAGCCTACTGGTCAGCCTAATCATGACCACCTTCA
TATTTTTATAAATGCACACAGATCACTAAAATATAGTTAAATTATTCGCAACAGATAAAA
TTACCCAGTTCTGATTCAAACTACTAGCCAACAACCTAACCGGTGCTTCAGATTTGTAAC
TATGTGAGTATGTTGCGGACCCCATGCTCATCGTATGATTAAAATAGAAACTGAGCAGAC
CCTGGAGTAATAATGTAGTTGCTTCAGTCACCACATCCACGTGGCCTTAGCAGACCCTAT
CTCCTGCAGCCATGTAACACTTGATTCCCAGTACACCCGGAAAAAAAAAAACCTTGATTC
CCAGCAGATGCTTCTATCAACTCATCAATGTGACTATATGAGGGCCTTAGAACGGAACTA
ATTCTATACATATTGCCACATTTGCTAATCAATACATATAAAGTTATATTTCAAGGGATT
CAGCCTTCCTTTGGAGTACTTAAGAAAATCCCTTGTAATTCTAATAAGGAAGTTCATAGC
AATCAAACCGGGAGGTGCTGACTTGCAATTTTAAA