Map Locations of contig_57756 (4514 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_57756

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70308 3 1076 bp AK376587 Available Available None





CDS Structure of MLOC_70308






Contig Sequence (4514 bp)

>contig_57756 4514 assembly3_WGSMorex_rbca.fasta
GGGTCGCCCAACCCGCGACAGTTCCAACATAAGATCGACATTAGGCCCGGCGATCCTCCT
CGAGGGAGGTCGTCGATGCTGCCAATGTTTGGTGTGATGTATCTGCCGCCTCCCGATTGT
TAGACTTAACCGGGGAGGCTGTTTTCTTTGCCTTCTTTAACTCTCTTGGAGAAATATACG
CCGGCGGTGGCGGTGGCGTATCTGAAATTTGGATGTCTGCAGGTATCCCAGCTCCTAATG
CATGATCCTTGGCCTGAGCCAGATTTAGAGTTGAGCTAGAAGCCTCTTGTGCACAAATAT
TTCGCTGATCTTGACTGGCCGGCAGAGTTAAGTTCAGGCTCCGCCGAGCTCCGGGTTCAG
TCTCCTGCACTTCTCCGCCCGCCACTTTTGATTTTAGAGGGCTTGTAACATCTTCCTCAT
CACCTTGTCCCGCATCCAGGCCGGCCTCTTGTGAGGATCTCTTGCGCAGAGGAGACTTCT
GACGAGGATTAGGATCACGCCCCCTCCCACCTGCTCTACCGCGTCCCCTGGCTCAACCAC
GAGCAGCATAGTCTTCATCTTTCGGCCCTGGCGCTGCCTCCTTACGCTGCGCCAGCATCC
ACCTTCCCCATTGCTTCTGCTTCGCCTCCCAAACGCCATCTCCGCACTCCTCATGGTTGT
GCCCCATAAGACCACACACTTGACAAAAATATGGTATTTTCTCATACTTAACAAGGAACA
TACGTCGGCCCTCTCCCGTGACTGTCAACGGCGCGACTCTAGTAAGAGGCTTGCCCACGA
GCACACGCGTTCTGACTCGTACATAATCGCCCTCATAGAACAACCTTGGCGACAACTGAG
TTTCCTTGACTCTACCAATACGGCGAGCAAGTTGATCTACAATTTCTGCGCTTCGGTACA
TGTCAGGGATCCCATGAATCTGAGCCCAAACGTATAGACCATCCAGGACCACCGAAGTAG
GGTCCTTCTTCCCATCGTAATCCTCTACTATGAGTCCCATGCCACGGAATAGCCATGGAC
CGCCATGGACGACCTTCTTCCAATCCCCCAGACAAAACATCTGGAACACAAAGAGGTTGT
CTCCAGCTTCTCCGCACTTCGGGATTTTAGCCAATCCCCATACAGATTTTAGGGTTTCGA
ACATAGTCGACGATGAAAAGGATCGTGAGGTGTTAAGTCTTCCAATCGCGAGCCACCTAG
CATCCGCCACAAGTTTCTTAACCTCCGCTTCTCCCACCACCACATCATCTAGCTCTTCAT
CCTTCAAGTCCAGGTGCTGCAACATGTCTTCCAGATTCTTCCCGTTCCATCCAAAGGAAG
AGGATGACCCACGTCCTCCGCCATTGGCACGGAGAACCTTCTTGCGGCCTCGCGGACGAC
GTCAAGGAGTCTTGCCGGAGAGATCTCAACTGATAGATGGAAACTCTCGACGGCGACCTA
ATCGCCGTCGGAGGTCTAAAACCCTAAGCGAGAGGTCCGTGCGCGACGGAAGAAACTAAG
CGGCCAGATTGCCTCTCGATTTAGTTAGACAGCCTTAATACACGTCCGCGCATGCATGTT
CACACATGGATCGCGTCGATTACTAAATATGCCTCTGCCGACCGCGCCGGGCCAGGCCAC
AGGCCGTGCTCGTGCCGTGCCGGGCCGCCCGTTTGATGAGGTATTGTCTGCGTGCGAGCC
AGAGCAGCCGATGCCCTGGGCTGCGCCCTAGGATAGTCAGCTTCGCAGCAGCGCCTGATG
AGCATGCTCCGCCGCGCTCTCCTCCTCGGCCACCGCCACCGCCAAGGCTTCTCCTCGGGT
GCGGACCTGCCTCCGCCGCGCCCATCTGTCAGCCGCCGCGTGGTCGTAACGGGGCTGGGC
GCCGTCACGCCGCTCGGCCGCGGCGTCGGGTCCACCTGGGACCGCCTCGTGGACGGAGAC
TGCGCGGTGCGCGCGCTCGCTGCGGAGGACCTACGCCTCACTGGGGATGCCGCGGGGAGG
ACGCTGGAGCAGCTCCCATCCAGAGTCGCCGCCGCCGTGCCGCGCGGGAAGGGCGAGGCC
GAGTTCGACGAGGAGGCGTGGACCAAGGTTTATGACTGACACTTCACGAGCCCCTAACCA
TCCAGTATACATTGGTTGCCCCACTGTTGTTGTGAGATTGGATTGGCGATCTTTTTTCCT
GCACATGATTGTTCCACATGTAATTTATCATACATGAATTGCTAGTTGACATGCTTGATA
TAATTGGTTGGAGAATGGATTTCATGTATAAGCCGCTCAAGAGAAATTTGAACAAGGCTG
TTACGTTTCACCGTACTATACAAGCTTTCCCGTAGAGAATGCCGCAATACAGTCATGTGA
TAACTGGAACAGATGTAAGGACCCCTATCTTCAGTGCCATTAGGAGTGACAGTCTTCAAT
GCCACAGCACTTTGCTGAACCTGTTTTTGGCGTTTCTTCTGTCAGATATATGTATGGTTT
AAGTAGATAGACTGTCTCTCTCTCTTCTACAACTGGAAATCTGTTGTGTTCTGATGAGAT
GCCACCGTGTGACCTGTAATATGTAACTGGTGATGTTGTCTGTCTCATAGTTGAACTTTT
GTTTCGTACTTCGAACCGTTGATTGAACATTTTTGTTTCCAGGACAGTAGATCAGTATCG
GGGTTTATAGCATATGCTCTATGTGCAGCTGATGAGGCTTTGAGAGATGCAAATTGGCTG
CCTTCGGAAAATGAAAAGAGAGAAAGAACGGTACCTATTGCTTTTGCTGGAAGCTCTTTT
CCTTTTTCTTGTGTGTAATTGCCGAGTTGCTGCATCTGATTAGAACTTTTATCAGGGTGT
TTCAATTGGTGGGGGAATCGGAAGCATCTCAGACATTTTAGATGCATCACAGCTGATTGC
TGAAAATGTTAGTACCCACAGTCACTGAATTTTCTGCTTTATTCTTGTTACTCTATTCCT
TTTGTATTGTTAGTCATTGTGCATCTATAATGATTCTCACTATTATTATATTGCTATGTG
CTGAATGAGAAATACAGTGTTAGATGCAAGTAAAATAATGGGGGCTACCGGCTGGCCACT
GGCATTACTGATGGGTGCCAGTAGCATTAAGAGAATTTTTTCATCTGATGTTAGCAACTC
AAGTACTCCCTCCATTCACAAATATAAGATGTTCTAAACTTTTCTGAATCGGATGCATAT
AGACACGTTTTAGTGTGTCTGTTCATTCATTTCAGTCTGTATGTAGTCCATATTGAAATA
TCAAAATTCGAAAACATCTTATATTTGTGAATGGACGGACTAAGTTTGAAGAAAATTGTG
AGAAGATATGTTATTTAATCAATGAACAGGGAACTGAGCGCTAACCGGCCAGGAACGGGA
TACATTGAATTTTTAGTTTACACTTGATAATTGAAACTGGCCATTACAAAACTGCTTGTT
GGTGAATGCTACTGGCCAAGACCAGCACTTCGTCATATCTGAATTTTGAATTCTTCGTTC
ACCGAGAATCAGTTAATTGGATAAATGCCACTCGAATTCTGGCGATTCCGAGAAACGCCA
CTGCAATTTCCAAACTTTGGAAAATGTCATTTCCAGTGGCATTTTCAAAGTCTGCAGTGG
CGTTTTTCAAAGTTTGCAAAATTTTGCAGTGGCGTTTTTCATAGTTTGGAAATTGCAGTG
GCGTTTCTCGGAATCGCCAGAATTCGAGTGGCATTTATCCAATTAACCCGACATTTTTTA
CGTCTCCCCCAAAGCTTTGACCTGCACCATACATGGCTTGCAATATAACTGATTATCTTC
TGCCCACTTCCAGCACTGACGTGTGGAATTTATTTTCTTCTGAGTGCAGCGTCTACGTCG
TCTCAGCCCATTCTTCATCCCCAAGATTTTGATCAACATGGCATCAGGTCATGTCAGCAT
GAAATATGGTTTCCAGGTGAACATTGTTACTGTTATATGCCTTAGTTCAGGATTTTGTTT
CCATTTTGTACAATTATTGCATGAATAACATTGATATTTAATGCTTCAAACTTAGGGTCC
AAACCATGCTGCCGTGACAGCTTGTGCCACAGGCGCTCACTCTATTGGTGACGCTACACG
GATGATTCAATTTGGAGATGCAGATGTGATGGTGGCTGGAGGAACAGAGTCTAGTATTGA
TGCTTTATCTATAGCTGGATTTTCTAGGCAAGTATGTTCGCGTCTTCACAATTGTTTTGT
TTTGCTTAATTTCCCAAATACTCTGTCTAGATGTTCCCTAGGGCAATTATAAATTGCCTC
AATTGCTTTACTGAGGTTCCAATGTACACCTGTTGACTGAAGGTTGCAGGACAAAGTAGA
GAACACATGTCTTTGTCCACAAACCACTGATGGTCGTGGCTCATAAAATCATAGGCAAAT
TTAATCTGTTTCTTTCCAGAAAAACTTAGTTACAGTCACGCTCTTGCACTTTTTTTTCTT
CGAGAAAACGCAAAAAGCCTTTGCGTTTCATTGTATTGAAAAGAAAGGGGGGGGGGGTTA
CATCCTCCTAAGAG