Contig Data
morexGenes
Links



Map Locations of contig_57979 (5311 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57979

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70441 1 1827 bp AK367813 Available Available None





CDS Structure of MLOC_70441






Contig Sequence (5311 bp)

>contig_57979 5311 assembly3_WGSMorex_rbca.fasta
ACTGGCACTTGGCACTGAATTATTAGTTAGTCCCAGAAAATAAATAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGCGTTGGAGA
CGTATCAGGCAGCAACGCGCAGGCGGCGCCGGCGACAGAGTAGAACAACGGCGACCTGCT
ACGGCTCTAGGAGGGGATCCTGCTACCAGGAACGAAAGGGAATCGGGGTGGCTCACCCTA
CGCCTCGACGTGGAGGAAGCAGGCGACGAAGAGGAAGCAGCCGTTGCGGGAGAAGTCGCC
GGAGCAGAGGAGGAAGAGGTCGTCGTCGACGTCGTGGAAGCAGTGGCGATCGGCGCTTCC
TTGATGCGGAAATGGAACCTCCTAGCATTCCGCGATCTCCTGGTGCTGCCGGCGAGGAGG
GAGGGCGACGACCTTGACGGCGACGACCTTACCAATGGCCGGCCATGGCGGAGGGAAGCT
CGGGATCGCCCCCGGCGGCGCCAAGAGAGAGAGGGGAGGAAAAATGCGGAACCCTAGAGC
TGGAGAGGACGGCGGGCGGCTTATATTGCCTCGGGGGAAGAGCTGGAGCCGCAGGATCGA
GGAATGGTGGACCGGTGGTGGAGGTTTGGTCGTACAGGGGTGACGCGAGCGGGAGGAAGC
AGACGGTCGTGGAGATGGGCTGGCTAACGAGAGAAGGGGGAAATGGGCCAGCGAGGGGGA
GGGAGCCCACTCGGGTGGCGCCAGAAAAAGAAAGAAAAACCACTGGTTTTTCTATATAAA
ATAAATGCCAGCAAACAAATAAAACTCCTAGGTGATCTATGGCTCAAAGAAAATAAAATG
GAAAAGACCCTGGTCATAAGGAAATTATGACCTATTTAAATAAAAAGACAAGAGGATTTT
TGGAGGAAAGAAATATTTACAAAACAGAATTAAATAATCTGTTTTGTGAATAAATACCCC
TCTTAAACATAGTTTTTAAAATCCCTACACATAGCACCACATGCACCAGAAAATACTCTA
AATGATAAACATTTTTCAAACAGGGGTTGAACAAGTAAAACTTGAACTTAGAAAAATAAA
GAGGGAGAGGTTTAGTTGAAACCTAGCTTTTGAAAGATAGGCACTCTTTGCACATCACTT
CACACCACTTGCACTCACCACATCACATACAAAAGGATCAACACAACAACACACATGATG
GCATGAATGATATGGATGCATGAATGCAAAGGAAAAACAAGACATGAGCACATGAAATAA
CACATGGAATATAGCTCTCATAGCAATGACATCATGGACCCACACATGGCAAGGTTCCAA
ATATGGCAAGTTACACTTGGGGCATTACACAATACCTCCAAAAGCTTTAGAAAATTGCCG
CCGAGCCCGAGCACGTGCCCCAGGGTGCCCACATGGTAAATTCGCCCTTGCATTTAACTC
CTCGTTGGGTTCGACACTCTTACTTATCAAAAAATGCTACAAGCGATCCCTTACACTTGT
GGGTTGTTAGCTGACACTCGAGCGGAAGAAGGAGATGGCCGGCATTGCTGCCCACTAGCA
GGCCGACAAGCAGACGGAGGACGTCGACGCCTCAATGAAGGACACGACTAACAATGACCC
AATGCTGCCCTCATCTTCCTCCTCCGCCTCGCCACCCTTTTCCTCCATCATGCCTTCCTC
GTTGGTGCATTGCACCATGACCATCTACGAGGCACGTGCCCATTACATGGACATGGTGTG
GGAGGAGCCGCTCTGGGAGGCGCGAGATGACGCTGCCTACAAACACCTCCTCCTCGAGGA
GCACCTGCAGACGGAGGAGCGGCTCGGTGTTGGCAGGGCGGTCGCACCCTTCACGGACCT
GGCAGAGCAGGAGGCGCTGCTGGAGTCCTACCACTCCATCTGCTAGATTCGCCTCGACCA
TTGGCGGTACCGGCAACGTTGGCGGAGGTGGTGTCCGCGGCCAAGGACGGCAACGAGGAG
GAGGGTGTGTCGTCGTTCGGCTAGACCAGCGACGATGAGGAGGACAACACCGAGCCCCCC
CCCCCCAACGGAGCCGACACGTCCACACACGCTGCCGCACCAACGAGGAGTAGTGCACAG
GAGGTCGCATCTGCTCTGTAAGGCCATCGCTCCTTCCTTCCCGTTGATGCCAAGCTTGGT
GGGTTGAACAACGTCGGTTGATTAATCGCTTGGCGGCGACGTGGAGGTGGGCATCTGTGC
TTGACGGGTCTCCAGAGGAGGAGATTACGGAGGCGGAGCTGCACAAGGCAAAGCTTCAAT
TCTTGGGTTTCATGGCTGGACATGGAGAACGGGCGTCGGCAATAATTTAAATTAGGTATT
AATTATACCTTTAGAGTCAGATTAGGATGTACATGTAATGAAATACATCGTGTTTGCATG
AAATTCGGCTCGTTTGAGTTGTTATCAAAATGTATATGGCTACAGTTGAATATCGTTTTT
TCGCATTCGTGTCCGCGGACTGATCCCTTGTGCATGAACGGATGCGGAAATGAATTTATG
AGTTGCCGATGCCCTTATATTATGGGACGGAGGGAGTAGGATAGATGAGTATGTTCATAA
GTTTCCAATTGTTTTTACGTTGTTCTAAAAAAAAGTTTTTACGTTAATACTACTAACGAA
TTTAAAATCCTTGGAGCGCAATAGAGCCTCAAATAATTGTAGCCATAAACACAGGTCCAA
TCCGAATCAATCCACGATTATTCGAACGCATTTTATATATAGAAATAGACCCAATAAAAA
AATATCATTCGACGAACCACACGTCACGCTGTACCGACAGCGAAATATAGTAAAAGAAAA
AGGCAGCCAAAGATATACTCCTATATAACGTACGTATATACTAAAACGTATCAGCGGAAG
ATAGGAAAACGCCACTCCACTCCACTCCGGCCATGCCGCACCACGCCAGCCGCCAGGCAC
TACCGGATTACCCCGCCTTGCCACTGCCGGACGCCGCCGCCATGCCGCCTCCGCACGGCG
AAGACGACTCCTCCGCGCTTAAACCGCTCATCCCCATGGACCCCACCCCTCCTCCTCCCC
GCCGGGCGACCGCGAGGCTCCACCTGCTCCCTCTCCTCGTCGGCGTGTTGTTCGCCACCT
ACTACCACCTCCTCGTCGCGCCCGCCGCGTCGTACTACCAGTCCCTCTTCCTCTCGCTGG
GCTCCAACGACACCGCCGCCGCGCACCTGCGCGCGCTCACCGTCCGGCCCCACCTCGCGG
GCACCGAGGCCAACGCGCTCGCCGCCGACCACGTCGCCTCCACGCTCTCCTCCCTCTCCT
TCCCCACCCGCGTCACGCCCTACGACGTCCTCCTCTCTTACCCCGTCAGCCGCTCCCTCT
CCCTCTCCGCGCCAGGCCGCAACGCCACCGCCTTCGCGTTGGTCCAGGACACCTACCCCG
GCGACCCCTACGCCGCGGCCTCGGCGGAGGTCGTCCCCACCTTCCTCGCCTACGCGGCGT
CCGGCTCGGCCGCCGCCGAGGTGGTCTACGCCAACTACGGCCGCACGGAGGACTACGCCT
ACCTCGCCTCCCGCGGCGTAAACGTCACCGGGAAGGTCGCCCTCGCGCGCTACGGCAAGG
TGTACCGTGGCGACATCGTGAAGAACGCCCGCGACGCTGGCGCGGCGGCGGCGGTGATAT
TCACCGACGCCAAGGACTACACGCCGGGGAAGGCCTTTCCGGACGGGCCGTGGATGCCGG
CGACGGGCGTGCAGGTGGGGAGCACGTTCAAGGGGGTGGGGGACCCCACGACGCCGATGT
GGGCGTCGTCGGAGGGGTGCGAGCGCGTGAGCGTCGCGGAGGCGATGGCCACGGACGACA
TGCCGGGGGTACCGGCGCTGCCGGTGTCGGGGAGGGACGGGGAGGCGATACTCCGGCTCA
CCGGCGGGGATGTCGCGCCAAAGGATTGGCAAGGCGGCGACGGCGACGGCGTGCCGGTTT
ACCGCCTCGGGCCCGGGCCGGCGGTGCTCAATCTGACCTATACAGTAAGTAAAGTTGCTG
TCAAGGAGATGAGATAGTGTCTGCCTATGCTCTTTTGGGTTCCACTTCCTGACTGACTTG
AGTGATGCTTGTGTGTTTCTTTCCAGGGGAATGAGACGATAGCTACTATTCAGAATGTCA
TTTCAGTGATTGAAGGGAAAGAAGAACCAGACAGGTAAGTAAAGCTCGCCACGTTTCTCC
CTTTTCTGGACAAACCGCTCACCGTTTGCCATACGCTTCACTTCAATGGGGATTCCACTT
CAGTGCCCAACAAACCCCGGCCCCTACTCTCAGCAAGAAATTCAGTATAATATATATTTT
TTTAGAGGTTCCATTAAAAGACTAAATACAGATGTATGTAGACATACTTTAGAGTATAAA
TTTATTCATTTTACTCTGTATGTAGTCCTATATTAAAATCTGACTTGTATTTAGAAACAA
AGGGAGTAGATAACTACATATCCGGTAATAATCATCACCACATACAGGTATGTTATTCTT
GGCAACCATCGCGATGCGTGGACATTTGGGGCAGCTGACCCAAACAGCGGAACGGCAGCC
TTGCTTGAGGTATGGCAAATTCAGTTGCTCTATGCCACCCCTTTGTTTTAGTCTACTAAT
GATCTGGAGGAACACATTGACTTCTTAATTACCACTGAATGTAGCTAGCTCAAAGGCTGT
CTAAGCTACAAAACAAGGGTTGGAGACCTCGTCGAACCATCATTTTGTGTAATTGGGATG
CCGAAGAGTACGGATTGGTCTGTCTCTCTCTCTCTCTCCCTCCCTCTTCCTTGGACTATT
ATCAAGCAGGTCACCTGTCCTTTTCATACTAACTTCTTTACAAAATTGCAGATAGGATCC
ACAGAATGGGTTGAAGAGAACAGAGCAATGCTAACTTCGAGAACTGTTGCTTACCTGAAT
GTAGATGTTGGGGTGTCTGGTTCTGGAGTCGACGCATCAGCCACTCCTCAACTTGATGAG
TTACTTAAGCAGGCGAGTAAAAAGGTATAATAGTTGAAATAGACATGTCTTTTCAGTCAA
CAGCAAAGATATACAATAATGTTTAGGGCAGATCCGGCCCGCTGAGGGTCGCTTGCTTCC
ATGGTGCCATAGCATTTACGTGAGAAGATCTGGAGTCTTTGTGGCAAGACATGGTTTGGC
CAAGGCATTTTTCGCTCATAAGTCATAACCAAACCTTTAGACTAACCAAAATTCCACACT
TCTGACTTTTAAAGGTCATATAGATGGGATAAGTGGGGAATCTAAAAGGTTAGATAGATG
GGTGGTTTTAGAATTAAATATTGGTCTACGC