Map Locations of contig_58149 (8434 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_58149

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70549 3 2881 bp AK357823 Available Available None
MLOC_70550 1 867 bp AK357823 Not available Available None





CDS Structure of MLOC_70549






CDS Structure of MLOC_70550






Contig Sequence (8434 bp)

>contig_58149 8434 assembly3_WGSMorex_rbca.fasta
TCAGCCTCTATGTTTCTATGTGTAGCATTTTGGCCCCATCTCCCTTTTCGCCCCCCCCCC
CCCCCGGCGGTTGGGACTTATTCTTCATGTAAAAACTTTGCCATGTTATCTTAATACAAT
TAAAAATGTAATTGTTCAATGAGTGTCCCATCAATAGACTGGCGCATTCCTGTTCTTTAA
ACATATGATGTTAGTTATGTTCAATACTGAATAAATAACAATGCAAATTGATATATTTAC
ACAACAATTATATGATGGAGTATATATCATGTCTCTTTAACATTATGTCCCTGAAACATC
TTGGGCGTTGGCGACAAGGCCACATCACGAAAGTCCACATATGAGTAAGGTGTGATACCG
AAAAAGCCCCACAAGGCAACTATTCAAGATGGGTTCACTACAGAGACCCTGCCATGAATT
TAAACCGAATCCTAGACAAGCCCATGGCCCATAGGTCGTAACTTTTAATCGTGTCAGGTA
ACTTCTTCTGTAATGGCACGGGTCATGGCCCTACGTGCTTGGGTTCTTTATACCTCAGGA
CCGATACAAGTGTATAATGGAAGGGGCTATGGTCCATAAAACGTTCTTAAAGATACACAA
CATGTCAATTGTCATTCCGTCGGTTAAGTACATATAGAAAATACATGCTACCGAAATCTG
AACTAAAATGACAAAAACAATATATATGCTATATCCAGATGTCATTATCTTTTTTTGCGG
ATGTGGTTGGTTATTTCTATGTCCATATATGATTGTCTAAATAATTTGTTGAATACTTTC
TCTAGCCTCGCTTACACTTTCAAAGTCTTCACTGTTATGCCGGCAACCAATCATCAACGG
TTCACCTCACCTCATAACTATATTTTGGTTATGTACATCGCTCGATGCACATACCGAGGC
TTGCTCCGCTTTTAGAGGAAAAAATAACAATAACTATAGGTCCAAGTACAACATTCCAAC
TTAAACTCAAGCAACTTTTTACTAAAATAGTGTCAGGAATGTGCATTTTTTTTGCTGACT
AAGACCCTTAGAAACGCTATATCTATATGCAATTTTAGTACTATGATAAATATATCTAAA
TGGTGAATTAAATGTGTGTACTCTCTGTATACGTACATATGCATGTATGTGTATAAGCAC
TCACTCTTTGTACTAGCTGTCCAACACTAGCTAGCGTATGGAGATGAAAATGGGGTTGTA
GGTAGCAGGCCATGGTGGGGCTGTGATGGTTATGGTGAAGGACCATGCGTTGCATGTTAC
CCCAAACTCCAAAGAAGGGTCGTGTGACCTGTGATATTGGGGGGTTGGGTTGGGACCAGT
GGCATGTAGCACGTTGCGCAACACCTCCTCGCCTAAAAAATTTGCTAATTAAATTTACTA
AATAAACTTGTGATGTATAAACTTGCTGAGGTCTTTGGTCCGATTAATCTTGCCAAATAA
ACTTAACAACTAAAGTTGAGAAATAAACGTTTTTGTTAGACGCAATGAACTAAGCTGTTG
TGTTGCTATTTTGGAGCTTGTTGTCGTAGGTGCTATTTTCTTATGTTTAATATAAATAAA
GGTAGTATTTTTTAGGTGCTATTTTCTTATGTTTAATATAAATAAAGGTTGTATTTTTTA
GTTGCCACTGCCACGTTTGATGATGTTTGATGAGTTATATGTCTAGTGTTGAATAAATAA
AAATGAAATTGATTTATGTACCTATTGTTTCTATGTTACACGTACCATGTCATTTAACAT
TCTGTTTGCAAAATATGTCATGAGTCGGTGACGAGACTCCGTAGTGAAAGTCCACAATTC
TGAGTCCGGTGTGCTGCGTACGTAAAGCGCCTCGGAAGGCATCTATCCGAGATCGAATGT
TTGCCACACTAACCTGCTACGTATAGAGACTCAATCCGAACCAAGCCTCTGGCCCACGGG
AATTCACCTTTAAACGCGACAGATAGCCTCTAGAATAATTGTATGGGGCATGACCCTAGA
TGCTCTGTTTCGATATGATATATCGGAGGCTCGATAAAATAAGTATGATCGAATGGTGTA
TAGGCCCTGGGACGTGCTTAAGATGACGAGTGTATCCATTGTCATGTCTATGTGGTAAGC
AAGTGTAAAAAAAATAACTTTCTATATGAATTTTTAATATAAAACAATGTACACAATACA
TAAAGATGTGAATATCTTGTCTCATTTTTGCAGGAAAGGTGTGGCCATCTTGTATTTCTA
AACAACCGGTCACAGACCTGTTGTAGCCTCGCTTACTTTTCAATGTAGTCATAGCGGCTA
GCTAGTTATGCCAGCAAGCAATCATGGACATCAATTTGGCTGTAGCTCAACATAATCCGT
ACGCACAACATTTTTACTAGAAGTTTACGTACGCGCTGCAATTGTATAGCTAGTGAGTGT
CGGCAATGCCCATTTCAGCTGGCTAAAATTTCCAGAAAATTTGCTCCGGTCTACTCCCAC
TGTATCTAACTATAATTCTCTCCAACTATAATTATATAGGTAAAAAAAAAGTATGTACAT
ATGAAAGGCAAATTGAATGTGTTTACTTCTCTCTATTTAAACGAGCATTTGATAGTTTGA
GGCATTCAATGAATAAATACTCCATCCGTTCTCAAATATGAGTCTTTCTATAGGTTCACC
TAGTGTACTATATACAAATATATATTGACATATTTTATAATATAGATAGATTCATTCATT
TTATTATGTATGTAGACCTTTAATAAAAAAAATTAAAAGTCTTATATTTAGAAACGGATG
GAGTAAATCTGTAGTGTACTGACTGTCCAACACCTGCTTGTGTATGCATGTATGGAATGG
GAGTAGATGGAACGAAAACGGCGTTGTACGTACGTACGTAGCACGCCACGGTGGGCGTGA
TGGTGGGGGTGGGGGTGGGGGTGAGTGAAGGACCATGCCATTGGAGGCGTTGCGTTGCGT
TGCATGTTACCCCAAAGAAGAGGGAGGGTGTGTGTGTGTGTGTGACCTGTGAATGATACG
GACGAGGTGTTGGGTTGGGCTTGGTGTTGCATGCGCCGTCAGGCCCCACCGCACAGCTGT
TCTAGTGTGGCCTTGTCCCTCCCTCCCTCCACCGATCCAATCCAAATCCAAATCTAAATC
CAAATCCAATCCGGCAAAGCTCTTTTCCCGGCATCCACTCTTTTCTGCCGTCCGTCCGAT
CGCTCATCCGTCGATATATCGTAGGTAAATCGTCTTCCTCCTCCGGACCGACGTCAAAGC
CACCACCGAGCGAGCAGTAGAGTAGAATTACTGTGGATGGATGGTCGAGTAGAAGAAGAC
GATGTGTGAAAAGAAAACAAGACCGCGCGTAACCTTCCTGACAGCGCGCGCGCCCACCCC
CTCTCTCTCTCTCTCTTATCATCTCCTGGAGGGAGTACATCATCTTCTCCGGACGCATCT
CTCCCTCTCCCATCGGCCATCGCCATTTCTTCCTCCTCAACCTCCCCCCGCCCCCGGCAC
ACCTCCCTTTTCCTCCTCCTCCACCGCCATTTTTATACTACTATTTAGTGCACACCTCCC
GCCCGCTACAGTTCGTACCACTCTTTCTTCTTCTTCTTCTTGTGTTACGGCACCACAACC
ACAACACAACCCCCATCCCCATCTCTCTCTCTCTCCATCTCCATCTCCATGCCAGCCTAG
CCTAGCTACCCAAAGGCCAAAGCCACTACTTATCTCACTCCCACTCCTCGCACTACTTCT
TCTTCCTCCTCCCCCCTTTTCCTCGCCGCTTCCACCCCTTTCTTTCCAGGTGTACTCGCC
GGTAGCGGCTGCTGCTCAACCTCTTCATGCGTGCACTGCTCATGGCTCCGCGGCCTCACT
CCCACAGCACCACCCGCCTAACAACCCACCACTGACCACCAAACAATCCTGCTCAATTCC
CCTCTGCGGCGCCATGCAGCAGCCGCCCGACATGCCGCCCTTCTCCCCGGCCGGCTGGCG
CGGGCCCGCCGGGGCGCCCTCGCCCATCAGCAGCCGCCCGCCCGCGCCGACTCCTGCTCC
TGCGCCAGGACAGCAGCACCAGCAGCATCAGATGGACGAGCAGCACGGGGCCGCGGTCAG
CGGGTCGGGGTCCGGGAGCGTGGACGGCGGCGAGGAGGGCGAGCGCGGCGGGTCCTCGTC
GGCAGCGCCGGGCGGCAACCGTTGGCCTCGCCAAGAGACGCTGGCGCTGCTCAAGATCCG
GTCCGAGATGGACGCCGCCTTCCGGGAGGCCGCCCTCAAGGGCCCGCTCTGGGAGGAAGT
TTCCAGGTAACTCGATCAACTGAATTCACTCTCCGATGCCAATTTCGCAACGGAATTCCA
GTTCCTCACGCCTCGTCTCCAACGTACGTCTCCAAGCTAGCAAGATGGATCGACGTCCCG
ATCCATATACATGTCTCAATTGTATTGTTGCATGGGAAGAATTTCACTGTCCCCAAGCTA
GGTGTGTAGATGTGATGTGTGATGTGATAATTGATCGGGATGCGGTTCATGTGGCTCACA
TGCTCTACCCAAGAACTGTCTGCCCACCAGCACGAGCACACATGATGGATGGATGGATGG
ATGGATCGATTTTCCCCCAATTAAAAACCATACGCACATCGCTCTCCCTCCTCTACTTTT
CTGTTTCTTTTTCCTCGGATTTGCGCCCGTCAGATCCAGTTCCCAGGCATCAATCCCGAT
CACAATTCCCCAATACTTAATCCCTCCATCTGCATCCCCAATTTGGGGCTTTTTCATCAC
GACCAATCGGGCTAAAAACACCGCGGCTTGGCTTTTCCTTTCCCGTGAGAGCAACGCATG
CATGCGCGCGCACGTATGCAAACAATTGTGATGGATCGATCGACGGTGATGGTAACATGT
AGGAGGAGTATATATGATGGGATGAATCATGGGAAAGTGAAGTGAGCTTGTGTGGCTGAT
GATGATTAATTCTTGTGTTCATCAATGGTGCTGCAGGAGGCTGGCGGAGATGGGCCACAC
GAGGAGCGCCAAGAAGTGCCGCGAGAAATTCGAGAACGTCGACAAGTACTACCGCCGCAC
CAAGGACGGCCGCACCGGCCGCGGCGACGGCAAGACCTACCGCTTCTTCACCGAGCTCGA
GGCGCTCCACGGCGCGCACCAACCGCCGCCTGCTGCTCCCGTCTCCGCCACCATCGTCAC
CTACTCCGCCGTGCCCACCGCGCCGCCGCGCGTCCTGCAGGCTGCAGAGCCGTCTCCGCC
GCCTCTATTCCTCACGCATCAGCCGGTGCCTACGGAATCGCCTGCATGCCTGACGACGAC
GGCGCCGGTGGGCGACGCGAGCTTCTCGGACTCTGACGGCGAGGACACGGACGAGACCGC
CGACGGCGGCAAGCGCAAGCGAAGGGGCGGCAGCTGGGGCCATGGCGGCAAGGCCATGAG
GTTCTTCGAGGGGCTGATGCGGCAGGTCATGGAGCGGCAGGAGGCCATGCAGAGCCGCCT
CCTCGAGGCCATCGAGCGGCGCGACCAGGACCGCATGATCCGCGAGGAGGCCTGGCGGAG
GCAGGAGGTGGCCCGCCTCGCCCGCGAGCAGGACGCGCTCGCGCAGGAGCGCGCCGTGGC
CGCCTCACGCGACGCCGCCGTCGTGTCCTTCATCCAGAGGATCACCGGGCAGATCGTCCC
CGTGCAGGCGCCATCATCCTTCCCCGCAAAGCCGGCAGCCACCGTCACCTCTGTCAAACC
GCCGCCGCTGCAGCCGACGCCCGTCGCCTCCGCTGCACCTGCGCCGGCCCCTCCAACGCC
ACGGCCGCCGGTTCAGGCGCAGCCTAACGTGACTACACCAATGAGAACACAACCGCAGAC
GCCGCAGCCACAGCAACACGTAACGCCGACGGCGACGCCAGAGCCACAGCCACAGACGCC
GCAGCAGCAGCCACACCACCAACAGAGCAAGGAGATCGTCGTCCACGCGCCGGAGCAGCC
GCCGGTGGACATGGCAGGCGGGGCGTCGCCGTCGAGGTGGCCCAAGGCGGAGGTGCACGC
GCTGATCCAGCTGCGGACGGAGATGGAGGCGCGGTACCAGGACACGGCGCCCAAGGGCCC
GCTGTGGGAGGACATCTCGGTGGGGATGCGGCGGCTGGGATACAACCGGAGCTCCAAGCG
CTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTAAAGGAAAGCAGCCG
GAAGCGCCCCGAGGACTCCAAGACGTGCCCCTACTTCCACCAGCTCGACGCGCTCTACCG
CACCAAGGCGCTCGCAGTCGGATCCTCCTCCTCCTCCTCCTCCGGCGTCCACGCGCCGGC
GCTGCAGGCACCGGCGCCGTCCTCGGCTCGCGCCGAGCCTGCCGCGGTCACCGTGCTCGC
GCCGGTGCCGCTGTCGTCCCAGACGCCGTCACCTGCGGCGCAGCACGTCGAGCACGCTGC
CAAGAACTTGATCAGCAACGGTAACGGCCATGGCAACGGCGCTGCCATGCAAGTGAAGGC
GAGCAACGGCGCCCCGCCTACCGTGGCTATGTTCCCCAGCTCTGCCCAAGCCGCCGGCAA
CGGCGCCAACAGCGGCACGGCGACGAACAAACTGGTACGTAACTCTCGGCCCATGCATGC
ACATACACATTGTCAATTCCAACCGTTCTGATCGATGCCAAGTACACGCCATGTATTTTG
AAGGAGCTGAAGCAAGAAGGCGTCGCCAAGGAGACGGCACCGGTGGTGCAGCCGGCCGTG
GCCATGAATCACAGCTACGGCCGCAACGACAGAAGGGACGTCTACGACCTGGACAGCGAC
AGCATGGACGAGGACGACGAGGACGACTTCGACGACGATGACGATGAGGAAGACGACGAC
GTCCCCGGCGGCCGCAACATCAACATGCCGCCGGTGCTGCATCAGTACGACGCCCACTTC
CTCCAAAGGCAGCATCAGCATCAGCAGCAGCAGCAACAGAACCACAACCACAACCACAAC
GTAGTCAGGCCCAACGCGGCGAACGGCAGCGGCAACCCGCCGGCGGGCAACGCCACACCA
ACATCGGCGGCGGGGGCGACAAACGGGGCGCCATTCCTGGCCATGGTCCAGTGACGATGG
ATCGAGCAAGACGACGCTAGCGCTACAAACCAAGAAGGCCCAGGTGGTACCGATCTCGAT
CTCTCACTCATGTGCCCATACGGATCCACATTTGCACATGCCCACTTGATGATGGATTGA
TACCCCCTGCCTGCCGCTGCGTGCTAGGTAAAAAACCCAGACCTGAAAACCCTACTACAC
AGAATTTACTTCTGCTCCTTCCAATCCAACAACCCTAAATTATTTCCATTATTGTTTATT
ACTATTATTCCTGGTGCACATACATATATATATATGGGCGGCGTATACATGATGTACATG
TCACATATCTTCACCACACTGTACGTAGATGCATGGTAAATTAAACGGCGTGGGGATTTC
CTTTTTTTTTCCACTTTACTTTGAGGATACTTCTGGAGCTACCATTTTTGTCTAAAAGAA
GTTACTGTCCCGTATGTGTCATGTAAGAATTTTTGTGCTCTTGTTAAATGTTAATGACTG
TCCGGAACTTTTACACTTGGTAAATGTTAATCCTCTCCTATATACTATATATGTTGCAAT
TCATGTACTATACTCCTCTTCATGAAGGGGCCGGCTAGCTTCTTTTTAATCTGTGGAATG
TGCCTGGCACTTGGATGGCAGGTACTAGTACTTAAAATGTACTACTAGTAAGAGATGGTG
GATAGTTGCAGTAGAATATGTGGCTTGAACTGTGTTTATTCTCTAGGATCCAAAGTTTAC
ACACTAGTTTATTTGTGATGGTCCACTTTTGGTTGAGCAAGTAGGGTTCATTAGCCATCA
CTCTTGATACTATAACCTAACCATTGGATGGTACATGACCTGACGGCATGTTGGACAACT
GAACATGCAAGGAGTAGTTGCATGAGATGGGCAAAATTAAGTACTATTCGTCCCATCATG
GTTTCCGGTGCGCCTGAATATGTAGGTGGGCAGCTTGAATTAATTCAACAAGTGTCTATC
GGGTTGTGTACTTTTTTTTTGTAGGAGATAGAAATATGTTAGGCTAAGAACATCTTCAAT
ACGTACCCTAAAATAAGGCAGGACCACTTTTTCATTACAAGGAGGCAAAAACTGCATTAT
AGTATCGACTCACAATAATATCACAAATATGTAAGAAGAAAAAAAGAAAAGCAAAAAAAT
ATTTACATGAATTTTCTTGCAAGATCACGGATTATAGTATTGACTAAGACATAACGAAGT
CTCAGTCGAGGCTTAGCAAAACTGTATTCGAAATGTTTTACTCCAAATTTACAACACTTG
GGCGGTTGGGGCAACTTTTGTTTTTTTGATTTTTTTCCGGGGGAGGAATGGAAAGCTCCT
CAACCACATGAATATATTGCTATGAAGAAAAAGG