Contig Data
morexGenes
Links



Map Locations of contig_57772 (3637 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57772

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70320 1 1208 bp MLOC_70320.1 Available Available LOC_Os10g38710.1, FRAME:-2, EVALUE:1e-83, 13110.m03526 protein glutathione S-transferase, putative, expressed





CDS Structure of MLOC_70320






Contig Sequence (3637 bp)

>contig_57772 3637 assembly3_WGSMorex_rbca.fasta
AGTCAACTAGAAGCGCACTAGGGACAATGTGTTGTCTATGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTACAAATCTAGCATGGATAATAAATGATTACCATGAACAAGGAAATANN
NNNNNNNNNNNNNNNNNNNNNNNNNNAGGGCATATTTCCAACAATTACATGGGATGCTTC
TACTTGCAACTACTTGGTCAATGGACACAACTACGCGATGGGTTACTACCTTGCGGATGG
CATCTATTCACAATGGGTCAGCTTGGCCAAAAAAATTCCACGTCCACAATATAACAAAAA
TATTCAGTTTGCCCAATGTCAAGAAGCTGCTAGGAAAGATGTGGAGAGAGCCTCCAGTGT
GCTTCAGAAGCGCCTTGCAATTGTTCATGGCCATGTTGAGTACGGGAACTCAAAGGTTCT
ATGGCGGATCATGACTTGTTGCATCATATTGCATGACATGATCATTGAATACAAGAGGGA
TATGCGTGATAACTTTTCGTACATCACCAACGGGACTTTGGTTGACCCTGGTTGACCCAG
GGTATGATACAAACATGATCCTCACATTCATACTCGGCTCGGCTCCAACAAGATCGAGAA
CCGACAAGTTCATACTCGGCTCCAACAAGTCTTATTAAGTTCATACTCGGCTCCAACAAG
TCTTATTAAGTTCATACTCGGCTCCAACAAGATCTTATTAAGCATCACTCGCAATGTCTT
AGCGAGTCCTAGTTATTCTATCACATGTTTGTTACATTCGAACCATTCAACATGTTTAAA
TTTGAATAATTTGGTTCATAAACTTTGGATTTGGTTTGTATGCTCTATTCGTGATTTGCT
TGAATATTCATATTTATATTTAAACATGAATATGTGTGCTAATATAAAGTTGCAAGAAAA
GTTTTAATAAATGAAAATTTACTCCATTATATATAGGGGATCAACTAGGTCGGGCCAAAA
TTTTGTGGAGTAAGAGCATCAACAACCGGGCGTCATAAGCCGGCCTAAAAAGCACGGGCG
GCCCGTCGAGTCACTGACTGATCACGAAAATCTGACCCAAACGGGTGCCTCAAACGGGTC
TCAAACGCCTGGGCTGACCAACACCGCTCACATCCAACCCAAATATGGGGCGGATATGGA
CGCGCGCGGGCGTGCTTGCCACGTAGGACTGACGAAGGGGTCCCCCTCGGAATTACCCGA
GAACCTGGCAGTCCAAAGAACACCTCCTCCGTCGCCGTGGTGTGAACGCCGCGTGGCGCT
GCTCCGGCTCACCGCTTGAGGACAAATCTGGCTATTTAAGCTGGCCAACGTCCCCAGCCC
TAGCCCATCCACGTCCTACGTCTCTATGCCGTCACCTGAGCCAGTCCGCCCCCTCTCCCA
CACTCTACCACGCTCACCGGCATCGCCATGGTCTTGGGGAAGATCACCACCTACGCGATG
CTCACGCCGGAGTGCCGGAGGCAGATCGAGGAGGAGATTCAGGCCAAGCGTGCCACCTGC
ATCGCTATCGGTCTGCCTCAGCACCCCCTAGAGCCAGAGAAGGAGGAGGGCGAGGGAGAG
CAGCAACCGGAGGCGATGGAGGTGACAGATCTGGAGGAGGACGAGGCGGATCAGCCTGCT
ACGGGGTTCAACATGGCGGAGGCGGAGGCAGAGTTCATCGTTGCCCAAGCCGAGGAGATG
GCTGAGCAAGAGGCCATCCTGGAATCCAGCCAGGATAAGGCATATGTGGAGGCCAACCGA
CACTTCCTCCAGCAGAAGTAGGCAGAGGCCGACCTGTACTTTGTCGAACTCGACGCAGAC
ATGAAGGAGGAAGAGGCCGGAGCCGAGCAGCTGGAGGCGCCGGAGGAGACGGAGCTGGAG
GTGCCACCTTGTTCCCGCAGGAGGGCACAGAGATAGTCGACATCTTCGGCGAGGAGTAGC
TAGGTGATCTATGTAGTACATACATTTTTTTGTTTGTATGCTTTTGAATGGATTTTAGAA
TCTAGTATGAGGTGTTTGGATGTAGTTGTCTTAATCTGAGACATGTCCGGACATTCACTG
CGGACTCGCACGAATCCGTCCGTTGATGTTAAGGGGGTCATATTTATCATACTTGGCTGT
AGATGCTCCAAATATACTTCACTAAAAGTTCAAGATGCCGGATACTACTCTATTTATAAG
GGATTGGTTAGAAATGTCAAGGATGTAGCATAATTCATGTCAAAAAATAAAGAGTATAAC
CACATCTTTTACAAAAAATACAATACCGTCTTATTATGCAATGAAATCGATCATACAACT
TAGAGGAGTGAAATTCACAGTACTTCATATAGGTAACTAATACTCATAAAGTAATAATTA
ACGTGACGACTGACGCTAATGTAAAAAAAAGGTGACGACTGCAAAACCTCCAAACAGAAG
TGACGACCGAAAAATAAAGAAGCTCCTCCGAGCTAGCCAATAATTACTTGGCAGCCGCCG
CAGCCCACATAGCCCGCAGCTTCTCGGCCTCCTCCAACATGCTTTCCATGGGTGGCGCCG
CCTTCTTTGCAGCCTCCGTCTCCACGAACCTCTCAGCCCAGGCGGCCAGGCGCGGGGTCC
TGCCGGCGTCGATGACAGTGATGCCGAACATGTGGCGCAGCGCCTCGATCCAGAAGAGGT
TGCACCCGAGCGCGAGGTCCACGTACCCGATGGAGTCGCCGGCGAAGAAGGCCTTCCCGC
CAGAGCACTGGGCGAAGGCGTCCTCCAATGGCGCGACGGCCGCGAGCGCAGCGGCCAGCC
TCTCCGCCCTGTCCTCCTCCGTGGCCGCCCTCATGATCCCTATCCACGTGGGGACAGCCT
TGTCGTCGACGTAGGCGGCCCAGAAGCGGGCGACGGCGCGGTCATAGGGATCGGCGGGGA
GGAGCGAGGCGGCGCCGGCCCAGACCTCGTCGATGTACTCGACGATGGCGAGCGACTCGC
AGACGGGCCTGCCGGCGTGGATGAGCACGGGGACCGCCTTGCGCACCGGGTTGGAGGCGA
GGAGGAGCTCGCCCTTGTGGAACAGGTCCTGCTCCAGGTACTCGTAGCTCACGCCCTTGG
CGTGCAGCGCCATGCGCACGCGGATCGCAAACATGCTCGCCGCCGTGCCCAGTACCTTGA
CATCATCTCCTTCGTTGGCCATCTCTTTCGATCTTCTTCTTCTTCGTCAACTATTTGCTC
TGATGTGCACGTACGTATGTGCTCTAAGTTTAACTCAATTTCCAAGTGTACGTATATGGC
TTCGTTGTTGTGGTTTATATAGCGCAAATCAAGACGAGCAGCTGTTGGTAGAGAAGCTGA
TAGACACATGGCAATAGTATTGGGTCTCTATATGTGCATCACCCCATACGCACGCGATCA
TCTCAGAATTTCTTAGTCACCCAAAAGTAAGGTTGACTAGCTTGGCGTCACACGTGACGC
TTCAGTGTTGGACGATCTTCCCGGCGGCATGCCCTGCCAATGGTTCTTCTCTTGCGTTGT
CGGTTTTCTGTAGCGACGAGACTCGGTCCACTCATCCGGGGAGCAGTAGCAAACGCAGCA
TTGCTGCTGCTGCTACCACTACTCCTAATATTTTGATGCTACTACACAACAGATTTTAGG
GAGAACTGAAAAGATGGCTTTCCTCACATCCCTCTCG