Contig Data
morexGenes
Links



Map Locations of contig_57977 (5157 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_57977

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70438 1 1351 bp AK375974 Available Available None





CDS Structure of MLOC_70438






Contig Sequence (5157 bp)

>contig_57977 5157 assembly3_WGSMorex_rbca.fasta
GCGGAACACTATCGAGACGAAGCAAAGCAGAAAAGAATCAACACACGATATTCACCATGG
CACATGAACAACATGATGCAGTTCACATATGATGCATGATCAGTTNNNNNNNNNNAAGGC
AGGGCATGACAATTCACAACAGTCAAACGCTACACATTAAGTGAAGCTTAATATGCAACA
TATTGACGAAACTCCGCATTTAATTATTTAGTTCACTCCCATTTATTTACATGGAAATAT
TAAATATTGTTAAACATGGCCCGAGGTGAAGAACAAATAATCTACCTATCTAGGCATTTG
AAATGAGGCCGAAAACGACATATAGCATCTTCGAACTGACCCCACATGTTAACTTTGTAA
TCTATCTAGACCTGTCCTAACCGCATTTTATGTTTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCATTTACATATATGACTCATCTCCATCGGAGCTA
CGATTAATTAACTACGACATAAACCATTTCTATCACGTCGACACGCAAACCAATGCAATC
GGCATGCTAAACAGTTTTAAATATGCANNNNNNNNNNNNAATATTAATCTACGCGAAAAT
CTGGTCAAGTTACATATATAACTCGTTACGATCCGACGCACGGTTTAAATACTACGGGGG
TTTGAAAATATGCTTGTTTTATGAAATTACACAAATCGTTAAACGGGAAAAAAACAAAAA
AAAATTGATTCGGGACGAATCCAACTACGGGATGAAACAGGGGCATGGCGCAACTTAACT
AAATGTCGCCCACGGCGCAATAAAGGGGGGCTGCGGGGGCTCACCTGGGACCGAGGCCCG
GCTGGAGAGGACGGCGAGGGAGGCCGAAAGCTGGCTGGGCCGGGGTGCGGGAGGAACCGG
GGCGGTGGGGAACCTGGTCCGGCAAGGTGGGGGACGGGAGGAGCTCGGGGCTCTCTCCCT
CGGCCGAAGTCGGATCGAGGAGGAGCTCGCTCCTGGCGGCTGCGGGGCTCCTCAGGCTGG
CGGCAACTGCCCGGGCCTGGCGGGCCCTGACCGCGAGGTGGGAGGAGGCTGGCGGCGGCT
GGAGGTGGAAGGCTAGTGGTTGCACAGGTTTCGAGGAGGGATTAGGGTTTGGGTCAAATT
AGGTAGGTGGAGGAGCTATTTGTAGCAGTTTTAGCTAGGTTAGGGGATTTCACACCGGTT
TCGACCACGCGATCGCGATCGGATGGCCCCGGTCATGGGGATAGCTAAGTAAGCTGTGTA
GAATAGGCTAGGTGGGGATGAGAGGGATATTTGCGGCCCGACACGAAGTTTTTAAAACAC
CGAACGTCCGACAATTAAACCGGCTATAGTGCCATTATATAATAAACATAGTTTCAACCC
AATCCGAGAATATTTTCACACACCTTTAAAAACAATATTTTATCGATGTCGCGGGCGTGT
GCCTGTGTGGTTGGTCTTGAAACGGTCAACGGCAAGAATGGAGAAAACCGGCAACTAATG
ACGGATGCAGGTTTTGAAAACTAGTGGCAACGGAGTGCCCATGCAATGTAGATGATGCGC
ATGATGCGATGATGAATGCTATAGACAATCTAATCACACGGCGCAACAGAGTAAAAGGGG
AATTTTCTGGAGCGCCGGTCTCGGGCTGTCACAAGAAGTACACACTAGCATGAAGAGCCG
AGGGACCACACCATGAGGGTTCCCATTCTCATTAGCAACAATCAGTTACAAGATTCACCG
ATTCAGTTTTAATTTAACACCTTCTCTGCTAGTAGGCTACTAGCACAGAGCACCGAACCG
ACTGGCTCGACAAAGTAAAACTATGTGTCCCTATAGTCGTTTATTTCATCTCCGTACCAT
AAGAAACTTGATTCCAATGAACAAGGTAAACAGTATGCATGAAACAAGCCATCAATTAGC
TAGCCATTGTCTCACGTCATGAGTTGATTAGTTCTTGTCAGAACGCAATCTGCTCAATCC
AAATTCATTAATTTAAATATATTTTCATTGATAGAAGAAAAAAAGAATGAATTCAAGCAA
GGGTAAAATACATGTACGAATGCAAGATGGTGTGAACATGGTACCTAGAGCAAAGAGACA
AGAAACACAAGGGGTGCTCGGCTTGAACAAGCAAACAACACAACTAAACGCCCTAACATG
CGACACACTCCTAACCAACGTGACGATTGTGATCCACAAGTCCATCACCGAGGACACCGC
GAGCACATTTGAAAGCACCACAATACCACTGTGTTTCAAGGTCTAATGTCGTCCCTAGCC
CACACTCTCAATCTCTACCGTGATGAGGTGGTTCTTTGGCGCGTTCACCTATGTGGATGA
TGCTTGGCTTGCTTGCTTCAATCATTTTGTCGTGTGGCTTGATGTATCCCCCTATCCCCT
CTCATCTCCTCTCATATATGCTATAAATATCCTTAGGGTTGGCCTAAATAAACCAAAAGA
ATATTCAGTTGGGGAACCTCTCCCCTCGGTGAACATTTGAAGGAAAAAATCCGACCTGAT
CCGTCTCTCGGATTGCTTGGGTGTGCCATGTGCCTCCTCCAACTTCCTTATCTCATACAA
CACTCTTTTCTTCTCTCCCGAACAATGCCTCCTTTTTTCGGCCCTTCTCTTGTGAATTCT
TCCTCTCCCATGGGCTCACCCTGCATGGACAATGGCTCGCATGGCTAGTTCGTTACCACC
ATGGACAATGTTGGGTGACTCTCCCTCCTCTCATCATTTATCAAATCAGAGGCTGAGTTG
GAGCTTGGATCTAGATTTGTTATCGCCTCCAGCTCAATCAATTGTGTTGGAGGGGTAGGG
AGAATTAGTTCGGACTCACCGGTTCTGACAATATTGATGCTCCAACAAGCCATGTTTTTC
ACTGTGAGCTTGAGGTGGTGAGACTACGGACCCAAATGTTAATGTTGCAAGATTAGTGAT
TTTACATTCTTTTATGTTGATCATGTACATTCTGTTGCAAACATATGACCAACATGTTGC
GATCTTGCTGTAAATGTTGTGTTCATGCTACTATTGTTTTCACGTGCTACAAACGTTGGG
TTTACTTGATGCATGTGTTGCTAGGATTCTTTTCAGATTATGCTGCAACCAATGAAGTCT
TGTTGCGTACACATGAAAATATGTTGCATGAGTGTGTTCCATATGTTGGGACACTCTTTT
AATGATGCAGTAGCATTGCAAACATAATATTGCGGCTGGCCCGGGGGGTGTATTTTAGTA
TATCAATTGGCTCAAGATCATGATCTTAACTTTGGTTGAACAGTTTTGGCGCCGGACGAT
ATGGATTTATTTCCGCTCGATCGACCCGTAGCATCCCTCTTATTTTCTCGAACACACACA
CACACACACACNNACACACACACACACACACACTATTTTGTGGTATTTCTGCTAGAAAAT
AAATCTATAATTGCATATAGCTACTATTAGCTCGGAAATGGAAAATGTCCTTTTAAATAA
AAAAAAAGCAACTTGGAGTTAAAAGATCTATTCTTTTTACAGATACATATGTCATTTCTG
CTCTTGGGGCGCCTGAAAATATTTACGAAGAAATATTTTTATTTGTAGGTTTACCCCAAA
GAACACAAATATATGGCGTATTCGTCATAAAAAGGGATGCCAAGTTGCCAACGGCAGAGG
AGGGTCGATCAGGTGAATAGAATCATTTACCAAAATAATTCATGCTTACACTTACCAATA
GAATACTGTATATATTGATATATGTACATACACACTATAGTTGTTGTACACATGAAGCTG
CTAAAAAGAACTTGTACACTGCACATGCAACACATTTTATCTACATACATGAGCACCAAC
ACAGAACATATGTCACAGCGACGGACACGTAGAGGCTTCACACTGTTCTGATCAAGCTAC
TGCACACACAGACACGCAGCTTCTATGGAGTTCGCATGAGCTTCACACTATTCTGATCAA
CTTACTGCACACACACACACAGCTTCCATTGAGTTCTCATGAGCTTCTAGCTAGCAAGCC
ATCTGCTCCCTGCCGAAGGGTGTGATCTCCTCGAACACGGGCAGCCTCCGGTGACTCTTC
CTGTACGGCGGCGCCCACTGCCTGGCCACCGCGTCCAGCAGCTCCGACATCTCGTCGGCC
TCGGCGCCGTCCTCCTCTCCGGCCTCCTTCTCACCGCCGCCTCCACCCATCTCCGCCCTG
ATCCGCTCCAGCAGCTCCTCCGCCTTCCTGACGACCTTCCCGCCGCCGTGCTCCCTCTCC
CTCCCGTCGCGGAACGCGCCGGCGACCACGTAGGCGAGCACCCCCTCGGCGTCCCCCAGC
CGCCCCTGCTCCACGAGGCACACCGCGAGGTTGCACGCCTTGTTGGCGTCGGGCTCCACC
ATCTGCGCCTTGCGGTAGACGGCCTCGGCCGCCATGAAGTTGCGCTGCTGCATGTAGGCC
CAGGCGAGGTTGCCCAGCACCCGGGACGTCTCCTGCTGGACGGAGACGTGGATCTTGCGG
CCGTGGGAGCGGGCGCGCTTGGTGGACTTGCCGGCGGGGAAGGCCTGGCCGTGGTAGATC
CGCCGGAGCTTGTGCTTGAGCAGCTCGATCTCCTCCTTGGTGCGCCCGCTGGCCTTGTAG
AGGTCGAGCAGGATGTTGTCCAGGGACTCCTGCGACTGCTTCCCCGGGCAGAGGTGGCGC
AGCGACCGGATGGCGTCCACGGCGTCGTCCAGGTAGCCACGCTGCTTCATCACCACCGCC
ATGTCCTTGAGCGCGCTGTCCACCTTGTCCCCCGTCTCGATCGCCTTCCAGAACCACGCG
ATCGACGCGTCCAAGTCCTTTTCCACCAGCTGATTTTTCAATAAAGTGCAATGTATATAT
TAATTAATATCAAGATGATACCCGGTATATATACCTTTTGGTTGCACAAGAAGGGGTAAT
ATATAGTTTTTCTATATTAGGGCATCTCCAATAGATGGTTTAAATTTTAGCGGTTTAAAA
CCGGAGATGTAAAATTTAGATCGTCAAAAAATGCATTTTGGAGCTCCAAAAAACGCTCAA
CTCCAACAGATGATTCAAATTGATGGTCCAAAAGAAAAACTCCAATAGATGGTCCAAACT
AAAATGTAAAAATCTAAAAACAGCCGCGCGACTGCTGCCAGCCACTGTTCAGCCGCG