Contig Data
morexGenes
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Map Locations of contig_5791 (6058 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_5791

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70404 4 2386 bp MLOC_70404.1 Available Available LOC_Os06g43270.1, FRAME:-3, EVALUE:0.0, 13106.m04529 protein protein kinase domain containing protein, expressed
MLOC_70403 3 1469 bp MLOC_70403.2 Available Available LOC_Os06g43280.1, FRAME:+2, EVALUE:7e-108, 13106.m04530 protein paxneb-related protein, putative, expressed





CDS Structure of MLOC_70404






CDS Structure of MLOC_70403






Contig Sequence (6058 bp)

>contig_5791 6058 assembly3_WGSMorex_rbca.fasta
CCGCCTCCGGCGTCAAGCTCGGCCCCAACGGCGCCGCCTTCGTCTCCTCCGGCATCCCCG
ACCTCGACAGTAAGCATGTTCCTGCTCATACCATCAGCTCAGATCAAGCAATTTTTTTTA
ATCCAGCTTAGTTACAAAGATCACCTGGAACCGACTGAGGCCATGTCTGCAGTTCAAATC
TCGCGTTTTGGGCCATGAACTGCGAACTAGATACCTTATAGCAGTACAAATTGCCTGCAA
TATGTATGATGAAACCTAGTTCTTGAGGCCAGGAGAACGAAAGATCTTGAACTGGGAGAG
AGGATGCTCTGCCATGGAAGAATGGCTATGTGCACTGGCCAATTAGGTGGCTTTGTTGGT
GCTCATCAGGTCGGAGCGATTTACCAGCGTTTCTGTGGCAGGGATCCTGGGCGGCGGCTT
CCTCCTCGGCTCGGTTGTGATGGTCATGGAGGACTCTGACGCGCCGCACCACCTCCTCCT
GCTCCGTGCCTTCATGGCGCAGGGCGTTGTGCACAAGCAGCCCCTGCTCTTCGCCGCGCC
CATGAAGGAGCCCCGCTTGTTCCTCGGCGCGCTGCCTGCTCCGGTGGCATCCTCGAAGGA
GGACACGCGGCAGAGGGCGATGGGGGGTGGTGCAGCTGCCGACGGACGAGCAGGCGTATG
TCTGTATTTTGGAAGAAATGTGTTTTGAAGTGAATATATGTTCTGAACATGTTTTCTGAT
TGATCTGGATATGGACTGTAATTGTGCAGGATGAGGGTTTGAGGATAGCTTGGCAGTATA
GGAAATATTTCGGGGACGATAGGAATTCCAGTGCTGAACACAGAGGTGATTCGCTAATAC
TTCCCTTTCCTTTGTTTACTTGAGGGTTAGTTGTCTTAAAGAGCCATCGTCTCTGTGTCA
AAAGGAAAAATTGGATGATGTTCTAGACGTTTTTAAGATGAAATAAGTATCACATTGTCA
GTGTACTTTCCGGCTGATGCTAACGGAACAACAACTATATTCATGCGACCTGTTATAATT
TACTTATATGCTATTTTATTTAAGCTATTTTTACTGTCTTGCAATATGCTTTTAAAAGAT
TGGCTGACTCATTTAGCAATCTTGCAGACAACAAGCAGGAATTTAGCCATGATTTTGATT
TACGGAAGCCCCTCGAACGGCATTTGCTTAACGCGCAGCAGATTGAATGTTTAAGCACTC
AAGACGTGGACACTCTCCGAGGCCTCCATGATCGTTGTTCTGCTTTCTTATTCAAACATC
AAAGGTGAGGTTGATTCCTGGATATATTGTTGAGCTTGTTATCTCAGACTGATCTGCCTC
AAGATGACATTGATTGTTTAATGAGCACAAAAGTGGAGTTGTATAAGACCTGATGTGTTT
TTCCGTGTTGCTTGTAACATATCTCGTGTTTTCTGAATTCAGAAAAGATGGTGTGAATCT
GAGTGCAGGACGTATTGCTATACAGTCACTCTGTGCACCACAGTGTGGATATTTTGAGAA
GGCAAGTATTTGCTTGAAATGATGTATGCTGACTGGTCGAAATGATGCAGCTCACTGAAA
ATTTTAAGCTTCCTCACTTCCAAATCAATTCTGACATAGTAAATTGTTTACGCATGGCAG
GACTGGGAGATGGTCTCGTTTCTCAGATCACTGAAGGCCATGGTGCGGTCATCTAACGCC
GTTGCTATTATAACATTTCCATACACAGTCCTATCAGATTCTTTCTGCAAGAGATGGCAG
CATCTAGCAGACACGCTGCTGTCAATAAAAGCAATCCCAGGCAAGCCAAATACTTCAGAA
TCTGTTTTCATGATTGCAACTTGACTGCCGACCATGCATGGCCTGATTGCTCATCTCCCT
GATCATTAGATGAGGACAAGGACTTGGCGAAACTCCTCACGGGGTATCAAGATATGGTTG
GTTTTCTGCATGTTCATAAGGTGGCACAGACCAACAGCCAGGTACCCACTCAAGTTGATA
CAGGCTCATAGCTGCTGTAAACAAAGCTTGCGCTCTTCTGTTTCGACGACGCCATTTACA
TCAATATGCAGGTTCCTGTGATACTAGAGGCGTCCACATTTTCTCTGAAGCTGCGGAAGA
GGAGGTCGCTGGTGCTAGAACGGTTGAATCAGGCCCCGGTGGATGGGTCGAGCGGGCCTT
CATCTGGTGGTGCATCAGGCAGTTGCTCCTCGTCGACGCAAGGCTCACAGCTCGATTTCT
AGCTGGGACTCCTGGAGCTACCCTTTGAGAATAGAGAGGGAAGCATCCACTGGAGCATCT
TCTCCAGTTCTTCAGCTTCTGTAGGATACTGGAAACCTGGAATAGCTGAGAAAGGCTCCT
CGTTGTGTAATATGTTACTGAAAATGCAACTTTTGGAGATTTTGTTTTGGTTTTGGTATG
GATACAGCCTATTCATTATCATCTCATGTATCATTCAGTTCTGGTGTATGACACTTTCAA
TATACATGTATTCTGGAAGGTTTAGATTGTACTCCCTAAACTAATATAAGATCACTAGCA
TCTACAGCTGGACTTAACAAATATGACACTTTAAATGCCCGCGAACATGCGCCGGGTGTG
TCCATTTTGAGCCCCTATTTTGCTCGTGATTGATGCAGAAAGAGAGAGAGAAAGAAGAAA
ATGGATAGAAAAAAAAAGTAATGGATAGAAAAAAAAAGTAAAGATTGTTCGGGGTGGGTC
TCTTCCTACGTGACGGACTGACCGGACATATTCTCCCTACATTTAAGATGGATATAAAGG
GTGCTGCCGTCTAGGAAGGAAGTGAGGGATCCGGTTGGGTCAATTTCTTTTGACCGGACA
TTGACCGGGAGGACGCTTTGGGCGTTTAAGGAGGATATATATCTAAGAGTTGTAGATGCT
CTTAGATAACTACTTTTGTGATCTAAACGTTTTTATATTAGCTTACAAAGGGAGTGCAAG
ATATGCTGGTTATCATTTAGTAGGGTTATGTGCTGTTGATGAACATCAGGTAATTTCAGA
AGATGTTTGTTCTTGAGCAAAGTGATAAGTTTGCAGAAACATGAACTGGCTATAAACTAA
TAACTAACATGCCTGAGGTGACGAAAACAATCAGACAAGAAGAGAGAACCTCATGTAGTT
GCATACTTCTAGAGCTGAGGTGCAAAGATAGACACATATTTACAAGGTTTAGGCAAGGTA
GAAAGCTTCAGTCCTAAATATACACAGAACAACTTGTTCAGAGCGTCACATAATCCGAGA
TACTTCAGGCTCCATCCAACATTGCTTTTGCAGTTTTACCCAGAAGGTGCAGCACCATCT
CCGAAAAGCATGTTTGCGACTGGTGGTGGCAGCCACGCTGTGCTGACACTGTTGTGCACT
TCGTGCTGCTGAACTTTCAGAGGATCGGCACCCTGATCGGAGACGCTGGCGACCTTTCGA
CTCCTTGGCCTTGTGATGCTCTTGCCGACAAAGATGCCTAGCTTCATAGCAGTAAAGAAA
CCTATGGCGATGAACAGAGGCCTCACCGCCCAATGGAAGTCCTCGAGGTGCCCGTACTTC
TTCACGACCCCCTCACACTTGTCGAAGCTCACCACCTCCACCTCAGAAGGGTCGGCCAAG
CAGCTGCACACTTCGCCGAGGCTGAATTTGCCAGGGAAGGTCACAACAAGGCATCCATTC
GAGATTATCTGTGAAATACGACCTGTGGCAAACACCCCACCTCTCTTTCGCGGCCATTCG
AACCGGGGGCTTGAAGTGTGAGGTCTCAGCCTCACAAATTGCCCAACACAGTAGGCTTCG
GCCATCTGGAGATCTGAATATCCCCCCTTCCAGAGGGTGTCCATTCCTATCAAACCAACA
TATACGGTGCCATTACGGTCAATGCTATGAAGAATTCCGACCTGAGACCGCTTCTTGTCT
TCCTCCCTAAGCCTTACCCAGTCTCCGGCAGCGAAACCATAGGTCACCCTTTCCACTGTC
GAGGAACGGATCTTCAAAGGGTCGTGGATTCCATGGACTCGTACAAGAATGTAGCTATCA
CATTCTCCATCCTCCATGCCAACTATGGTTCCATCAGGGATTTCCATTGTTTCAGGAGTA
CAAGAATTTTTAACCTTTCTCGAGCGGACCTTGTCACCAACTTGCAACTTATCCTTAAAG
TGTGACCAATTGGTGTGACTTGGCACTACTACCCCTGGGTTTTCAGAACTATCCCAGCCA
TTGTTGTCATAATCCACATCTTTAGCACTGAAGAAATGAAAAAAGAAAACAAATTTAGGG
AAACATGCAGAGGAAACTACTACCAGGGCATAGTAAAAATATAACTATGGAAGAAAATAA
ACGGGCATTCACCAGATATGACATATGACTATAAACAACACAACTAGGAAAGAAGTTCCA
TGCTTTCATGTGACAAATTTCAATAATGTTAACCAAATACGGCAAGTTGATAAGGCAGAA
GCAGAAAGAGAGTTTTGCATATTACCTTTCAAATGCTTGTAAGATATCTGACATCAAGGG
GCGATCCCGGAAGTCATACTCAAAGCAGCCAAAAAGGACATTCTCAACCTCTGCAGGTAA
ATTGTACGGGAAGATTGGTTTCTCTTTCTTCAGGACAACCAACTGATAAATCTCATCTGG
TGATTTGCCACCCCAAGGCTGAACGCCACTGAACATCTCAAGAATGCTGCAGGCAAAGCC
CCATGAGTCTGTCTCGTAACTAATTGGACCTCTGATGTTTGGTTGCCATTGCTCTGGGGC
CATGTAATTTGGAGTCCCAAGTCTTTGGATAAGCTCTGGGTTTGGCAGCGAAAGTCCAAA
CAGCAAGGATGGAATCCCAAAATCCCCCAGCACAGCATGATCATTGTCATCAAGAAGAAA
ATTACAAGGCTTAAGATTAAGAACAAATATTCCCCTGGAGTGTAGGTCTAGCACACCACG
CGCCAAGTCAGCGCCATATCTGCAAGTTACAAGAATTCATAAAATATGTAGTAGTAAAAA
AAAATCCTCTAAACAGAGCATCATAAGCATTCTCAGAAGTCAACAGGATAATGTGCCTGC
ACTAAGGTGATAAAGGATATATGTCGATATGTTCAACAAATAACTGCTAGAAAGTTGGAA
AGTGCATGCTTAGGTGACCTCCATCTAAAAAATTGGTATATTAGCCTCTGCGGTAACTGT
ATTCTTATGATAAGACAACGAACATTCAGTATTCAGAACATCAAATATCTACAAAACTGT
GGAGACTTCCACCATATATACCTTAAAACATCTGACAAAGGGAGCCTTCCACCTTTAAGC
CGAGCCATCCTGTCCCCGATGGATCCTTCGTAGAACTTCATCGCTATGCAAAGCTGAAAA
TCCATGAAACAAAAAGTGAGCCACGACAATATCTTTCAGTTCCTACACGATCCAACAGCA
AGGCTCTCTGGCAGACAAAGAACACACCCTCCCATTCTGCGTGGAGATCCCGTGTAGGAA
GCAGACATTGCCCAGGCCCTGGCATTTGCCAAAGACCTCGTCGAACCTCGCCGAGAACAC
CTGCAGCTGGTCGTCCCTGACCGGGTGCAGCATCTTCACAGCGACCTCGTGGTACCGGTC
ATAATCCTCCGTCCTCTGGTGGTGTGTGGCTATCCAGACGTCCCCGAAGGGGCCTCTCCC
GATCCGGTGCTTCAGATTCAGCACCGCCGGGTCGATCCACGGGCTTATCTGGCTCGGGCC
GGAGAAGACCGTTCGGTAGTGATCGGGGTCCTTCTCCAGCAGCATGTACTCGAACGACTC
GGTGTCGGCCGGCTGGGAGGCTGCCATTCCTGCAATCAGAAAAATTCACCATTGGTTTCT
CAACAACAGGTACAGAGTACAGACTACAGAATCACCAACACTGTAAACTGGGAGCTTATA
TTTTCACTAATCAATAATAATGTCTTGTTTCTTGGGCACAGCTCAACAGAGAACAACTAG
ACGCAAGATCCCTGCTACGACATTCACACTCAACTGTAAAACTGGGAGCTTGGTGCAGGC
TGCAGGGGGTGCGCAAAATTCAGCGCAGATACAAGCAGCAAACCCGCTCAAGAACCGT