Contig Data
morexGenes
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Map Locations of contig_57665 (5448 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57665

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70242 3 1396 bp MLOC_70242.2 Available Available LOC_Os02g12750.1, FRAME:-3, EVALUE:7e-149, 13102.m01395 protein tetraspanin family protein, putative, expressed
MLOC_70241 1 296 bp MLOC_70241.1 Available Available None





CDS Structure of MLOC_70242






CDS Structure of MLOC_70241






Contig Sequence (5448 bp)

>contig_57665 5448 assembly3_WGSMorex_rbca.fasta
CTAAGGGGCACTAGATACACTTACAACTCAAAAAAAAAATGAAACTAAGAAAACAAAAGT
CTTCACGCTTCAAAGTCCTCGCATCAATATCTTCAAGGACAAACCAATTTCCTCGCTTTC
AAAGTCTTCGAGGAATTATCAAAGTCTTCAGTTGAGGACAATCATTTTTAGGGGTTGATA
TTCTTCAAATAACTCAGACTCCTCAACGACTTATAGAGTCTGTGTACACTCACAAACGCA
TTAGTCGCCTATCCTATAAGTCTTCAATGTACCAGAATCACTAAGGGCACTAGATGCACT
TACACTAACCTCTTCTAGCGTCACTGCTTCGCGGGTGAAAACCCTAACTTGGGGGAGGGG
GGGGGCGGCGTCGGCGCTCAAGGCATCATGTCCTTCCCGAAGGCTTCGTCGAGAGAACTT
TGTGATGGTGGGAACCGTTTTGGCTCATTGGCATGTGTAGATAGCATGCCCATATTCCTG
CATAGGGCATCTATTCCGTGTAAAATACTAGATCCGAGTCTCTCATATCAGAATATAATG
GAGACTATGGTGTCGTTTTTTCTCCCAAGGGGATTGTTTTGGAGGAGTGGTTCATTGGAG
GGGGCAGCGGGTGGGAGCAATGTTGCATCAACTGCATTGAAGACGACGGAGCTCGACGAC
GTGGGGCAATGGAGTCTCGGCATTGGACGCAGGGTTAATTGATGTGCATGGACTGGTGGC
ATTGTGTGACATCATGATGACATTGACGACACATGGACTTGGCAAGGTCTATGCAATGAT
CCCTACTGGTGATTGGATAGCGGAAGATGACAACAATGGATCCTAGAGCACACCCATGCA
GTATGCGATGTGGAATGCCTAAACTAGTTGGAACCAATTAATGCTCTCAGCATGCGGGCG
GGCAATTTCTCAAGTTCATTGGACTAGATGATGTTCTTTGTATTTTTTTGTTATACTCTG
TTGAATAATTTAATAAAGATGATGGTCTGAATTATTTTAATGCAAAGGTCGAGGGTAATC
CTATTTCTCTCAAATGATAGGTGTCATACGGGTAACAGGAAGCACTCCGGCACTAACTTT
CTTACAATGAAAGCTGACACCTGAAAAGAAAAAACAAACCCAAAATAACTGAAACTTGCG
ATTCAAAAAAATTGCCCCATGTCATTAAATTTGTCATAAAATACGTTCGAAGTTGCCATA
TGTTGGTATCACATATGTGACACTTGTTAAGGTCCTGAGTAGTGCTTGGTGCCACACATG
TGGTACCTATCATTTGCAAATAAAAATCATAACCATAAATCTGAAGAACAACTCTACTGC
ATATTACTAAAACATTGACATCAACACCAACAGCGCATGCGTCTCGCTAAAATTCTCCAC
GAAACATGCATGGGCAACCATAAACCAGGAAACATTCCCTACTAGCTTACTACCAGGTAC
CAAGCTACTAATAATAATACTGGATGAAGCAAACATATTACATGCGGCAAATCGGCGATG
GCGGTCCTGAGTGATGGGATCGGAATCACCACTTGTAGCGGCGGTAGATGGCCTCGGCGT
GCGCGTTCTTGTAGGCGCTGCAACCGATGAGGTAGAGGAAGAGGAGCGAGACGGTGGCGA
CGACGAGCGCGATGTTGGCCTTGTGCCACTGGCTCCGCAGCGCCGCCAGGAGGCCCGCGC
GGCACGACTCGCACTCGTAGCACAGCTGCGCCGGGTCGTTGCTCCACAGGCCGCAGTCCG
GGTCGGCCGCGGGCCGCGCCGGGTTCGTCCACACCGTCGGGCTCACGTACCCGAACCCGC
ACACCGACGGGGGCTTGCAGCAGCCCGACTGCGTCCACACCACACCACACCACACCACAC
CAGAAGCTCCGTCAGTTGTCTTGTCAGAGATTTTATGCTAAGAAATCTCTAAGTCCATGT
TTCAGCGTAGTTATTATGCTAAGAAACTTTACAGGAATCAGCCATCCTGCGACGTTCACG
CATCCATCTCCGTCAGTGGCTGGATCAGAAGCATTTTTCTTATCTCTTAATCACGTGAGG
TGGAGTTTCCTAGAGATGGAGATGGATGCATGAACGTCTGAGAGACCAAAGCTCCGGAAC
ACGCGGGGGCAAACAGACACAGACAAACCCTCCTCACATGAGGACATCGAGATGCTGCGT
GCGGCCACAGCAGAACCGAGCTCAATCAAGTGCCCTCCACACCGGAACTAAGATGATAGC
AGGAGTAATTAACACACGACTCTAGAACTAATCACAAGCCCCCACGCACCGGCCCATGCG
ACCCTTGTCCTCCGCAATGTCCCGTCCATTTCTTGTTCTTGGGAGTTGGGACAGCAACTC
TTTCAGGGGATAGAGTGAAAAGTAGCATGGACGTACCATCAAGTAATTCCTCATTAGAGG
AAGTAGAATAGAGCTAAGTCCGTTGGCTATAAAAAATAAACTAATATATTTTGGTTTAGT
TAGAGGAAAGAAAAGATGAGAGAGAAGGTACGCAGGCTCTCTAGCACGTGCTCTTAGGCA
TTTTGTAAGTATAAAAGGTGAACCATATAATAAAGAAGTAGTACACTTTTGCAATGAACN
ATTGTACATGTTGGCTATAAGATGGACTATAGATGACATGAAGCATTTTGTGAATATGAA
AGGTGGACCATATAATAAAGAAGTAGTACACTTTTATAATAAACTACTCCCTCCGTTCCT
AANNNTAAGTCTTTTAAGCAATTTTACTAGATGTCTACATACGAAGCAAAATGATTGAAA
GTACACTCTAAATTATGTCTATATACATCCGTATGTGGTCCATTAATAAAATCCCTACAA
AGACTTATATTTAGGAACGGAGGGAGTATTATACATGTTGGCTATAAGATGGGCTATAGA
TGACATGGCAATGGCTTATAGCCAGCGGCTGGCTATACTATTGTACTTGCTCTTACGTAC
TCAATTATACTATTATCAATCTAAATCAGTGTAAGATTTGTTCCCGAAAGGGATTAATTA
CATGGGCCTACGCGCGGATTCCCCTCTAGACCATTTGGCGTTTTTGGCACTTGAAGAAGC
CGAATGGCCCACGTCACAGTGACGGTGAACAATGGCCACCGCTTTTCTTTGTGCCCTGTC
AGAAAGTTGCCACCGGATGGATTCCCCTCCTCCTCATCTAGTAGCATCTCCGAGGGCCAA
GATAACCTGATGCCCGGATCCTTCTAAAGCACATCTCAACATCTTGTTTCGACTACAAGT
GTCACTACCGATGCGTTTGCTCACATCATCTCTAGTAGTATGGCAACAGTTTCAGTCGAA
ACAGTACGACGATTTTGACGTGTTCATTTTGTGGAATCCTATGTTTGAGGAGGTGGTATA
TATGATAAAAATCTATGGCTAAACAACCGACAGTAGAAGTACTAAAAGCTTCTTGCAGGC
TGTAAGAAGCAACAAATGTAATAAAAATGTTAATCCTAGCTAGTTCAAGTAGAATACATG
GTAGCACCATTCAGATTCAGCTAACACTCAAATATACTTGTCCTGCAAAAAACAACTAAA
AATACTACTGTATATCGACGAGAAGGACTGGGGGTTGGGTTGATGGATAATACTGTACGT
ACCTGGAGCGGCGTGAGGTGGGATTGGTAGAACTGGTCGGCGGTGACGAAGCTGGCCTGT
CGGGCGAGCTTCTTGCAGGTGTCAGAGACGGCGATGCAGGACCTGATCCCCTCCCACCTG
GCGGGGTCGTCGGAGACGTACCCGCGCAGCCACATGGAGAAGCCGTCGAGGCGGTACTCG
TCGTACTCGCGGCCGAGCACCGGGTAGGCGCCGGAGCCGCGGGTGACGGCGAAGGCGAAG
ACGAGGAGCGCGATGAGGAGGGCGATGAGCGCCCCCATGGCGAAGAGGTAGAAGGCAAGG
AGGCGGCGGCGGTTCCAGTAGGCGCCGACGAAACCCGCCAGCGCCGCCAGCAGGATGAGC
CCGCCCAGGATGGCCACTGGCCAGCGCGCCAGCCGCGCGCACTCCTCCCCCTGAGCCGAC
GCGAACCAGACGCCCGAGGCGATGACGGGGACGGCGCAGATGAGCGCCATCAGCGTCACG
CACGCCGTGATGTTGTTGCTCACCGCCATGGCTGGAGGCTCGCCCTCGCCGCTGCCACTC
TCCCAGACCGTGCCTGCGCTGTGCTGTGCTGTGTGTTCTTGACGCGGCGCGGGGTGTCTC
GTTTGCAGTGCAGGCTTCCTTCGTGGGTGGGGGATGGCATAAAAGGGCTTTGCGGTTTTG
CGGAAAGGTGGCGGGGACTTACTGGGGCTGACACGCTGGCCCCGCGAGACCATGTGTGAT
CCCCACTGCCGACGTATCGTGCGCCTAGCAGCTTGTCAGCGTGTTCAGCGCGTGTGTGGG
AGACTGGGATTGTTTGGACGAGTATGGCATGGGCATGGTTGTTTTGCTTTCACATGCCAC
GTCGATCCACTATAGCTTAGGAACCGAAAAAGAGATGATTTTTTTGTGAAAGTTGAGAGG
AAAAAATATCAAAAGAAAAAAAGACTAGCAGTTCTATATGCACAAGTGTACCAACGAGGA
TGGTGTGTGGCCTAGTATAATGGCCGTATGATGAATGACAACCTCATCGATCGATGCTAA
AGAAAGACATGAAATCCTTTTGGTTCTTTTCTTTTCAAAACAAGATGCACGGTGGCTCGG
CGTGACAGAGACCTTCCCCTGGTACCTACTGTGAAAGAATAAAAGCAAATGATCGAAGAG
TCGTCTCATTAACTAAAGATGAGGGTATTTATACCCTAGTATAAAGACGGTAATTACATA
GACGGTAAGTGACGGTTGCTAAACTCCATAACCGACTTAAGCATTGATTACTAGAATTAA
ATTAATTCTTAATACTCCACTTAATCTATGCTTGACTAGGTGAATATGCACCATCTTGAT
AGAATCCTTCTAATATATGTCCGCCTTGAGAATGCTCAACATCTTCATCTTGAGAAATTC
TTGTATAGTCTTTACAGTCTCCTCCAAAAACCCCGTGGAAAAAATATAAGGAGAATAGTG
TAGATATGTTGCTAAAACTCCTTTAAACCGAGTGGGAAAAATAAGGAAAAAATTATGCAA
CATATAATGATTATTGTCTCTTGATAACTCATATGAAAAAAACCTTTGAAAAAGGAGAAA
ACTCATTGAGAGTTTAGAGAACAATTAATATGTCTTAAGTACTTCCTTTTAAAAAAACAG
ATAGGAAAAATAAAAAGTATGACATATGATCTTTGAGAAGATACTGCCTCGTTAAAAACC
ATTATGAGAAACTTTGAGAGAAAACTCATAAAGGAAATCTGATATGCCATTGAAAACTCC
TTTAAACCCCAGTGGGAAAAATATAAGGAGAAAATGATATGGCATATATGGATACTTGTG
TTTATATTGTCTCATTAAAAACCTTTTATGAGAAACCATTATGGGAAA