Contig Data
morexGenes
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Map Locations of contig_58245 (4803 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_58245

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70617 1 343 bp None Not available Available None
MLOC_70616 1 1002 bp AK363069 Not available Available None
MLOC_70618 2 2139 bp AK359266 Not available Available None





CDS Structure of MLOC_70617






CDS Structure of MLOC_70616






CDS Structure of MLOC_70618






Contig Sequence (4803 bp)

>contig_58245 4803 assembly3_WGSMorex_rbca.fasta
CCTGGAAAAGCTCCCAAAGCACCAGGGGTTGGTGCTCAACAGCCATCGAACTCCCATTGG
GACAACATTGTCAGTTTTCTAAATTTGCTTATGGATACTCTGCGTGAAAATCATGTAAGC
CTTTCATTTAACTCCTCTTATTTTGGCACAACTCTCCACTAGAAAGGATTTGATAGCTTT
ATCCAAGTGATTCTACTAACCTTATATGTTTGTGCTGCAGGTGCCATCGTTCTTTATACG
TAAGCTGATCACTCAGTTATTCTCCTTCGTCAACATACAACTTTTCAACAGGTAGTTCCT
TCTATTAGAATTTGAGTACTTGGTATCTGTGTCTTAATAATATGCAAGCAACACTCATGA
TAGCCAGTGGCATGCGTTGCAACAGTGATCCCCTAAGATTAGTTGACAAACAATAGAACT
CTTCAACGAATGGTAAAATATTGTTCCTTTTATTTACAAATAGATCACTGTAGCTATAAT
TCTGGGTTGAGGAAAAGGTCTATATGTGACGGAACAAAATAGGATTCTTTGGGTTAAAAA
ATTGTAGGTAATGGGACACTGACCCTTCAGAAAATGCTTTGTTAGTATGGTACAGATAAG
GGACCAGCAGAATAACGAGATTCTACTTTACTTTCAGCCATACTAACAATTTTTTTGTGC
CATCAGTCTTCTTCTCCGGCGTGAATGTTGTACATTCTCCAATGGAGAATATGTTAAAGC
TGGACTGTCATTGCTGGAGAAATGGATTACTGATGTCTCTGAGGAGGTAAGTTGTGCTAG
TTCTACATTCTGCTTGTCTGGTTGGTATATAATTCAGGAAGTGGACTATGACAAACCCTG
ACAATCTGGTTGCGGTCGTTTCATGTCCAATAATCATGTTCCCTTTTTCCTGTTATATCT
AGTCTTTTAGAAAAAGTAGCACTTGGAAATCATCATTTTCTGTGTGGCTACTTATTTTCT
GTTCTGTTCTTCACAAATTTATTATCCGTTTTACTTTTAGTTTGCAGGAACTTCTTGGCA
TGAGCTTAATTATATTAGACAAGCTGTCGGATTCTTGGTAATTGCTTGTGCAAGACGCAC
TTCCTCCGTGCCATTTCTGTTGCATCTTCTATGCCTTGGGATATTTCTGACTGATTACAT
AATGTAGGTTATACACCAAAAAAGGAAGAAGACACTTGAGGAGATCAGTCAAGATCTCTG
CCCGGTAAGACTATGTGCACAGCTTCTGTTTTTACAGTTAACCATCATTTTATTGCAGAC
TATAACCAAGCCCCTTTTCATGTGTAGTCCTTGAGCCTTAGGCAAATCTACAGGATATGC
TCGATGTACTGGGACGACAAGTACAATACCCAGGGAATATCAAATGAGGTATGCACTTTT
AGCTTTGGACCTTTCGTCTTTTAGATTTTGTCTTGCATTATTTGTCTTGAGAATGTTATG
ATTTTACAGGTTGTTGCTGCAATGCGGGAGATGGTCAACAAAGATACCCAGAACCTCGCG
TCAAATTCCTTTTTGTTGGATGACGATTTAAGGTAGCTGTGGTTGTCTTGTTAGTTACCG
CTTAACACACTGTAGAAAATGCTTCTTTCGAACTTGTGCGTTTTTGTTTGCCAAAAGTGG
AATACTACTACCTCTGTACCATAATATATGACGTTTTAGGAGCTCAAATGAACTGCTAAA
ACGTCATATATTATGGTACGGAGGTAGTATGTTTTAAGTGGTTGCGGATTTTGGACTTAC
ATTTCATGCTTGCTTGGTGCAGTATACCGTTTTCGACCGAGGATTTATCGATCGCCATCC
CAGCGATAGATTATGCGGACGTGGAGCTGCCGGTATCTCTTCATCACTATCCGTCCGCGC
AGTTTCTGCTCACGGCATCATGACCCACTGCCTGTGTAATGGAACAACGAGGTCTGGGTT
GCCGTGAAGATCAGTTGAATCCCCAGATTTTTATGGGGTCGCACCCCTTCAGCAATGTTG
TACTGTTGTTTAGTTTTTCTAGAGCAAGTTTGATCTAGGGTGGAAGAGGGGTGTTTGTAG
GGATGCAGTTCCAAAGCAACAATTGTTGCTAGACGCCGAAAGGCCCTGGATTCGTGGGTG
TCCAGTTGTCTTGGCTATCTATGTTGTACAAAGAATACTGTAGAACCATGCCAAAAAAGA
AAGAAAAATACTGTAGAAAATGCGAAGCGGTTGCCCGAAATTGATTACATCTGTGGCAAA
ATGTCTCTGTTTGGTGCAGAGCTTGTCGCACTCTGATGCGTTCTAGCAAAAGTGATAGTC
GAAGACATTAATAGCTACTCCTTAGGCCCGAAATAAACGACTCAACTTTATACTAATTGA
TACTCCGTATCAAAATAAATGACTTTAAAATGATCCGACTTTGTATTAAAATTAGTGTAA
AGTTAAGCCATTTATTTTGAGATGATGGAAGTATAAATTTGAGTCATTTATTTTGGAACA
GAGGGAGTATATGGTGGAGTGGTTGAACATGTTTTAGTCCCTGTACCAAACAATCCGCTG
CAGATGATTCGTTTTGTAAAGGTAACGCTCTCAGATAGCAAATGAAGAAAGAACACCATC
GCTTTTGGCCTGGGATTTTTTTTTTGTACTAACAGCTTTTGCTCTTGGGATACAAAATAC
CGTCACCAAGAAAGAAGAAATAAATCAACCAACAGAATACACATCCTGGTTCTTTCAACT
ATGTACACTTTACACAATTTGGACCCAAAAAAAAAAACATCTCTCGCACGCACGCAAACA
CGCGCGTGGCATCGTTCTGCTCACGCCCCTCTGTCCCTTCTCTGCCTCGGCGAGCCCCGG
CTCTCTTTCCCGGCCACCGAGCTGGCGTACTTGGGCGCCGCGCTCTCGGCGTGCACGGCC
GAGCGCTGGCACTTCTTCCTGGCCGCCGCCGCCGCCGACACGCTAGCGCCGCCGTCCTTG
GCCTCCTCGCCGGCCGCCTTATCGGGCTCGTCGTCGACGAGCTTGGCCTCCGGCGCGGTG
TAGACGAACAGGCCGGCGGGCACGTCGCCGCACAAGCGCATGAGCGGCTCGAGCGAGTCG
ACGACCTCGCGCATGGTGGGGCGGTTCTTGGGCACGCTGTGCAGGCAGCTGTAGGCGACG
GCGGCGGCCTTGGCGGCGGCCTGGTCGGAGTAGCTGCCCTCGAGGCTGGGGTCCATGACG
CGGTGCAGCTTGTCCGGCCGCCGCAGGTAGGGGCGCGCCCAGTCGACGAGGTTCTGCTCG
CGGCCGCGGCGGCGCTTGTCGACGCTCCGGCGGCCCGTGAGCAGCTCCAGCAGCACCACC
CCGAAGCTGTACACGTCGCTCCTCGCCGTCAGGTGGCCCGTGAGGATGTACTCCGGCGCC
GCGTAGCCGTGCGTGCCCATCACCCGGGTGGACACGTGCGTGTCGTCCCCCGACGGCCCC
TCCTTGGCCAGCCCGCAGTCCGACAGCTTCGCCGTGTAGTCCTGCAGTAACATAACCACC
ACACAAGGTCAGAATCACCGCTCGATCGACGTGTGTTAATGGTAATTACTGGAGTAATAA
ACACGTGATGTGCGTGCAGGGTTGTTTGGGTGGATGTGTACCCAACTGTTTCTGCTTGTG
TGGTATTTTGACATTTGTACTACGTACGTGGTTAGATGGAGTGTCAAGTATGGTGGCTGG
GTTAGGTGATCATGATTATATATACTGGAGTAGATGTATGCTGTAGGTGTGGTTGATTTA
GACATGTGCGACTATGTTGGCCGGCTCCTGCAGCCTAGCCTAGGAGAATTAATTAGGAAC
AAGAAGAGGCCAATTTTGTATTATCCTCGAGGGCAGGTACGTACGTTTCCTACCTCCTCA
CACTGACAGGGACATTTAATTTATGCTTGTGCGATCCCGTCCGAGGCATGGGCAATTCAA
CCCGGGAAAAAGGCTACTGCTTCTACGCATATTCAAAACTTGTGCTAGTCAGTGGCCAAC
GGGTAATTAAGTAGTACTAATCGAGATTTAGTCCATGGCTTTGCTCGTTCAACGGATCAA
GTCTTTGAGAAGCTAGATCAACAAAACAAAATAGCAAACCGACAGAGATCGGCCAACTAG
CTGGTTTCAAAACGTGCTGGCACGTACGTACGCAGGAAGCGGGTGAAGGAGACGGTCATC
ATATCATATCATATCATATATACTCGTACGAACTAGTCGTGCGTGCGTGTATACGGAGGA
AATTAATGGAGGTATGAACGGGGATATGATATGCCCGCCGGCCGGAGTTGGTAGGGATGG
GACGGAAGAAGAGCACTGACCGATTCGAGCAGGATGTTGGAGGCCTTGAAGTCCCTGTAG
ATGACCGGCGTCTCGGCCTCGTGCAGGAACGCCAGCCCCTTGGCCGCCCCCACCGCGATC
TTCAGCCTCGTTGCCCACGGCAAGCTCGCCAGCAGATCTGCGCAACGAGAACCATATCCC
AGATCAGCAAACATGTCGGCGGCGCCATGTATACTACCGTGATGGACGAACAAATTCTCA
TGGATGACGACTCTGGTGCAGTGCTGCTTACTCTTGAAGAGGTGGTGCTCGAGGCTGCCG
CGGGCCATGTACTCGTAGACGAGCATGCGGTGGTGCTCCTGGTAGCAGTATCCGACGAGC
TTGACCAGGTGCGGGTGGCTGAGCTGCATGCCGAGGTAGACGACCTCGGCGAGCCACTCT
CGGTGGCCCTGCGGCCCCTCGGCGTCCAGGTACTTGACGGCCACGTGCTGCGGCTGCATC
CCGGCGACCACCTTGTCGTCGAGGAAGCCCTTGTAGACCGGCCCGAACCCGCCCTCCCCG
ATG