Contig Data
morexGenes
Links



Map Locations of contig_57558 (6887 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_57558

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_70189 1 1340 bp MLOC_70189.1 Available Available LOC_Os10g40720.1, FRAME:-1, EVALUE:3e-156, 13110.m03775 protein expansin precursor, putative, expressed





CDS Structure of MLOC_70189






Contig Sequence (6887 bp)

>contig_57558 6887 assembly3_WGSMorex_rbca.fasta
AGTTATTACGTGATGGGACAAAAGTTATCTTGTTCCGAACCAAGTACTAAGAAATCAGTG
GGGTACTTGACCTTTCTGCACAAGACTTCAACATCCCTAGCTCTTCTTCAGCCGACCAAT
CACCAGCCTCTCGATCCTTGGAAGTGCTCCCTCCAAGATGATGATCCCCTTGTGTGCAGG
CCCCACTATAGGTGTCAACTGTCATGGGGTTGGCACGACAAGTGTAATCATTGGAGAACT
TAGTTGCAAGTTCATAGCTACGAGGAGAAGCCTTGGATTGGGTTGATAGGAAATGAGATA
AGCGAGTTTACCCAGGTTCGCCCCCTCTGGTAAGGTAAAAGCGTACTCTTGCATGTTTGT
TTTTCTTATTGGATGTGTTGGTCTAGATTAAAGGGTGTTGTTTCACTACCTATGGATCGG
GAGCTTCTAACTTGATCTCTCCCTACTAGAATAACCTAGGAACCTTCTTTGTATAATAAG
ACGGCTCCTTGGCTTCCAACAGATTCCGGGTCCTGTCCGTGAACCAAGTCCTACTCTAAA
TATTTTTTCCCTTCCAAGTAAGAAGGCCTTCGGCTCGTATACGAAGTTCACGAAGTCGGG
GCTTACCAGCCCTCACCGGGTCTCATTTGGAACTGGCGGCGCATTAAGACCCGACCCACG
TGTAGTCCGGGTCTAGTGAGTGCATAATATCCTCAACACCACGTTTGGACATAGAAACTG
ACATATATCGAAGACATTTGAGGGTCAGCTTTGAAGATGTCCTTAGGGTTCAGAACCGAG
TAGATGCAATAAATAATTGCGGCATGCATTTGTTTCCCATGTCCACGCTACTCCAAACGA
TAATAAACATGAGGCACGGTTGGAGTATAATGTTCTGCCCTCTACCATAATTTAGAGTTT
CGGACTTTTGTAAATACTCTCTCTGTCCCAAAATAAATATCGCAAATTTAGCATTAAGTT
AGTATAAATTTAGTATTAAAATAGTGACAATTATTTTGAGACGGAGGCCCCACCCTGCAT
TTTGTAAAGTAGATAATTGCTGGCGAAAATAAGCATTTTTTACCGAAGATATTGATGAAA
ATGCTTATTCACTTCATTTTCTTCTTATCGCGTTCACGGGTCTGCAGATGATGTATCTTC
CCCCACCACCGAAAATGCACATTGGCAAGTGGCGCAAGTAAGAGCGCACGTGAAGCTGGC
CCATTTTTCTTCGGCAAATGCGTGTGTCGATCATTGTCCTCCGACTCCGAATCCAGTTGG
TTGTTCAAACATTCCATCCACCGGCGCACATAGAAGGAATTGTCCAAAACCAGGCACGGA
ATTTGACCGTAACTATTCAAAAGAAAGAAAAAAAGCTAATTAACGCACCCGGAAGGAGGA
CAGGAATTCAGCCCGTTTGCGCAGGATCGGCGCCCCAGCGCGGTGCACGTTCGCGCGCGG
CGGGCACCGTACCGTGCCGCGGCAAGCGGGCCGTTCTCGGCCGCACGGCTTCGCGTAGCA
AAAAGTTTATTTTAAAACCTTAACTCGTAGAGGTTGAACAAAATGAACCCTCACATTAAA
TTTTTTGTCGATTGTATTCTGAATTATATAATACTGATTGAAATTAAACTCTGAGATCAT
CTGCTAAACAGAGATTAACAACGTGACTGGGATTGCTGACATTTTGGCAAACGACATACA
ACCTGCTCGTTGCTGGGCCGGCCCGCCATAGTTTTTGTTTCGGTTAAACGCCAAAAAATA
AATGCAAACGGGTGCACAACCTGTTCCCGGTCGGCCGTCGTTAGTTTTATTTTTGAAATC
GCACAAGGTGGCACGAAGAATCGAACAGAAGACCTCTTGTACCCCACAGCCGAAAATAAC
CACCAAGACTCCACCTCTGTTCGGTCGGTAGCTACCTTTTTCCTTCTTTGTTACTCTTTC
TTTTCTTTTTTTTGTTTCTTTTTTTAAATTTGTGAACTTTTCCAATTTCACAATTTTTTT
AAATTCCATGATATTTTTGAATGGTCGAATTATTTTAACCTATATAAACACCAGTGGTCA
TATTCGTAGGATATTATTTCGCCATCTTTGGTGTGTTGACACAAAGCATTTCTGGAAGCG
CACGGCGTATGTCCCGTGATGCATGTGCTCGTTGTAATAGGTTCGTGGAATTGAGAAAAG
TTGGTAGATTTAAGAAAAATGCACGACGAGCTTAAAAAAATTGAAAAAGTTCTATACATT
AGATAAAAAAGAAAAAAAACTGTCTAAGAAGCTTGCACGGACAAAATAATGTATTCATGA
TAGGTGGGGTTAGCTGATTGGTTTGTGCACCTTACACTGAAAGAAGAGGTTGCGGGTTCG
AATCATCTTGTGCATGCAGTTTTTAGGAATGTAATAGAAAAAAAGATAACAATATTTTTG
AGAAAAAGGGTTGACCCGATGCGAAGACGAGTCTGCGTTGTGGTAAGGCCCACCAACTAA
CAAATCCCGATTGACATTTGCCACATTACCGTTTTTATGTTTCAAGGTTCGATTCAGACC
AGAATTATATAGTACATGATGCAATCAACGGGATGGGGATTTTAACATGAGAGTTCGTTT
TACCAAACCTCTATGAATTCAAGGTTCAAAATGGGCGTTTTCCCTTCTCGTAGCACATTA
CCACACGATGACTACGGAGATCGAGTACATGGTGGGGGATGGATCGCTCGCCGGGTGGCT
GAAAGCTCAGTCTGAGACGGAGCCGGCAAGGCGGCAACGGTGGGTGCGCGCCGGCGGGCC
CCTAAAATCTGGTGCAAGAGCTCGGCTAGCGACCTCCGGCCTGCGTGTCGCGAGTGGTTC
GATCGTACGTACGTGGTCGTTCCTTCCACCGGCGGGCGGTCGTGGCCCGCACCTCACATG
CAGAGAGGCGGGTAGGCGACGCAGCCGTCGGCATCCCACTCCTCGCCCCCGCACATGCGC
CTGAGCAGTCCGTTACTTTGTCCCTTTCCGCCTGTTAACTGCTCGGAGAAACGATCCATG
CGGGTCAGGTGGAAGGTCTCATCCTCCTTTTTCATGTTCTTCTTCTGTTTGTCTCGGAAA
AGAGAGAGGGCATCGATGAATGGTAGGGTTTTTTTCCAGTCTTTTCCTCGCCTTATCTTG
TACACCATGTGTAATTAGGTTCAACAGATTGTTCATGACATCAAACCATCGTATGATACG
TAACTTTCTACTCCCTAAGCTCCATAACACAATCCCCGCAAAAAGAAAAACGGAAGGAAT
ACATATGGAGTAGTTTAATTAGACTACATGACCAAAGAGTAGCTCGGCGACTGGGAGAGT
TTCGCGCCAGTATTTACGGCGACGATCCAGTGGTCTCTAGTAGAGTAGCACGCTAGTTAA
AATCAGTCTGCACCTCCGTTTGCATGCTCTTCTTCCTCTTCTTCATGCGATTGGGAGAGT
TTAGCGCCAGTATTTACGGTGACGATCTCTCTAGTGTAGTAGTTTAACAGCTTTGTTAGA
AAAGGAAAGACTAGCTTAGCTAGAGTGAACTTTTAGGCGGCGACGTTGCCGGCTCTCGTG
TAAAAGTTACGAATATCATTCACTATCATTAGCAAGCTAAGACTGACGGTTATAGCACGA
ATTGGTTAGTGGTTACTACCATGCATACGGAAAGAGAAAGCTTTTTGAAACAGAAAGACA
TGAGCTGTGGGGATTAGCATCCTTTGCGTTCGATAGACGCACTAGCTAGTCGGTGGTAAC
TGACATGACGCAGACATACTCGACTGTGTGCTTTCTTTGGTCGTTGCAAAAATTATGACG
TACCGGCCTTTCCAGGATCGTCAAATCTAGCGGAACACAGTGGAATTTCCACACTGCCCG
TGGCCGTACGCTTGTTAGAAAGTCAGGATCGAATTCCTGGCGTTCATTTAATCTTTGGCG
CGCATAATCAAGTTTGATAAGTACCAGGGCAATAAGAGCTCATGATGCATGCTACGTACT
GGCAGTACTGATGAGAAACCGAAGGAGGGACGAGAGTTAAGCACACACAAACAGTAATAA
CTTATGATCTGCTTACACACTGGTACAGTGACGGTGGGCGCGGGAGAGCACATGCAAAAG
TGCCTCTCCTCCATAGCCCACCGACGTATTCAAGACACACATGCACGACGGCGCCTACAT
GACACCCGACGACCCAACACCTTAATCAAAAACATCCTCGGTAGTACCCATGCAAAACGA
TCCGTGATAGTACGATACCAAATCTAGCCAATGTATGCATATGATTCCAAATGATGATGA
GTTCAGCAGCTTCAGCTGTACTGAACGATGGAGCGGTAGAAGGTGCTGGGCTCCCAGTTG
GCCGGGATGACCTTGTCGGCCACCAGCGTCTTGCCGGACTCGTTGGTGATGCGCATGGAG
AAGGGCGCCTGGAGGCGGTGGCCGGAGTCCAGCCGCCAGATTGATCCCCACGACTCGCGC
ATCGGCGTCCACGTACCGGAGTTGGCCTCCATGAGGTCCACCTGCACCACGTCGCCGTCG
CCGTCCTCGTACTCCACCAGCACGGCGAAGTACACCGGGTTCGACCCCTGCTCCACGTGG
AAGGTCACCTTGAGACCAGGGAACTCGCACGGCACTCTGCACCAATCATCATCAACAATC
AGCAAACCATGTGCAGTTGTAACTTAGTTTGCAACCGAGCCGGATCGACGGCAAATAAGT
GTGAGGCGACGGTACTGAAAACAGAGTAGTACGTGTTCGCTGCGAATCTATTTGGGTCCC
AGTTAAACCGGTCGTTGTCGTGAAAGTTTTGTTGGGCAAAAGCACTAGTTTTATAGTATG
ATTCTGTTCATCGTTCTGGTAGGGCCAGATAGGATTGGTGCAACGAATGATGAAATGGCA
CCGACCTCTTGAACTGGATGTCGATGATGCCGGAGTGCCGGAGCTTCTCGCTGAGGCCGG
GCTTGGCCATGGCGCCGAACGCGGTGCCACTCAGGTCGAAGTGGTACTTGGCAACCGGGT
AGTAGTTCATGTCGGTGATGACCACCGTCTCCGGGTTGCCGGAGCAGGACTGGTCGTTGG
TGCACCGTATCTGAAAAAGGCAAAAGAAAACGATCAGAAATCAAGATTAACACTGTTTCA
CCAGCTCCATTTCCACCACGGCAGGGGCAAAGCACCACCACCAACAACAACCCTCGTCGT
GGAAAAGGGTAAAAACCATGGCAAATCAACGAGCTAGTCTAGCTAGCTACCTGGTAGCAG
GAGCCGCATCCCTTGCCATCCTTGAAGATGGGCTCGTTGCCGCACGATGTCATGGAGGAG
AAGGGGTACTGGTTGGTGTTCTTGAACCCGCACGCACCACCTGAATGCACATCGATCACC
GTATGTCATTACACAAACGATCAATTAAGCGAACGCCGCGGCGCCGTGCATGCACCGGCG
CATACGGGTGGACGTACCGTCGTCCATGGGGCCGGCACCCGTGGGCGCGCCGTACCAGGT
GGCCCTGGCGTCCTCCCAGTTGGGGTCGGCGGTGAAGGCGGAATCGTTGAAGGTCCCGGC
GCCGGCAGCGGCGTAGGTGACGAGGAGGGAGGACAGTGCAACGAGTGCAACGGCCTTAGA
CGAGAGAGGAGCCATGTCAAAGCAACGCTGCTTCTTCAGGCTTGTGGGGGTAGTGTACCA
GCGCACTGACCAGGCCGGGTTGGAAGGCTGAGCTATGCTTTGATGCTCTGGGAGTAACAT
ATTGCCGGGGTATTTATAGGCAGGCGCGGTGCCGGGCGACGCGATCGCCATCCACGGTTG
TTGCACCCGACGACGTGCTTTGTGTAGTAGGGGTCACATGGCTACGGGAGCAAATCAGGG
GAGGAATGGCGGGCGAGGCGATCACTTCGTGTTGCACTTTTAGAAAGAAAAAAAAAACGT
GAAATCACGGCTTGGCAGTTACACATTGCCTGTTCTTGTACACACTCCACACTGCGTGGT
GCGCACCTGCCCTGCCCTCGCCGATGCTCCGAGCTGTGTTCCATTTCTGCAGAAAGAGAT
ACGCACGGTACCAATGGAAAATCGTATTCTCTTTCAGGAATGTACAGCTAAGTGTTGCCT
TTGGCGATGATGCCGCGTTAGGAAGGAGAGATTCGGGCGGGAACAGCAAGTTTGCGTTAC
AATTAAAGGAGCGTGGACGTTGGCCTGACTGACTCTTGTTGGAATCAATCATCGGAACCA
ACCGGCTTAACAGGCATGTCTCTGCAACCACCGAATCATGTACGAAGTTGCGTAGAGGTA
CGTAATTGACCCGCTGCGGATTCGTTGGGGAAAAAATAAGGGCACTTGCGATTTCATTCA
CGAGCACAATGATACTGCTACCTGATATGTGATTATATACCATCCATCAGTCCATGCTGG
CATCCGCTTAAAATATTCCGGGATGCAACCGTCCTGAGTTTTTTGATAGATGTAGTAACT
GCACTGAATATTATTTTTTTAGCAAACTAGCACCCCTTCATATAGAGGGGCGGACCTAGA
AACTATTTTAAGTGGGGCAAAGAATAGGAGTGAGGGCACATTTTGTAGAAATTTACATAG
TTTTGACAAAAAATTCTAAAATTTCAAAGAAATATAACTGGAGTTTCATATTTTGAGTGG
GGTCCTAGACCCCCACTCCCATGAACGTGGGTCCGCCCCTGTTCATATATCTGTACTATA
AAAAGCACGAGAGGGCAGATCCAAATAGAAATATTAATCATCGGATTGGTAATCTAATGG
TTATTAAGCACACTAACGAAACGATGTTAATGAAAATTAACGATTTATGTCCCGACTCCT
CACCCACGTCACCGCTGCGCACCTCGGGACAAAAAAAAAGAAAACCACCCCTCCCCCATG
CTACCCCGGCGGTCCCCGACACCGCCGCCACCGCCGCCTCGCCCTCG