| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_57742
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_70298 |
1 |
1172 bp |
None |
Available |
Available |
LOC_Os04g52710.3, FRAME:+3, EVALUE:1e-36, 13104.m05415 protein imidazoleglycerol-phosphate dehydratase, putative, expressed |
CDS Structure of MLOC_70298
Contig Sequence (6412 bp)
>contig_57742 6412 assembly3_WGSMorex_rbca.fasta
AATCCAAGTGTGCCAGTGCAATCCTTTTTGCACTTGAAGTAGCTGTCGAACTCCCTGGTG
GAATTCACAATCCCGAGGAAGAGCTTCCAGCTCATACGATAACGATGCTGAAATACTTTA
TCGTCGTGCAGAGGAGCGTCTGCGAAGTAGTCGGCGTAGAGCAAGCAACAACCTTCCAGT
CGATGCCTCTGCTTTGCCTTCAGACGACTCTGCGTCGAGCCACCTCACCGTGGCTTTGCA
TTGCTCGCGAACAAGCCGGCGAGAGAGGCGAGGACCAGGAGGTGCTATTCATCCTGGGCG
TCGGCATCGGCTTCCTCCTCCGGTAGCGTCGCGAACGCCTCCTCGTCGCTGGAGTCCATC
GCCCAGGCAAATTGCCGAACACCTGGCTGGCGTGGCAGATGCACGACCGCATACGTGCCC
GAAGTGCCGGGAAAACTCGCCAAGAAGCGGGGGCGGGGGAGGGGGAAAAGCCGTGGCGAA
CCCTACGTCCGTCAACGACCTTTGTAGCGACTGTAGGGCACGGTGGCGGCGCCAGAATCG
GCATGGTGGCGAAAGGTGTGGTGCGCGAGGGGCGGTTCCGAAGAAGAAAAGGCCTTTTTC
GCCTGACAGGAGGCCCGACGCGCCGTTTTTCCTTTCGCCGGTGTCCCCGGGCGCCCCCCA
ACGCTGTGGGTTCGGGCTGGGACCGCCGGGGCCAATTTCGGCCCTAACCGGCGAAAAACC
GGCTCGTGAGGGCAAGACTGGGCCGTTTTCCCCTCGCCGGCGGAAAAAATGGCCTAGAGA
GGGCATGTTGGGGGCGCGGATGGAGATGCTCTTATGGCTTACTATTGTGTTCACTTTTTT
CTTACGTACATGTATTGTGTTCTAGAACCAACAAAAACACTAATTAAGGGGATATCTCTT
GTAAATGTCACTCATGCGTTCTGTAATTGTGTAATATTGACAATTATTGCATCACATGTC
ACAACATGAGAGTTTTAGAAAGAATTTTTCCCACGGGAGAGATGGATGGTTTGTTTGTGA
TTTTCTAGATCCAATTATTGAAAATAATTTATCTCTTGAACCATGGTTCCAAATCATGAA
CCGTTTTAACTCTTGCGTTCCTTGCGTCGAGATCCTTGTGAAACTAGATCACATGTTAAT
ATATTGAATGAATTTTTTTTTCAACCGAACTTCGTGCTTTCAAATTGAACTAACATGTGC
TTTCAAATTGTACTAACTCTTGCTCCCATGGGATAAAGAACAACTCCGCTCTTGCAAAAA
TAAGCACACATGTATTCCTCCATTGTACTTCCCAAGTAAATTAGCTCTACGATGCCCTTC
AAGTTTAGCTCTAGGATCCAAGATAAATGCAAATGCATACAAAGTGGAATATGTTCTCAA
TATTTTAAGTAATTGGTTTTCATGTTAGCAACAACATTAAGTAATAATCCATCACCTTCA
TATGCTTTCAGATGACTAGCGATGTCTAATATGGTATGCACCATCAACGGAGATGTGTGG
TAATAAACCCAAGACAAAGTAATTTTTGCATCATAAAACAACTCAAGAAATGCAGTCAAT
GTTGTAATAACATGCCAAGTTTAGAGGATCAACCCCATAATTTACATTAATAAAACCATT
GAACGGAACTCTCTCTCGAATAACTGCCTTAAGCATAAAATATGTAGAGTTTCATCTAGC
AGACATGTCGGAATTAAACTTATGAGGAGTTGCACCTATACAAATGCAATATCTCTTATA
GTTTGAAACTCGTTGAGTTGAATGTGAAAGATAAGATATTGCAGTGCATATGCATTCAAT
GTGTGGTTCACATAAATGTAAAGCACCTTTATCAATAAGATTAATGATATGGTAAGCACA
ATGTTGATGCATTAAAAAGGATGTAGCATATGCGAAGAATATAGGAGTCAGGGTGTTCAT
TACACTGGTGTTTGCTGAAGCATTTTTCAAAGTTATTGCGAAAACCTTGTCGGCAAGATC
AAAATCATTCACAACTTTGACTACAGCTTCAACAATGTTTGGACCACTATGTGATACATC
TATTAATTCAAATCATTTGACTCTTTTTGTAGATGCCAATGTTCATTAACATAATAAGCT
ACCACACTAATGTAGTCTTGCTTTGCCCGACGAGTCCATATATCAGATGTTAATGATACT
GAAAAAGTGCACGTAGAAAATTCATCTTTTATTTTATCTTTACCAATGTGGCAAAGCTTT
TTAAGATCCCTACTTGTAGTTTGTCTAGAAACTGGTCTATAATTAGGATTATGACAAGTT
TGAATATATTCTACGAAACCGTCAGATTCACAAAAGCCTAGTGGTAAATCATTAGAAGCA
ATAAGACGACATAGACCTTCTCGCTGAATACGAGGATCATAGACGAAATTGCTTATCGTA
TCGTCAGTGTTGAACCTGAGCTGAGTTTGCACAACAGCCGAGCTCGACGTGCTCGTTGCA
TCCGCCTTGTTGTGGGCATCCAAATGCCTCTTCAGGTGGCCGGTTGCTCCCTTGGCTTCT
CCGATTAGCTCCTTCTGACACCTTTTGCACCTTGCCGTCACCTTCCGGCCACCGACCACC
TTGGATATTTCTTCATTGAAATATTCCCATACCGTAGAGGTTCTACGACGAACTCTTTGC
CTCACACCCATGCTGGTGGAGAAACCCGTCCCACTACTAGAATTGGTGTGACTTTGACCT
TCAGGTTTGGAATCGATAATGGGTTCTAGAGAGGGATGATCGGTATAACTGTATAAGGAT
GTTGCATGGGTGGGGGCATGGTAGTGGGATCGGAGCTCGGAGGGAAGAGGTTATAGTCCA
AACCATCAATACCGAAATCAAAGAGTGGGAAACTAGTATGGTCATTGTTCTCCATGTTTG
CGTGTGAGAAATGTGTGAGCTGGGTAGCCCTACTTATAGCAAAAAGATTATATTTTTTGA
ACAAATTTGACCCTCGAACGATCAAATTTTTGAATATATGCATTTTAAAAAACCCATCCT
AATTCCTTCTAAACCCATCTTAACCCACCCTAATCCCTTTAAACCACTCTCCGAACGACT
CTCAACGGCTACCTGCCTCGCTGGCTCGCTCCCCCTTTCGATCGAGGAAACGAGCGTCGC
CCGCCCTCGCTCGCAGCGAACGAGGCGGGCCTACGTGCCCGTGCCGTGCTTCGGGCCGGC
CCCGGCTAATCTTATCGTGCCGGCACGGCACGCGGGCTGAGGGTGGCGGCCTGGGCATGC
CAGGCACGAGCACGATTAGCGCCTGCCAGGCCGGGCCCGTCGTGTGTCGGCCTTGGGTGC
TGCCGGGCCGGTCCGATTAGCACGGCCGTTTGGCATTTGCTGGGACGACCGGCCCACCTG
CCGGCCGGGCCTGGCTGCCGCTGACGAACCTCACTCCGCCCTCCGCCGCCCCTCCTCCTC
TCTCGACAGCCCCAACTCGTCTTCCCCAGCTCCGGATTCCGTCCCGTCGCCGCGCCGTTG
GCGAGCGTATTCGATCCGACCTCGAGCTCAGGCTCAGTGCAGCTTCGCCCGAACTGCCCA
GCCACTAGCACCAACCCGAGCCTAGGCCTGCTGGATTTCGCGCCCTCCGCGGGCTCTCGC
TGATGACCACCGCGCCGTCCGTCTCCCTCTCCCTATCCCGACCACACCCCGAGTGCGCCC
CCCTGATCCCCAGATCCTCGGTGAGGACCGGAGCTGGGGTCGCCTTCCCCGCTCGGCCGT
ACGGGTCGTTGCTTCGCCTGAGGTCGCGTGTCATGTCTGCCAGCGGCGTCGGCTCTCCGG
TGGCGCCTGAAGACCCCGCAGGTGATTTATGTGCCATTGATTTGATTTCTACTCTGTTTG
CTCTGCAGCTTCATGATATGATATGTGCCTAGTTTATCATCATCTACTCAGTGTCAGTTC
AATTTCCCTACCAGCGTCCTCTTACTGTGTACGAAATTTTCAGCCTCATGTAGGTTGGGA
GAGGTCAAGAGGGTAACGAAGGAGACAAATGTGCATGTCAAGGTCAACCTTGACGGCACC
GGCGTTGCCGACTGCAGCACAGGGATACCGTTCTTGGATCACATGCTTGATGTGAGTATG
GTTTTACTCCTTTTTGTCTGTAGTTGTGGGTTCAGGTTTTCTTTATTGACGGCGTATGCT
TGTGGTAGCCTAGGTGTCTTGTTTTCTGACCTTTGGGTTTGTTTGAACCAAAAATGTGAC
ATCTCTTGCATCTAGCTGAAAAAGAATAGTAACTTCTTCATGCAAACAAGGGCAAAACGG
AACTTCGTAATCATAAAATCCCTTGACTCAACTCCAGGAGATCAATGAACAAATACATAA
AGACGTTAAGGAGTGTTCTGAGTATCTTATGGGCAAAGCCTTATATGTAGGATACACCAA
ATTTAGATGTTAAGAGCAGTGGTGGAGCCAGCCGTTGAATGTAGCCGGGGTAAAATTAAC
TATGGTAGCATCTGCTGCCATTTGCCCCATGAAAAATTCTCATTGACCCATATGTTAACA
ACGTTCTTTGTAAGATATTTGTTGGACGAGCCCGGGCAGCCGCCCGGGGTCGCCGGGAGG
TGGCTCCGCCACTGGTTAAGAGCATCTACAACAAGTCCCCCTTGTACCGTAAAAAAATTC
TGGTTTAGGGGGAGTTGGGCCAAAAAAGTGCTCCAACAGTCCCTGTAAACTAGGGCTGAA
AACGGAGCGAATATGGTCGGAGAGTAGTGAAACCGTGGTCGCGACCATATTTTTCTCAGA
TTCTGATACGGAGCGGATAGTGCCCGGATACGAATACCGAGCGAATACCGAGCGAATATG
GTTCAGGATATTTTGTGGGATGTATGTTGTGTTGAAACAGGCGGTGGTATAACTTTTCAT
AATAATATGTTAAATATGTGACATATCTTTACTTTCATAATTTACCAGCAAAGCGACTAC
AAAAATAAATTATTCATAATTTCATACATGCCTCACCTTACAGTTTTTTTTTGCCAACTG
CTAAATAACCTGCCACTAAATTATTTTTTCCATGAAGAACATCTGGGTGCCTATGACAGA
TGTGATTCACAAACAAGCTAGTGCGGCTATGAGGATCAACTCAAGCTGCATATGCACATA
AGCTCGACCTTACTCGATCTTCTTTCAAATATTTCTCTAACTCAGCTTTCTCAATATCTT
GTTGTCTTTACGTATCATACAATTTTTTTGGATGTCCTCATCCATGCCATCAAAGAAATA
TCATCAACTTCCTTATCGCCCACACTAGTTGTTGGGGCACTTGTCGTTTCAGGCTCATTT
GTACTAGACATTTAGGCTTGGAATAACTTATTTACCACATTCGTGAAATCATTAATATGC
TTATCCTAATCACCAACATATATCTTAGACATAAAGAACACTACACGCCTTTACTCGTAC
CCTGGATCAAGAGAACATCCTATTGCCAGAGCCATGTTGGACTTGTCCCAATACTTATTA
TATTTTTATTGCATTGACTTTGCCATACATTAGTAGCAACATCCTTACTATGACACCAGT
CATCAATGGCTAGCTTAATCTCACAAACTTCCACCAAAACATATTTATTGTTGGATGTGT
ACTTGTAGAGAAGAACTCAGCGGCATCATAAAATTTCTTCAGAAATAAAGTTAGATCATG
TGTCTTATCCCACTCCTTTTCTGTTGGAGCAAACTTCTTATAATTACGCTTATTCGCGTA
CATTAGCTTTTCAAATGCCTTCTTATAGTATATTGCATTTTTCAACATTAAGTATATGTG
GAGTTCCACCTAGTTTGACAATCTAGAGACAAATCATTTTTAACATTCAAGTTCTCCTCA
CATTTAGTTTACTCCTCATATTGTAATGGCAGTTCTTCGCAAATGAGATAGTAGTCATGA
AGTTATGGAATGAAGATGCAATCACTCTCAAACCATCTTGAGCAACAATCGTAGTCAATG
TAAGAAGAAAAAAATATTGAGACAAGTTCAACACTGTTCTGGTCACATGATACGTTCTTG
ATCCAAGATACAAGAAAAGGCTTGTAGAGTTTTTATGTTCGAGATATATGTTGGCGATTA
TGATAAGCATATTCCATGCATGTGGTAAATATGTTATTCGAAGCCTACATGTCTAGTGCC
AAAGAGGCCGAAATTGCCAGTGCTCCAACATATGGTGAGGGAACTAAGGAAGTTGATGAT
ATTTTCTTGATGCCATGGATGAGGACATCCAATTTTTTTGTATGATACGTAAGGACAACA
AGATATTTAGAAATTTAAGTTGGAGAAATATGAGGTGCGCTTTCAGTACTACAATGCACG
AGGAGGAGGAGGATGTAAGCCTTGATGGTCAGGTGGTGCCTCAGAAGGATACCTTCCGAT
ATTTGGGGTCAATGTTGCAGAATGATGGGGATATCGATGAAGATGTGAATCA
