Contig Data
morexGenes
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Map Locations of contig_5816 (4593 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_5816

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70556 2 3216 bp MLOC_70556.2 Available Available LOC_Os02g51180.1, FRAME:+1, EVALUE:0.0, 13102.m05818 protein cullin, putative, expressed





CDS Structure of MLOC_70556






Contig Sequence (4593 bp)

>contig_5816 4593 assembly3_WGSMorex_rbca.fasta
CCCCCTGCCCGCCCCAAGCCAGCCTGATCTTCCCGGCGCTCGCTGTCGCTCTCGCTTAGT
TAGATGATATGCATCCGTCTCTACCTGTGTGAATTCCGAGAGAATGCGGTTCCTGGGCAG
ATCGTGTGTGCGATTCGAACTGGCGCGTGGTAGGGTCGTGTGAAAAATAAGAAGCTGGAT
GTTCCTATCCTGTGCAGCACTGATGGCAGGAAGCGATCTATCAGAGAGGATTCGTTTCAC
TATTTGTTGTCCTACTCCTACCATTCTCAGTGAAATGGCTAGCTTCTTGTGTGGTCGACA
ACTAATACCTCAGTTAACTGTTGATGCTGTACCCACCAGATGAGCAGTCAAGTAACAAAG
CTCTTTACTAGGTTTTCTAGTCTTGCATTTTTGTTCTTCCTCAGAACATAAAATTAGAAC
AGACATGTTCCTGTCTGTATCAGCCTTTGCTGTCTCTGATGGGTCAGCAAGCTGCATAAC
AAGGCAGATTGGATCAACATATTGTTAGAAGTTGATAGATGTTTGTATTCAGATGTTCAT
ATGATTGATAATTGCTTGTCATATAAATGTTGAGTCATAGTGCCTGTTGAACTCTTATGT
TGCAGAATGCGGATAGTTGATAGTAAATTACTACAATGAAGAGCATAATAATCTAGTATT
ATAATAACTACTAAGGCCTCTTGCTTTATCACCACACTTTAATTTGTGGATTCTCTTTAC
ATGTGCAGGAGTGCCTACAACATGGTGCTTCACAAGTACGGCGAGAAGCTTTATAATGGC
CTTGAGAGCACTATGACATGGCGCTTGAAGGAAATATCAAAATCAATAGAGGCTGCACAG
GGTGGTTTGTTCTTGGAAGAGCTGAATGCGAAGTGGATGGATCACAACAAGGCGTTGCAG
ATGATCCGGGATATTCTAATGTACATGGATCGGACTTATGTCCCGACGTCCCATAGGACA
CCTGTTCATGAGCTTGGTCTGAATTTGTGGAGGGATCATATAATTCACTACCCAATGATC
CATGGTCGGCTGCTTGACACCCTTCTAGATCTTATTCACAGAGAAAGAATGGGTGAAGTG
ATAAATAGAGGCCTGATGAGGAGCATTACAAAGATGTTAATGGATCTTGGTCCTGCTGTG
TATCAAGATGATTTTGAGAAACCATTTTTGGAAGTTTCTGCTAGCTTCTACAGCGGGGAA
TCTCAAGAGTTCATCGAGTGTTGTGATTGTGGTAACTACCTTAAGAAGGCTGAGAGGCGG
CTCAATGAGGAAATGGAGCGTGTCTCACACTACTTGGATGCTGGCAGTGAGGCAAAGATA
ACTAGCGTGGTGGAGAAAGAGATGATAGCCAATCACATGCATAGATTGGTCGACATGGAA
AACTCTGGCCTTGTTAACATGCTTATAGATGACAAATATGAAGATTTGGGCAGGATGTAC
ACCTTATTCCGAAGGGTTTCTGATGGTCTATCAACAATCAGGGATATGATGACTTCATAC
CTGAGAGAGACAGGGAAGCACTTAGTGACAGATCCGGAGAGATTGAAAGACCCAGTGGAT
TTTGTTCAGTGCTTGTTAAATGAGAAGGATAAGCATGATAAGATCATCAATGTTGCTTTT
GGCAATGACAAAACCTTCCAAAATGCTCTGAATTCATCCTTTGAGTTCTTCATCAACTTA
AACAACAGGTCACCTGAATTCATATCACTGTATGTTGATGACAAACTCCGCAAAGGACTG
AAAGGGGCAACAGAAGAGGATGTGGAGGGTATACTGGACAAAGTCATGATGCTGTTTCGG
TACCTTCAGGAGAAGGATGTGTTTGAGAAGTACTATAAGCAGCATTTAGCGAAAAGACTC
CTGTCTGGTAAGACAGTTTCCGATGATGCTGAGAGGAGTATGATAGTCAAACTCAAGACA
GAATGTGGGTACCAGTTCACCTCCAAATTAGAGGGCATGTTCACTGACATGAAGACATCT
CAGGACACCATGCAGGATTTCTATGCCAAGAAATCCGAGGAACTTGGTGATGGCCCTACA
CTTGATGTCCACATTCTCACAACTGGCTCTTGGCCAACACAGCCCAGCCCTCCCTGCAGC
CTTCCACCTGAAATCCTTACAGTATGTGAGAAATTTCGTGGATATTATCTTGGAACTCAC
AGTGGGCGGAGGTTAACATGGCAAACAAATATGGGAACAGCTGATATAAAGGCCACATTT
GGGAAGAGCCAAAAGCATGAGCTGAATGTATCCACTTACCAGATGTGTGTTCTGATGTTG
TTTAACTCTTCTGATGGACTTACCTACAAAGACATCGAGCAAGCTACAGAGATACCTTCC
ACAGACCTAAAGAGATGTCTCCAGTCTCTTGCTTGTGTCAAGGGGAAGAATGTTCTCCGT
AAAGAGCCCATGAGCAAGGACATATCAGAGGATGACACATTCTTCTTCAATGACAAGTTC
ACAAGCAAGCTTGTTAAGGTGAAGATCGGGACAGTGGTGGCGGCGAAGGAATCTGAGCCA
GAGAAGCAGGAGACCCGCCAGCGGGTTGAGGAGGACAGGAAACCTCAGATTGAGGCCGCC
ATCGTGAGGATCATGAAATCTAGGAGGGTCTTGGATCATAACAGTATTGTCTCCGAGGTC
ACCAAGCAATTGCAAGCACGGTTCTTGCCAAACCCTGTTATCATAAAGAAACGCATAGAA
TCTCTGATCGAGCGTGAATTCTTAGAGAGGGACAAAGCAGATAGAAAATTATATCGCTAT
CTTGCATAAAAGGCCACCATGTGAATGCTAAGATATTTCATGAGCAGGTGGCTTCCTTGT
ATTCCTGTAAACATTTCCCCTTGTGCTTGAGTTCAGTTTTATTTTGTTGGGCACTGTCCA
CTGAAATCAGTAGCAGTTGTTAAATTTGGTTATCGATCGATTCAAATGTGGACTTTACCC
CAATCCCTGCAACCTGTCTACTAGACAAGCATTCATGTTATGCACACTTTTGTGCATTCC
AAATTTTCGTTCACTTCTTGTGGATCTTGGATGTTCCATATCCTATAAAAACCATTTGAA
TCAAAGAGGCCTATGTTTTGTTCCAACTGCCATTTCACCTAGAAGATCTGGTAGTTTCTT
ACATTATCTGCATCTAGTGGAAGTATTAAGACTGTGCATACGTTTAACTGTCTAAGACAA
GGCTGGTTTGACCCCATTGCTAGGTATGGAGTACTTGCCAAATGAAAACTAGTCTGAATG
TAAATTGTGCATGTGCTTATGTTCATCATGTGTCAAGATCCATCCACAGCTTAATAATGT
CACCGATGATGTGGAATGTTTCTCTGCCAATTGCTTGAAGATAAGCGTGTTTGTGTTCTT
CTCTAAACATTCCAGTTGTCATCCCCTATCGTGCTTGTGTTCCTGTTACCTTCTGAACCA
TAAACCATTGTATCAGCTGTGAATTTCCAAAACGAAATGGGAAAAGGCAAATTTCTTGAT
TCAGTTTCACATTCACAATGCCATCTACGTTGAACGGCTACAGGAAGTGGTGAATCATAT
GCAGGCTGAATCCGAAAGAGAAGATTCCAGAAAGTTACTCCCTCCGATCCAAAATAAGTG
TCGTAGTTTTGAATTAAGGCTGACTCTTATGAATTGAAGGGAGTATATTTTTTCTTTCGA
AAGCATACAAATTGTGTGTCATAGCTTTATACAAGGCAGATGGTAAAGTACAAGAATTTG
GCAAGCTCCTACCACGAACCGGTGAGAAACAAACACCAGACAGACTCGGATGCACATAAT
GCAACTCCAACGCAAATGTGTCTGCCCTAAACTGACCAACAAAGCTACTTCTCAACCATC
GCACGACACCTTCAGAAAAGCAACACCCCCAAAGAACCCTACTTGCCAATGCACCAACCA
CCCTTTGATTACCTAAAAGAGGTGGCAGGTGGATGGCAGGATCCGGACAACCCCGAGAAA
GCCAATGACTTGGACTCACCCGCGACGGCGTAAATAGCGCCCTTGAATAACAATCTAGGA
CAAAGTACCCAAAAGAACATGACATAGAACTCCAAGCCATGTCTTCGTAAACGATGCTTC
CAACCGAGAAACGACGCCGAGAACATCGCCATCGCCGATCCGAACCATGCCCCCCTCCCT
CGAGATAGCACACGCTGTTGCCTCTTCTCCCCAAGCAGGCGTCATCTCCATTCCTAATCC
CCGAGCAAGCGACTCCGACTTTGTTGTAGACAACCATTGACCCAACCCACACCATAGAGG
TCATGCATAGCCACATGAAAATCCAATGCCAACTACCCGCAGCGTGAACAGTGAAACTTT
GACTCTGGTGGAGAGCTATGAAGGAGAACTATGCAAGGTTGATGTCACGGAAAACCACCA
AACAAACCACCTGCTGCCCTCAGCATCACAACAACCAACAAGCCAAGGCAATCCCGTAGA
CACGCCTAAGAAGAGCCGACTACCTCAATCATCGCCACAGAAGCCTTGCACCAACACCTA
CTGGTCGATGAGCGGGGATACGATGCCAAGGTGCCGCCATACTCCGATCACAAGGATCTC
GAGCCCCCCCCCCCCCCCCCCCCCCCCCCCGCC