| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_58117
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_70528 |
2 |
491 bp |
AK361557 |
Not available |
Available |
None |
CDS Structure of MLOC_70528
Contig Sequence (9502 bp)
>contig_58117 9502 assembly3_WGSMorex_rbca.fasta
TCGGCTTCCACCCCTTTGTAGATACTACGTAGGGTGTTTCCGTACTAACAAGACAACCCT
TAGTCGATGTCTCGGTGCCCAGAGGCGGTTGTGTTTAGTGGCAACGAAGCAATCAAATAT
TCATGCTTTTTAAATTTCACTTAGTCATAGGAACTTTTAAGTAGGAAGCCAAGTTACTAG
CCCCCGGTTAGTGTTCGACATCAGCTGAGCTTAATCCATTAACACTTCGGCCAATTTATG
TAAGGCCCGTGGGATAACCTCTATCGCTCTATAGTTTGACAGAGTCATTGGGTCACTCCC
AGCTCACGCGCATTGTGACAGTCAATTTTTGGCTTTCTCCACTGAGGTACTTGACCAGTC
AAATCGGAAGTACAATCGCAGTGGTTCTCCCTTTGCACACCTAGCCGAACAAAGCGGAAT
ATAGGAGGCAATCATAGGAGCTGGGAAACCCAACTATTGATCGAAGAAACAATTCAAAAC
TGATGCATATATATACAGCAATATCCAAGAAACCGAGGTGCAGGTCGGCACGAAAGATGC
CGAACTACGGGTCGGTAAATATTTCCCCGGATGAATTATTACCTAGGGCACCTCGTTGAA
GAGGATGCCCGGCCTCTTAAAAGAAAAACATAAAAGTAGTTTAATGGTGTCTAAAGCACG
ACAAACAAAAAAACTTTAGCAAAAACTTTACGTCTGAACTAAATCAAGTTTCTTGGTGCC
AATCTGAAAATTGGTCTTAGAATTAGTTTGTGCTTCCGTCATGCTTTAACATGACACATC
CAATCTCAAGATTTCAAGCGGGTCAGCCTTCGGCTTCAACTTCCATATCCCGAAGGCGGA
GTGTTTTTCCGAGGCCAATTTAGCAAACTAAACTCCAGCGACCGCACATTGGAGTCGAGA
TAGGAGCAGTAGAAAAAGACTTTGCAATGACAAAAAAGAAAACATTTACTATAAAATGGC
TCATATAAATTTTTAAGAGTCCAGGTAACATGGGTAAAGGAAGTGTTTTTAACAAACAAC
GTTCTTAACAAGCTAAGTTTTTAACAAACAACTTTTGTGTTTAACATAAATATAATGACT
GGCTGAACCGGACAAAAATTAAAAATTGAAAATAACTTGAGCATGAAAGCGACTTGGCTG
GTTAATGTGCTCGATGTTGATGACGAGTTTTGAGCTTGTGGAGGGTCAGGGTCCCAGCCC
CTAAGCCTCTCACGAGGTAGCCGATGAAGAGCTCGGCTGGATGAAGTGACAACACAACAC
TTCGAAAGTGCCGAGTCGAAACCCGCGGTCGAGCTGAGGAGACAGAATAGTTCAGCAGTG
TGACGGCAAAGCCCCCATGTTAGTCGACCATGTCGATGATGCAATTGGGTTGACGGAGGC
GTGATGACAACGTCGACGCACTGATGTGACTGTGTAACACGGTCGGAGACGATCACGTGT
GCACATAAAATAGTGCAAGCCAAAAATAATATCAAATAATAAAAAACCTTTACTTAATTA
ACTTAAGTGAAGTAAATAATTAGAAAAATATGCCTGAGTGTGGAGGTGCCCGAGCGAAGA
GATCGGCTTGATGAAGTTGCGATGCGGCACGATTGATGTGGCGAGGCGAAACCCTTAGTC
CAGCCTTGGTGACGAAGTTGGTCAACCGATGACGCCGAAGTCCCCGCGGGAGGTTGATGA
AGAGATGACGAAGCCCCCGATCTAGCCGAGGTGACGTAGTAGTCTAGTAAGGTGGCGCTA
GAGCCCCCTTGCCAGCTGATGTGTCGAAGTAGGTCGGCGTGTTAAACGTCAGCTTGAAGA
AGCGACGGCGCTGCGATGCCGACGTAGGTCGGAATCTGTGACACGATCAAGGCTAGCTTG
AAGAAGCAATGGCGCGTCCGACCGATGCAACCCGTGGGTGACAAGATTCTCTAGAGATAA
TTTGGCCCCCGCAATGCCGAACTCTTGGTTGGATCGCCGAGGTGTTGATCCGATGAGATT
AACCTTGGCTCGACGAAGCGATGATGTGTCTAGTGCAGGTCAACAGCCGTGGAGCAACGT
TGTCGGGCTGGTTTGACACCAGCGCAATGGTGAAAATTGCCTTGAAAAAGACTTAAAATT
TATGGGCATGTGTTTCAGAACAACACATAAGACCTTAAACAATTTCTTCAAAACGGATGT
CCAAAACCCCGTTCATGAAGAAAGATGAAATTGGGTCTGATTCATTTTCACGAAGAAAAC
AAATCCAAAATTCGTTGTACTCGTTGCACGTTTCCCAATGTTTGGACGGTCGGATCATAC
TGAAATTTTGAGGGGTGGTCCATAAAGGAATTCCGCAGTTGATGAATGATGGGATTTGCC
AACGGATGTACGAGTTGTATACTGGACTCCTCGCCCTAAACTCCTCCAGATTCCTGTCCG
AATTTGACAGGCTCCGGTATATCGGAAATTACCAGAGATTCCTCTATAGGAACGCGATGA
AATTTTGCAGGGTTCTTGTAGATACAATTTTGCACAATTCCACCGAAGAAATCGTCAATG
CGACTCTCGAGGAAACGGGGACGACAAACACACATTCGCTGTCCAGGAAAAACTGCAATC
AATCTGCAAACGAACCATCAAATCTTCTGCTGATCATAGCGTGGAACTCTCAATGATAGC
ACCAATGTCGGCATCAAAACCGGCGAATCTCGGGTAGGGGGTTTCGAGCTGTGGACCTTG
GATCGAAGAGTAACAAGGGACGAAGGAGACGATGTTCACCCAGGTTCGAGCCCTCTTGAT
GGAGGTAAACCCTACGTCCTACTCTTTTTGTACTGATGATGGATTATTGAGTATATAGTT
AATCCACCTCGAGATCATATGTTGTGGTCTAAACCCTAAGAGTAAAGATCATATAAACAT
GAAATAGTCTATTGACTAGCCTGGCCTCGGTTTATATAATGCATCGTAGGCCTAGGATAA
AAAGATTCCTTGCCGGCTACATCGATGTAGAGGAGTCCTTGTCTTGATCACCAAGTGTTA
TGGAATCTCCCTTGTATACATCATGGGCTGCACGAAGTGGCCCATTAGTGAATTACACGG
GGGTCCTCGGCCTGATCCACTATTCCGGAGACGACGTGTTGAGTACCCCCTAGTTCAGGA
CATCGTCATCCGACTCATAAGTCGAAGTCTTCGAATGCACGTGCACAGTGATCCTAGAGA
TTAATGCTCACTGAACATATCGTCTTACACAAATTATGACCATTATGGTCAAGTCTTACA
TAAAGAGGGCCATGAAGGTCAAACACCAAAGAGAAATTCGCAAAGGAAATCTTCAACGAT
AGAATGGATCCATGCCATTTGCCTTAACCCTATAGGCATTCTGACTAGGAAGCGGCCTAA
TTTGCATGATCATCACCAAGGTACTCTTCTCCATATTCATGTTCTTCCATGTGTGGCCAA
TTAAATTACCAGTGGCAAGTTAATAAGTACTTTGAATGTTCTCGCAAGCAACCCATGTTT
GGAATAAGGTACAACCATGCATGATATAGCATTAAGTAGGAAGTCTTGCGGCAAGCTAAT
TTTGAGTGCAATGACATGTCCTATCAACTTGTAAAGCATGTATCGTGAGGTTACGAGTAT
CCATATGAACAGGTTACAAATACTAATATAAACAAAGTTTGGAAGAACTCCAGTTGATCA
TCACACTGAGTCATCCGAGTCAATTCATGTATCTCCTTTCCACACACACACAACAAGTTT
TATAAACCAATAGGCTTAGCCCAAGAGCGGTCATCCAACTATCCTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACACTTTACCCACAAGACTCGGGGGA
CTTTCGTGTCAAACCACGACTCGCGATACATTTCATACCCGAGGTAAGCACTCGGACAAT
GCCTTTACCTTGACAACACTAAACAAAGATTCCACTATTTGGTACCCAGCCCTCACGATG
TACATCGCAAGTTCAATCCCTGAGAGGACCAACGGTGTCCCTGGTGTCTTTGAAAAGAAC
CATAGTCATCCTTCCCGGCATGACACCATATCGAGAGTGACCACGCCACTCCCTCCACTA
GTAATGAGGCCTGTCTGCTAGCGTTGACAAAGGTAATCAGCAAATCCACGTGCCATAAGG
GTATCGTGGTGGTATATGTAAGGTTGGAGTAACGGTCGCAACTTAGACCAATCCGTCTTC
CAAAACAACACACTCGCTTGCCTCGGTACACCACTTCTTTATTAAGTGGTTAATTAGATC
AACATCTCCCTCGGGTATTAGTGGCACCCGACGGGTTTTTCAAAAAGTCTATGGGAATAC
TTTTGTTTCCAACACAATGCATATTTACGCCCCACTTACGTAGCATCTAATAGCATCCTA
TCTGCGTCCCGCCCACATAACTCTAAATAGAATAAAGAGTCATGGCAATGCAAGTATCAA
TGAGGAAAGCAACGAAGGCAACTCACTGGCTGCTTTCGTGGCTCAACAAAGTCTTTGGGG
TCTTCGAAAGCTTCTGGTTAAACTTATCCGTCAATAATGTAATATATCGTCGCAATATAA
AGGGAAAGAATAAGGCCACGATAAATACAGGGAAAATAAATCACTTGTAAAAATGGCTTA
ACTCATTTTTGTAAAATACTAAAGTGAAAACTAAAAATACCATAATTCCTAATTGTTGTT
TTTCGAGTGCCAAAACAGAGAAAAGGATTTAAACAATGGGTTTAAATAGGGTTTCAATTA
ACAAATCTAGAGAGAAGTTTATTTAACATGCAAGAAAAATATTGTAAGAATTTAGGAGTT
GGAATTATTGGATTTGGATAAATATTCTAGTTTCTGGAATTTTTGGAAAATACTGCTAGA
AAGAAAAATAAAACGACCCAAAGGGCGGCTTGGCTAAAACAAACCCAGATGGGCTGGCCC
AGAGGGGAGCCATCTTGGGGCAAATTGGTGCCCCGCGCTTGCGAGGTTTAAACCTAACGG
GTGGCCCCTGAAGTCAATGAGAGGGGTTGTCATCAACCTCCGACCATGGAGGTGGGGTCA
GGGACGTGGTTGCACTCACCCGTACAGCGAGGCCAACTGAGGATGGGGATGGAGTCAGGG
CGATGTCGCACTTCGGGAGGGGGGTGGAGTCATCGGGGATGTCTGGGTCACCGACAATGA
GTGGAAGTAGCGGCGAGGTTTCGGGTGAGGTCGCCCTGGCCGATTCCGACCGCAACCTGC
ATGGGAGAGGAAATGCAAAGGCTCAGGGGGGCAAGGGACGACCGTAGGAGAAGAAAGGAG
GGTCGAAGAAGGGTTGTACCGTGAGATCGACGGTGAGCCAAGGCAGAGGTGCTCCGGTTT
GACCCACGCGCAGGGTCTCTGGAAGATGGATTGGGTGATGCGGGCAAACGATTAGAGGTG
GCAGTGGGCGATAGGGTGGAAAGGGGGCCCAGAATAGCCTCTTATAGGTTGGTGCTGGTG
CACCGTGGGCGGGGTTCACGGGAGTCCGCTGCAATGGTCGTGGACGTCATGGGAGGGCTC
GGTATCGCCAATGGGGTGCTTGTGGATATGGACTACGACTAGAGGGAGGGAGAGAGCGCG
GGGGAGTGTCCTGTTGTTTGTGCGTTTGAAGCCGCCCGTTGACCGAGCCGGCGGCGCAGT
CACATGCGAGAGGGGTGAGACAGAGAGAGGAAGGAGGGGGTCGGTAGCATTGACGTTTGC
AGACGCCAAGGGTGTGCCAGGCACAAGACCCTGCTTCCTGACGCTCTCGGGGCCTTGGAA
TGGGAGCTGCTAGAGTGCGGGTTGACACTGTAGCACGCTCTGGAGCATGCATTTGGCATC
CCAGGGCATGCCTCATCCACCCTGGTCGTGTCTAACCTTGTCTCTTAGCTCTTGGGGGTT
TTGGAGATGATGTGGGCAGCTAGGACGGTAAGGCAAGGTAGAGGTAATCGAATTTGAAGT
AGAAGAGGAGCTGTCCTTGGCTGACCAGGGAGGTAAAAATGGAGTTTTCACCCATAAATC
ATTGATCTGAGGCTTTGAAACTTTTACCACAGGTAGATGGTGAGTAGGAAAGGCTGTGGT
AAAATTTTGAGGTGAAGGAGAATAGTGGAAGGTGTGAAACGAGTAGCTTTTGGAATTCAC
CAGGAGGTGTTTCATGCTGGTTTGGGCATGATAATTGTTTCCCCATGCTATGAGATTTAA
CACGAGTAAATGGTAGATAACAATGAGATTGATCACTAAGTTTGAGCTTATTTGAAGAAA
GTTGCCAATGTAACTCTGCCAAACCCTAGAAATCCATAGAAATAGGTTTCCTTAGATATA
GCCATGCTAATCTATTGCCCTTGATGCACCACTTTATGTGGTGGCATCATTAGGGTAATA
TATCATGCCCACAAAGTTTGGGATCAAAAGCAGGCAGTTGGCAATGTAGAGTTGCTCAAA
TTTAGTTTTGGACAAATAGGGTTTTGGGGCACTTTGATCAACCAAAACAATTTGGATTGA
GGTGAATCTTGGCAATATCATCACATATGGCATATGTGACCTGCTGGAATTTTCATGGAT
TTATTTGACAATATTTCTTATAGAAATATTTCAAATATTTGAAAATGTCCACAAAGGGTT
TTGGAGGGTTTTGTCCAACATTTTAAACATGACCATGTGTTGAAACTCTTATATATGGAA
AATATATGCTAGTGAGTTTTCCTAAATTTTCTTAGATATTTTGTAAACAAAAAGTAATTT
TCACCTATAAAAGACCATTTCTGGCTTCGGAAAAAGGCATTCAAATGAAATACAAAAATA
ACTTTTAAAATAATATTTTTTATGGTTTTGGAAAGTCTTAGAGATGATGGGTTCCAAATA
AAATCTCCCGGGCAAAATATTCACCCTAATTTGAGGACTTGCAGTACAAACCTTAATTCA
ATGATTTTTAAAAACCTAAATTGAATAAATGCTTTTTGACCAAAATAATATTTTAAAAAA
TAGTTTTATATCTTATACACATGACATGATCATTGAGCAAGGATTTGAATCAAGAGTTGA
GTTTTGAGAGTAGGAGCATTTTTATGAACTAAAACACAAGCAAGCAAACAAGCAAATAGC
AATCAGCTCAAACATTCACACGCATGCAAAAAGTTTTAATTGATCCAAACTTTTGAACTT
ATAATTATAGCAAAGTGATACAGACATAGGGTATGACAGTCGTTCTTTAACCCTCGTATA
CAGACCAAATATGAAAAGGATATGGAGATGTCCGGACAGTTCTTCAGGAAGGATGCCATC
CGAGGTCATCTTTTTTCTTTTTTATTCTAATTCTTTATATATCTCTTCATCCTCATCACT
CACATGCATTTGTCTGAATAATTTGAAGAGGATATTGGAGACATGATTGCATAAATAAAT
AAATAAAAGTTCAAAACAATGATCACGTTCGCAAACACTTGAGATCAAAATTAGCCAATC
TTGGTTTTAGATGCTCTTCCCAGTAACGGCTAAAATTCAACCCGAGAAATAATAACGAAA
TACAAAGCATAGTTAATCTGAGCTGTTGATTGGACGCTGACATGGCCGTGCAAGACAAGC
GTACCGAGCCCAAACCACGTACACGTGGTACATCATCCATCCACTCAGTACGGTCGTACT
GTCGCTGTCGCGCCACGTATCATGGTTGGCGGCCGTTGAACGCACTATATAAGTACCGCA
CACCCAAGGGGCAAGGGCTAATCCAAATCGTTGGCGCTCTAAATAATCTCCTCCACTGAC
TCCCCTCCCCTGCCTATCCACTCTGCTCCACCGCCATGGATTTCTCCTCCCTAGCGAGGC
CGCAAGCGCTCCGCTGTGGCTCGACGGGTGCCCTCGGCGCCCACGCCGCTCGACGCCGCT
CCGCCCAGCTGCTCTGCCCGCGCCGACCCACATTCCGCTGCTCCGTCGAGGCAGCCAAGT
GAGTGCACGCCAAACCCCGTACTGCTACCCAGCCTGATCGATCCTCCCGCGAGCTGCAAC
GAGCATGGGATCTGAGGAGCGCGCTTTTGTTTTCATGCGTCTGCACCGCCAGGCAGCAGG
TGCAGGGGACGCTAGCCGCGGAGGCGGCGGCGGAGGCGGCGCGCAACGAATGCTTCGGGG
TCTTCTGCACCACCTACGATCTCGAGGCGGTGAGTCGTCCTCACTGCTCTCCCTCCACGT
GTTCGTTGAAATGATCGGCTGGTGTCTGGCTGGGTTGGTGCGCGCTCGGAGGATTCCGCT
GGAAGCGTTGCTGGTACCGGGACTGCGATGTTACGCCCCGAATCCATCTTCTCGATTGTG
GCTGGGATTTGGTCATGGCTTTTGAACTGAGAGAAGAAAGTGGCTTCTTCTTTTTTTGTG
ACGCTGCAGAGTTTAATTGTGATGAAGCCGTATCACTGCTTGATCATTTACACTCCCTGA
TGACTCGATTGATTAATGGATATTCATAATTGAATGTGCTTAACTGATACAGAGCTGTTC
ATATTAATCTGTGCTCCTCCTGTCAAACGGAACGCAGGATGAAAAGACCAAGTCCTGGAA
GAAATTAGTGAACGTTTCTGTGTCAGGTGCGGCTGGGATGATATCGAACCATCTGCTGTT
CAAAGTAAGTTGCACCGAGTAATAAAAACATTGTCTTCATCCAATTTATTCAAATTTTGT
CTATGTAGAGGTGTTGACCCTGTCAATAATTCTCCTCCTTTTATTGAAAATGCATAGACA
AGAATGGCACAGTAACAGTCACAATATACTCATTTACCAGATCCAAGTGCAGTATATTGA
TAGTGCCAAGTACTGCCTAGTGATAATTCTACTGTTGCCACTAGGAGTACAGAGTCATGT
TTGTATTTTTGCCAACACGACAACCGAAGCTACCTGCTATGCACATAACTGATTAGTACT
TTCCTTTCTGCTGATGTATCATCTTTGTGCTTAATTACAATGCGAGTGACCATATTCTTG
TCTTGAAATTTTGCACCTGGCACATCAGAAACGTATAGTAGTATTGACCATTTATTCCTC
TAAACTTTTGCAGCTTGCCTCCGGTGAGGTTTTTGGACAGGACCAACCAATAGCACTTAA
GTTATTGGGCTCAGAAAGATCACTACAAGCACTAGAAGGTAGCTTCGCTAACTTGTTTTC
CTTGACATTTCAGAAGCAACACAGATCCATCTTAATTTGCTTTTTTTTTTTGGAAAAGGA
GGTTAAACCCCCGGCCNNNNCATCAATCGATGCATACAGCCATCTTTATTAATTATTCAA
CATAGGTCTAACAAGGAACATACTCAAACCATCCGAAGCCACCACTCACACATACAAAAC
TCGATAATGTGGAGTGCTCTCACTCCCCATATCTAAAACCAGAGCTGTCACCGATCCATC
CACATAACGTATCGGAACCCATAGCCGGTGCAGCAGACCTAAACCGTATACCACATGCAC
ATGTTTTAGACGCCACCATCATCATCGGACCGCTGATCAATCTTCAGGAGAGAGATCTGT
ATCATCCTTGTCAGTCCGTCCA
